RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
TRAK1-202ENST00000341421 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
TRAK1-202ENST00000341421 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
TRAK1-202ENST00000341421 NUP155O75694 1391 aa15.55■□□□□ 0.08
TRAK1-202ENST00000341421 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
TRAK1-202ENST00000341421 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
TRAK1-202ENST00000341421 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
TRAK1-202ENST00000341421 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
TRAK1-202ENST00000341421 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
TRAK1-202ENST00000341421 ROCK2O75116 1388 aaKnown RBP15.54■□□□□ 0.08
TRAK1-202ENST00000341421 MSH5O43196 834 aa15.53■□□□□ 0.08
TRAK1-202ENST00000341421 B4GALNT3Q6L9W6 998 aa15.53■□□□□ 0.08
TRAK1-202ENST00000341421 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
TRAK1-202ENST00000341421 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.07
TRAK1-202ENST00000341421 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRAK1-202ENST00000341421 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
TRAK1-202ENST00000341421 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
TRAK1-202ENST00000341421 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
TRAK1-202ENST00000341421 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
TRAK1-202ENST00000341421 RALBP1Q15311 655 aa15.48■□□□□ 0.07
TRAK1-202ENST00000341421 NAIPQ13075 1403 aa15.47■□□□□ 0.07
TRAK1-202ENST00000341421 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
TRAK1-202ENST00000341421 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
TRAK1-202ENST00000341421 TMF1P82094 1093 aa15.46■□□□□ 0.07
TRAK1-202ENST00000341421 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
TRAK1-202ENST00000341421 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
TRAK1-202ENST00000341421 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
TRAK1-202ENST00000341421 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
TRAK1-202ENST00000341421 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
TRAK1-202ENST00000341421 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
TRAK1-202ENST00000341421 ZBED9Q6R2W3 1325 aa15.44■□□□□ 0.06
TRAK1-202ENST00000341421 NEFMP07197 916 aa15.44■□□□□ 0.06
TRAK1-202ENST00000341421 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
TRAK1-202ENST00000341421 ANO8Q9HCE9 1232 aaPredicted RBP15.43■□□□□ 0.06
TRAK1-202ENST00000341421 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
TRAK1-202ENST00000341421 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
TRAK1-202ENST00000341421 IPO9Q96P70 1041 aaKnown RBP15.42■□□□□ 0.06
TRAK1-202ENST00000341421 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
TRAK1-202ENST00000341421 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
TRAK1-202ENST00000341421 USP47Q96K76 1375 aa15.41■□□□□ 0.06
TRAK1-202ENST00000341421 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
TRAK1-202ENST00000341421 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
TRAK1-202ENST00000341421 EPRSP07814 1512 aaKnown RBP15.4■□□□□ 0.06
TRAK1-202ENST00000341421 KIF15Q9NS87 1388 aa15.4■□□□□ 0.06
TRAK1-202ENST00000341421 PRDM2Q13029 1718 aa15.39■□□□□ 0.05
TRAK1-202ENST00000341421 IQGAP2Q13576 1575 aa15.39■□□□□ 0.05
TRAK1-202ENST00000341421 ROCK1Q13464 1354 aa15.39■□□□□ 0.05
TRAK1-202ENST00000341421 HNRNPMP52272 730 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAK1-202ENST00000341421 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
TRAK1-202ENST00000341421 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
TRAK1-202ENST00000341421 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
TRAK1-202ENST00000341421 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
TRAK1-202ENST00000341421 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
TRAK1-202ENST00000341421 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
TRAK1-202ENST00000341421 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
TRAK1-202ENST00000341421 KANK1Q14678 1352 aa15.37■□□□□ 0.05
TRAK1-202ENST00000341421 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
TRAK1-202ENST00000341421 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
TRAK1-202ENST00000341421 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
TRAK1-202ENST00000341421 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
TRAK1-202ENST00000341421 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 CC2D1BQ5T0F9 858 aaKnown RBP15.35■□□□□ 0.05
TRAK1-202ENST00000341421 PTPRGP23470 1445 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
TRAK1-202ENST00000341421 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 CCDC144AA2RUR9 1427 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 DAPK1P53355 1430 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 PDE3BQ13370 1112 aa15.35■□□□□ 0.05
TRAK1-202ENST00000341421 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
TRAK1-202ENST00000341421 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
TRAK1-202ENST00000341421 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
TRAK1-202ENST00000341421 CTTNBP2Q8WZ74 1663 aa15.32■□□□□ 0.04
TRAK1-202ENST00000341421 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
TRAK1-202ENST00000341421 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
TRAK1-202ENST00000341421 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
TRAK1-202ENST00000341421 KIAA1107Q9UPP5 1409 aa15.3■□□□□ 0.04
TRAK1-202ENST00000341421 CDK13Q14004 1512 aaKnown RBP15.3■□□□□ 0.04
TRAK1-202ENST00000341421 CFAP53Q96M91 514 aa15.29■□□□□ 0.04
TRAK1-202ENST00000341421 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.04
TRAK1-202ENST00000341421 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.03
TRAK1-202ENST00000341421 UGGT2Q9NYU1 1516 aa15.26■□□□□ 0.03
TRAK1-202ENST00000341421 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
TRAK1-202ENST00000341421 NBPF8Q3BBV2 869 aa15.25■□□□□ 0.03
TRAK1-202ENST00000341421 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
TRAK1-202ENST00000341421 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
TRAK1-202ENST00000341421 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
TRAK1-202ENST00000341421 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
TRAK1-202ENST00000341421 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
TRAK1-202ENST00000341421 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
TRAK1-202ENST00000341421 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
TRAK1-202ENST00000341421 ABCC5O15440 1437 aa15.23■□□□□ 0.03
TRAK1-202ENST00000341421 IL27Q8NEV9 243 aa15.23■□□□□ 0.03
TRAK1-202ENST00000341421 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
TRAK1-202ENST00000341421 STAC3Q96MF2 364 aa15.2■□□□□ 0.02
TRAK1-202ENST00000341421 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
TRAK1-202ENST00000341421 BRD4O60885 1362 aaPredicted RBP15.2■□□□□ 0.02
TRAK1-202ENST00000341421 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
TRAK1-202ENST00000341421 ARXQ96QS3 562 aa15.2■□□□□ 0.02
TRAK1-202ENST00000341421 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
TRAK1-202ENST00000341421 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms