RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
CAPN3-203ENST00000349748 PDE4AP27815 886 aa14.22□□□□□ -0.13
CAPN3-203ENST00000349748 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-203ENST00000349748 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
CAPN3-203ENST00000349748 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
CAPN3-203ENST00000349748 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
CAPN3-203ENST00000349748 EIF4G3O43432 1585 aaKnown RBP14.18□□□□□ -0.14
CAPN3-203ENST00000349748 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-203ENST00000349748 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-203ENST00000349748 CCNB3Q8WWL7 1395 aa14.17□□□□□ -0.14
CAPN3-203ENST00000349748 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
CAPN3-203ENST00000349748 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
CAPN3-203ENST00000349748 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
CAPN3-203ENST00000349748 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
CAPN3-203ENST00000349748 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
CAPN3-203ENST00000349748 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-203ENST00000349748 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
CAPN3-203ENST00000349748 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
CAPN3-203ENST00000349748 RGS3P49796 1198 aa14.13□□□□□ -0.15
CAPN3-203ENST00000349748 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
CAPN3-203ENST00000349748 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
CAPN3-203ENST00000349748 TCERG1O14776 1098 aaKnown RBP14.11□□□□□ -0.15
CAPN3-203ENST00000349748 PRDM4Q9UKN5 801 aa14.11□□□□□ -0.15
CAPN3-203ENST00000349748 MRS2Q9HD23 443 aa14.1□□□□□ -0.15
CAPN3-203ENST00000349748 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
CAPN3-203ENST00000349748 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
CAPN3-203ENST00000349748 ARXQ96QS3 562 aa14.1□□□□□ -0.15
CAPN3-203ENST00000349748 SKAP1Q86WV1 359 aa14.09□□□□□ -0.15
CAPN3-203ENST00000349748 POGKQ9P215 609 aa14.07□□□□□ -0.16
CAPN3-203ENST00000349748 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
CAPN3-203ENST00000349748 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
CAPN3-203ENST00000349748 CUL7Q14999 1698 aa14.05□□□□□ -0.16
CAPN3-203ENST00000349748 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
CAPN3-203ENST00000349748 ADAMTS12P58397 1594 aa14.03□□□□□ -0.16
CAPN3-203ENST00000349748 CLCN1P35523 988 aa14.03□□□□□ -0.16
CAPN3-203ENST00000349748 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
CAPN3-203ENST00000349748 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
CAPN3-203ENST00000349748 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.16
CAPN3-203ENST00000349748 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
CAPN3-203ENST00000349748 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.17
CAPN3-203ENST00000349748 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
CAPN3-203ENST00000349748 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
CAPN3-203ENST00000349748 PHLDB1Q86UU1 1377 aa14.01□□□□□ -0.17
CAPN3-203ENST00000349748 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
CAPN3-203ENST00000349748 MS4A1P11836 297 aa14.01□□□□□ -0.17
CAPN3-203ENST00000349748 PRKRIP1Q9H875 184 aaPredicted RBP14□□□□□ -0.17
CAPN3-203ENST00000349748 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
CAPN3-203ENST00000349748 FHOD3Q2V2M9 1422 aa13.99□□□□□ -0.17
CAPN3-203ENST00000349748 LRRC9Q6ZRR7 1453 aa13.98□□□□□ -0.17
CAPN3-203ENST00000349748 PDCL3Q9H2J4 239 aa13.98□□□□□ -0.17
CAPN3-203ENST00000349748 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-203ENST00000349748 JPH4Q96JJ6 628 aa13.97□□□□□ -0.17
CAPN3-203ENST00000349748 TONSLQ96HA7 1378 aa13.96□□□□□ -0.17
CAPN3-203ENST00000349748 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
CAPN3-203ENST00000349748 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
CAPN3-203ENST00000349748 PANK2Q9BZ23 570 aa13.96□□□□□ -0.17
CAPN3-203ENST00000349748 L1TD1Q5T7N2 865 aaKnown RBP13.95□□□□□ -0.18
CAPN3-203ENST00000349748 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
CAPN3-203ENST00000349748 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
CAPN3-203ENST00000349748 CHD1O14646 1710 aa13.94□□□□□ -0.18
CAPN3-203ENST00000349748 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-203ENST00000349748 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
CAPN3-203ENST00000349748 CENPJQ9HC77 1338 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-203ENST00000349748 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
CAPN3-203ENST00000349748 KIAA0586Q9BVV6 1533 aa13.91□□□□□ -0.18
CAPN3-203ENST00000349748 CHMP4BQ9H444 224 aaKnown RBP13.9□□□□□ -0.18
CAPN3-203ENST00000349748 ZHX1Q9UKY1 873 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-203ENST00000349748 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
CAPN3-203ENST00000349748 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.18
CAPN3-203ENST00000349748 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
CAPN3-203ENST00000349748 CFAP43Q8NDM7 1665 aa13.89□□□□□ -0.19
CAPN3-203ENST00000349748 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
CAPN3-203ENST00000349748 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-203ENST00000349748 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-203ENST00000349748 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
CAPN3-203ENST00000349748 NUP160Q12769 1436 aa13.87□□□□□ -0.19
CAPN3-203ENST00000349748 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
CAPN3-203ENST00000349748 ARID3AQ99856 593 aa13.86□□□□□ -0.19
CAPN3-203ENST00000349748 GZF1Q9H116 711 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-203ENST00000349748 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
CAPN3-203ENST00000349748 TPM2P07951 284 aa13.85□□□□□ -0.19
CAPN3-203ENST00000349748 ESPNB1AK53 854 aa13.84□□□□□ -0.19
CAPN3-203ENST00000349748 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-203ENST00000349748 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-203ENST00000349748 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
CAPN3-203ENST00000349748 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
CAPN3-203ENST00000349748 NCOA2Q15596 1464 aa13.81□□□□□ -0.2
CAPN3-203ENST00000349748 KIAA1211Q6ZU35 1233 aa13.81□□□□□ -0.2
CAPN3-203ENST00000349748 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
CAPN3-203ENST00000349748 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-203ENST00000349748 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
CAPN3-203ENST00000349748 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
CAPN3-203ENST00000349748 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
CAPN3-203ENST00000349748 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
CAPN3-203ENST00000349748 PLIN1O60240 522 aa13.79□□□□□ -0.2
CAPN3-203ENST00000349748 C8orf34Q49A92 452 aa13.79□□□□□ -0.2
CAPN3-203ENST00000349748 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
CAPN3-203ENST00000349748 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAPN3-203ENST00000349748 FAM13BQ9NYF5 915 aa13.79□□□□□ -0.2
CAPN3-203ENST00000349748 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms