RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
R3HDM2-201ENST00000347140 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
R3HDM2-201ENST00000347140 EHBP1L1Q8N3D4 1523 aa20.65■□□□□ 0.9
R3HDM2-201ENST00000347140 DDRGK1Q96HY6 314 aa20.64■□□□□ 0.9
R3HDM2-201ENST00000347140 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
R3HDM2-201ENST00000347140 SUPT6HQ7KZ85 1726 aaKnown RBP20.64■□□□□ 0.89
R3HDM2-201ENST00000347140 KDM2AQ9Y2K7 1162 aa20.63■□□□□ 0.89
R3HDM2-201ENST00000347140 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
R3HDM2-201ENST00000347140 USP47Q96K76 1375 aa20.59■□□□□ 0.89
R3HDM2-201ENST00000347140 PDE4AP27815 886 aa20.58■□□□□ 0.88
R3HDM2-201ENST00000347140 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.88
R3HDM2-201ENST00000347140 EXOC6Q8TAG9 804 aa20.58■□□□□ 0.88
R3HDM2-201ENST00000347140 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
R3HDM2-201ENST00000347140 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
R3HDM2-201ENST00000347140 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
R3HDM2-201ENST00000347140 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
R3HDM2-201ENST00000347140 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
R3HDM2-201ENST00000347140 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
R3HDM2-201ENST00000347140 PKD2Q13563 968 aa20.54■□□□□ 0.88
R3HDM2-201ENST00000347140 RALBP1Q15311 655 aa20.54■□□□□ 0.88
R3HDM2-201ENST00000347140 CUL7Q14999 1698 aa20.53■□□□□ 0.88
R3HDM2-201ENST00000347140 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
R3HDM2-201ENST00000347140 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
R3HDM2-201ENST00000347140 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
R3HDM2-201ENST00000347140 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
R3HDM2-201ENST00000347140 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
R3HDM2-201ENST00000347140 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
R3HDM2-201ENST00000347140 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
R3HDM2-201ENST00000347140 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
R3HDM2-201ENST00000347140 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
R3HDM2-201ENST00000347140 ARID4BQ4LE39 1312 aaPredicted RBP20.49■□□□□ 0.87
R3HDM2-201ENST00000347140 MS4A1P11836 297 aa20.49■□□□□ 0.87
R3HDM2-201ENST00000347140 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
R3HDM2-201ENST00000347140 IL27Q8NEV9 243 aa20.48■□□□□ 0.87
R3HDM2-201ENST00000347140 RPRD2Q5VT52 1461 aaKnown RBP20.48■□□□□ 0.87
R3HDM2-201ENST00000347140 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
R3HDM2-201ENST00000347140 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
R3HDM2-201ENST00000347140 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
R3HDM2-201ENST00000347140 UGGT2Q9NYU1 1516 aa20.47■□□□□ 0.87
R3HDM2-201ENST00000347140 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
R3HDM2-201ENST00000347140 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 ZNF644Q9H582 1327 aaPredicted RBP20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
R3HDM2-201ENST00000347140 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
R3HDM2-201ENST00000347140 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
R3HDM2-201ENST00000347140 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
R3HDM2-201ENST00000347140 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
R3HDM2-201ENST00000347140 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
R3HDM2-201ENST00000347140 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.41■□□□□ 0.86
R3HDM2-201ENST00000347140 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
R3HDM2-201ENST00000347140 BACH2Q9BYV9 841 aa20.41■□□□□ 0.86
R3HDM2-201ENST00000347140 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
R3HDM2-201ENST00000347140 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
R3HDM2-201ENST00000347140 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
R3HDM2-201ENST00000347140 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
R3HDM2-201ENST00000347140 TCOF1Q13428 1488 aaKnown RBP20.4■□□□□ 0.86
R3HDM2-201ENST00000347140 DAPK1P53355 1430 aa20.39■□□□□ 0.86
R3HDM2-201ENST00000347140 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
R3HDM2-201ENST00000347140 PLIN1O60240 522 aa20.38■□□□□ 0.85
R3HDM2-201ENST00000347140 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
R3HDM2-201ENST00000347140 EPRSP07814 1512 aaKnown RBP20.37■□□□□ 0.85
R3HDM2-201ENST00000347140 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
R3HDM2-201ENST00000347140 GSE1Q14687 1217 aa20.36■□□□□ 0.85
R3HDM2-201ENST00000347140 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
R3HDM2-201ENST00000347140 NUP155O75694 1391 aa20.35■□□□□ 0.85
R3HDM2-201ENST00000347140 CRBNQ96SW2 442 aa20.35■□□□□ 0.85
R3HDM2-201ENST00000347140 CDK13Q14004 1512 aaKnown RBP20.35■□□□□ 0.85
R3HDM2-201ENST00000347140 GCC2Q8IWJ2 1684 aa20.34■□□□□ 0.85
R3HDM2-201ENST00000347140 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
R3HDM2-201ENST00000347140 RGS3P49796 1198 aa20.33■□□□□ 0.84
R3HDM2-201ENST00000347140 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
R3HDM2-201ENST00000347140 TEX14Q8IWB6 1497 aa20.32■□□□□ 0.84
R3HDM2-201ENST00000347140 KIAA1107Q9UPP5 1409 aa20.32■□□□□ 0.84
R3HDM2-201ENST00000347140 NESP48681 1621 aa20.32■□□□□ 0.84
R3HDM2-201ENST00000347140 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
R3HDM2-201ENST00000347140 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
R3HDM2-201ENST00000347140 ABCC5O15440 1437 aa20.3■□□□□ 0.84
R3HDM2-201ENST00000347140 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
R3HDM2-201ENST00000347140 KDM6BO15054 1643 aa20.29■□□□□ 0.84
R3HDM2-201ENST00000347140 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
R3HDM2-201ENST00000347140 NFKBIBQ15653 356 aa20.28■□□□□ 0.84
R3HDM2-201ENST00000347140 FBLN2P98095 1184 aa20.27■□□□□ 0.84
R3HDM2-201ENST00000347140 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
R3HDM2-201ENST00000347140 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
R3HDM2-201ENST00000347140 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
R3HDM2-201ENST00000347140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.836e-7■■□□□ 13.2
R3HDM2-201ENST00000347140 BRPF3Q9ULD4 1205 aa20.25■□□□□ 0.83
R3HDM2-201ENST00000347140 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
R3HDM2-201ENST00000347140 CENPQQ7L2Z9 268 aaPredicted RBP20.24■□□□□ 0.83
R3HDM2-201ENST00000347140 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
R3HDM2-201ENST00000347140 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
R3HDM2-201ENST00000347140 BECN1Q14457 450 aa20.21■□□□□ 0.83
R3HDM2-201ENST00000347140 TMF1P82094 1093 aa20.21■□□□□ 0.83
R3HDM2-201ENST00000347140 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
R3HDM2-201ENST00000347140 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
R3HDM2-201ENST00000347140 UPF2Q9HAU5 1272 aaKnown RBP20.2■□□□□ 0.82
R3HDM2-201ENST00000347140 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms