RNA–Protein interactions for RNA: ENST00000356906.7

NBR2-201, neighbor of BRCA1 lncRNA 2, humanhuman

TSL 1 (best)

Gene NBR2, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR2-201ENST00000356906 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
NBR2-201ENST00000356906 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
NBR2-201ENST00000356906 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
NBR2-201ENST00000356906 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
NBR2-201ENST00000356906 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
NBR2-201ENST00000356906 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
NBR2-201ENST00000356906 CUX2O14529 1486 aa12.42□□□□□ -0.42
NBR2-201ENST00000356906 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
NBR2-201ENST00000356906 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
NBR2-201ENST00000356906 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
NBR2-201ENST00000356906 CUX1P39880 1505 aa12.4□□□□□ -0.42
NBR2-201ENST00000356906 PSEN1P49768 467 aa12.39□□□□□ -0.43
NBR2-201ENST00000356906 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
NBR2-201ENST00000356906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
NBR2-201ENST00000356906 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
NBR2-201ENST00000356906 SYNJ1O43426 1573 aa12.36□□□□□ -0.43
NBR2-201ENST00000356906 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
NBR2-201ENST00000356906 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
NBR2-201ENST00000356906 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
NBR2-201ENST00000356906 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
NBR2-201ENST00000356906 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
NBR2-201ENST00000356906 TOP2BQ02880 1626 aa12.33□□□□□ -0.43
NBR2-201ENST00000356906 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
NBR2-201ENST00000356906 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
NBR2-201ENST00000356906 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
NBR2-201ENST00000356906 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
NBR2-201ENST00000356906 EMP3P54852 163 aa12.29□□□□□ -0.44
NBR2-201ENST00000356906 EEA1Q15075 1411 aa12.28□□□□□ -0.44
NBR2-201ENST00000356906 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
NBR2-201ENST00000356906 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
NBR2-201ENST00000356906 SOGA1O94964 1423 aa12.27□□□□□ -0.45
NBR2-201ENST00000356906 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
NBR2-201ENST00000356906 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
NBR2-201ENST00000356906 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
NBR2-201ENST00000356906 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
NBR2-201ENST00000356906 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
NBR2-201ENST00000356906 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
NBR2-201ENST00000356906 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
NBR2-201ENST00000356906 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
NBR2-201ENST00000356906 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
NBR2-201ENST00000356906 HRCP23327 699 aa12.22□□□□□ -0.45
NBR2-201ENST00000356906 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
NBR2-201ENST00000356906 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
NBR2-201ENST00000356906 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
NBR2-201ENST00000356906 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
NBR2-201ENST00000356906 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
NBR2-201ENST00000356906 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
NBR2-201ENST00000356906 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
NBR2-201ENST00000356906 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
NBR2-201ENST00000356906 TDRD9Q8NDG6 1382 aaKnown RBP12.19□□□□□ -0.46
NBR2-201ENST00000356906 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
NBR2-201ENST00000356906 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
NBR2-201ENST00000356906 G3V3G9 751 aa12.18□□□□□ -0.46
NBR2-201ENST00000356906 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
NBR2-201ENST00000356906 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
NBR2-201ENST00000356906 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
NBR2-201ENST00000356906 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
NBR2-201ENST00000356906 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
NBR2-201ENST00000356906 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
NBR2-201ENST00000356906 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
NBR2-201ENST00000356906 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
NBR2-201ENST00000356906 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
NBR2-201ENST00000356906 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.47
NBR2-201ENST00000356906 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
NBR2-201ENST00000356906 CHD1O14646 1710 aa12.08□□□□□ -0.48
NBR2-201ENST00000356906 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
NBR2-201ENST00000356906 KIF27Q86VH2 1401 aa12.06□□□□□ -0.48
NBR2-201ENST00000356906 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
NBR2-201ENST00000356906 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
NBR2-201ENST00000356906 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
NBR2-201ENST00000356906 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
NBR2-201ENST00000356906 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
NBR2-201ENST00000356906 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
NBR2-201ENST00000356906 ERBB3P21860 1342 aa12.01□□□□□ -0.49
NBR2-201ENST00000356906 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
NBR2-201ENST00000356906 MICALL2Q8IY33 904 aa12□□□□□ -0.49
NBR2-201ENST00000356906 IGF1RP08069 1367 aa12□□□□□ -0.49
NBR2-201ENST00000356906 SYNJ2O15056 1496 aa12□□□□□ -0.49
NBR2-201ENST00000356906 CUL7Q14999 1698 aa12□□□□□ -0.49
NBR2-201ENST00000356906 KIF21BO75037 1637 aa11.99□□□□□ -0.49
NBR2-201ENST00000356906 CEP162Q5TB80 1403 aa11.98□□□□□ -0.49
NBR2-201ENST00000356906 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
NBR2-201ENST00000356906 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
NBR2-201ENST00000356906 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
NBR2-201ENST00000356906 SOX12O15370 315 aa11.97□□□□□ -0.49
NBR2-201ENST00000356906 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
NBR2-201ENST00000356906 GRIN2AQ12879 1464 aa11.95□□□□□ -0.5
NBR2-201ENST00000356906 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
NBR2-201ENST00000356906 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
NBR2-201ENST00000356906 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
NBR2-201ENST00000356906 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
NBR2-201ENST00000356906 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
NBR2-201ENST00000356906 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
NBR2-201ENST00000356906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
NBR2-201ENST00000356906 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
NBR2-201ENST00000356906 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
NBR2-201ENST00000356906 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
NBR2-201ENST00000356906 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
NBR2-201ENST00000356906 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
NBR2-201ENST00000356906 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms