RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
TUBB-205ENST00000327892 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
TUBB-205ENST00000327892 IPO9Q96P70 1041 aaKnown RBP13.79□□□□□ -0.2
TUBB-205ENST00000327892 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
TUBB-205ENST00000327892 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
TUBB-205ENST00000327892 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
TUBB-205ENST00000327892 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.2
TUBB-205ENST00000327892 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
TUBB-205ENST00000327892 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
TUBB-205ENST00000327892 NCOA1Q15788 1441 aa13.76□□□□□ -0.21
TUBB-205ENST00000327892 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
TUBB-205ENST00000327892 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
TUBB-205ENST00000327892 RTN4Q9NQC3 1192 aaKnown RBP13.75□□□□□ -0.21
TUBB-205ENST00000327892 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
TUBB-205ENST00000327892 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
TUBB-205ENST00000327892 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
TUBB-205ENST00000327892 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
TUBB-205ENST00000327892 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
TUBB-205ENST00000327892 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
TUBB-205ENST00000327892 CHD1O14646 1710 aa13.71□□□□□ -0.21
TUBB-205ENST00000327892 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
TUBB-205ENST00000327892 KDM6BO15054 1643 aa13.7□□□□□ -0.22
TUBB-205ENST00000327892 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
TUBB-205ENST00000327892 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
TUBB-205ENST00000327892 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
TUBB-205ENST00000327892 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
TUBB-205ENST00000327892 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
TUBB-205ENST00000327892 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
TUBB-205ENST00000327892 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
TUBB-205ENST00000327892 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
TUBB-205ENST00000327892 SPATA31E1Q6ZUB1 1445 aa13.66□□□□□ -0.22
TUBB-205ENST00000327892 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
TUBB-205ENST00000327892 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
TUBB-205ENST00000327892 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
TUBB-205ENST00000327892 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
TUBB-205ENST00000327892 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
TUBB-205ENST00000327892 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
TUBB-205ENST00000327892 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
TUBB-205ENST00000327892 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
TUBB-205ENST00000327892 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
TUBB-205ENST00000327892 NEFMP07197 916 aa13.63□□□□□ -0.23
TUBB-205ENST00000327892 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
TUBB-205ENST00000327892 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
TUBB-205ENST00000327892 PDE4AP27815 886 aa13.62□□□□□ -0.23
TUBB-205ENST00000327892 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
TUBB-205ENST00000327892 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
TUBB-205ENST00000327892 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
TUBB-205ENST00000327892 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
TUBB-205ENST00000327892 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.23
TUBB-205ENST00000327892 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.23
TUBB-205ENST00000327892 PLIN1O60240 522 aa13.57□□□□□ -0.24
TUBB-205ENST00000327892 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
TUBB-205ENST00000327892 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
TUBB-205ENST00000327892 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
TUBB-205ENST00000327892 USP47Q96K76 1375 aa13.56□□□□□ -0.24
TUBB-205ENST00000327892 TEX14Q8IWB6 1497 aa13.56□□□□□ -0.24
TUBB-205ENST00000327892 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
TUBB-205ENST00000327892 RCAN3Q9UKA8 241 aa13.56□□□□□ -0.24
TUBB-205ENST00000327892 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
TUBB-205ENST00000327892 SLC4A3P48751 1232 aa13.55□□□□□ -0.24
TUBB-205ENST00000327892 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
TUBB-205ENST00000327892 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
TUBB-205ENST00000327892 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
TUBB-205ENST00000327892 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
TUBB-205ENST00000327892 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
TUBB-205ENST00000327892 TCOF1Q13428 1488 aaKnown RBP13.53□□□□□ -0.24
TUBB-205ENST00000327892 SYNJ2O15056 1496 aa13.52□□□□□ -0.24
TUBB-205ENST00000327892 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
TUBB-205ENST00000327892 PKD2Q13563 968 aa13.51□□□□□ -0.25
TUBB-205ENST00000327892 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
TUBB-205ENST00000327892 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
TUBB-205ENST00000327892 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
TUBB-205ENST00000327892 BCORL1Q5H9F3 1711 aa13.5□□□□□ -0.25
TUBB-205ENST00000327892 SAMD9Q5K651 1589 aa13.5□□□□□ -0.25
TUBB-205ENST00000327892 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
TUBB-205ENST00000327892 CUL7Q14999 1698 aa13.49□□□□□ -0.25
TUBB-205ENST00000327892 ABCC5O15440 1437 aa13.49□□□□□ -0.25
TUBB-205ENST00000327892 ZNF777Q9ULD5 760 aaPredicted RBP13.49□□□□□ -0.25
TUBB-205ENST00000327892 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
TUBB-205ENST00000327892 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
TUBB-205ENST00000327892 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
TUBB-205ENST00000327892 DAPK1P53355 1430 aa13.48□□□□□ -0.25
TUBB-205ENST00000327892 LRPPRCP42704 1394 aaKnown RBP13.47□□□□□ -0.25
TUBB-205ENST00000327892 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
TUBB-205ENST00000327892 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.26
TUBB-205ENST00000327892 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.26
TUBB-205ENST00000327892 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.26
TUBB-205ENST00000327892 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
TUBB-205ENST00000327892 MS4A1P11836 297 aa13.45□□□□□ -0.26
TUBB-205ENST00000327892 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
TUBB-205ENST00000327892 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
TUBB-205ENST00000327892 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
TUBB-205ENST00000327892 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
TUBB-205ENST00000327892 GSE1Q14687 1217 aa13.44□□□□□ -0.26
TUBB-205ENST00000327892 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
TUBB-205ENST00000327892 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
TUBB-205ENST00000327892 RALBP1Q15311 655 aa13.43□□□□□ -0.26
TUBB-205ENST00000327892 PZPP20742 1482 aa13.42□□□□□ -0.26
TUBB-205ENST00000327892 ARID4BQ4LE39 1312 aaPredicted RBP13.42□□□□□ -0.26
TUBB-205ENST00000327892 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms