RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 NEFMP07197 916 aa19.21■□□□□ 0.67
CHRNA3-201ENST00000326828 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
CHRNA3-201ENST00000326828 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
CHRNA3-201ENST00000326828 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.2■□□□□ 0.66
CHRNA3-201ENST00000326828 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
CHRNA3-201ENST00000326828 KDM6BO15054 1643 aa19.2■□□□□ 0.66
CHRNA3-201ENST00000326828 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
CHRNA3-201ENST00000326828 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
CHRNA3-201ENST00000326828 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
CHRNA3-201ENST00000326828 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
CHRNA3-201ENST00000326828 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
CHRNA3-201ENST00000326828 SMG6Q86US8 1419 aaKnown RBP19.15■□□□□ 0.66
CHRNA3-201ENST00000326828 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
CHRNA3-201ENST00000326828 PLIN1O60240 522 aa19.12■□□□□ 0.65
CHRNA3-201ENST00000326828 NESP48681 1621 aa19.11■□□□□ 0.65
CHRNA3-201ENST00000326828 PNISRQ8TF01 805 aaKnown RBP19.1■□□□□ 0.65
CHRNA3-201ENST00000326828 PDE4AP27815 886 aa19.1■□□□□ 0.65
CHRNA3-201ENST00000326828 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
CHRNA3-201ENST00000326828 MAGI3Q5TCQ9 1506 aa19.08■□□□□ 0.65
CHRNA3-201ENST00000326828 USP47Q96K76 1375 aa19.08■□□□□ 0.65
CHRNA3-201ENST00000326828 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.65
CHRNA3-201ENST00000326828 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
CHRNA3-201ENST00000326828 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
CHRNA3-201ENST00000326828 CARD11Q9BXL7 1154 aa19.06■□□□□ 0.64
CHRNA3-201ENST00000326828 RCAN3Q9UKA8 241 aa19.06■□□□□ 0.64
CHRNA3-201ENST00000326828 DHX29Q7Z478 1369 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-201ENST00000326828 CDCA7LQ96GN5 454 aa19.05■□□□□ 0.64
CHRNA3-201ENST00000326828 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
CHRNA3-201ENST00000326828 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
CHRNA3-201ENST00000326828 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
CHRNA3-201ENST00000326828 PKD2Q13563 968 aa19.04■□□□□ 0.64
CHRNA3-201ENST00000326828 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
CHRNA3-201ENST00000326828 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
CHRNA3-201ENST00000326828 EHBP1L1Q8N3D4 1523 aa19.02■□□□□ 0.64
CHRNA3-201ENST00000326828 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.63
CHRNA3-201ENST00000326828 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
CHRNA3-201ENST00000326828 SPATA31E1Q6ZUB1 1445 aa19.01■□□□□ 0.63
CHRNA3-201ENST00000326828 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
CHRNA3-201ENST00000326828 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
CHRNA3-201ENST00000326828 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
CHRNA3-201ENST00000326828 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
CHRNA3-201ENST00000326828 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
CHRNA3-201ENST00000326828 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
CHRNA3-201ENST00000326828 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
CHRNA3-201ENST00000326828 BACH2Q9BYV9 841 aa18.97■□□□□ 0.63
CHRNA3-201ENST00000326828 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
CHRNA3-201ENST00000326828 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
CHRNA3-201ENST00000326828 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
CHRNA3-201ENST00000326828 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
CHRNA3-201ENST00000326828 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
CHRNA3-201ENST00000326828 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
CHRNA3-201ENST00000326828 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
CHRNA3-201ENST00000326828 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
CHRNA3-201ENST00000326828 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
CHRNA3-201ENST00000326828 DAPK1P53355 1430 aa18.91■□□□□ 0.62
CHRNA3-201ENST00000326828 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
CHRNA3-201ENST00000326828 EPRSP07814 1512 aaKnown RBP18.91■□□□□ 0.62
CHRNA3-201ENST00000326828 CUL7Q14999 1698 aa18.91■□□□□ 0.62
CHRNA3-201ENST00000326828 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
CHRNA3-201ENST00000326828 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-201ENST00000326828 ABCC5O15440 1437 aa18.9■□□□□ 0.62
CHRNA3-201ENST00000326828 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
CHRNA3-201ENST00000326828 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
CHRNA3-201ENST00000326828 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
CHRNA3-201ENST00000326828 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
CHRNA3-201ENST00000326828 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
CHRNA3-201ENST00000326828 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
CHRNA3-201ENST00000326828 BCORL1Q5H9F3 1711 aa18.88■□□□□ 0.61
CHRNA3-201ENST00000326828 SAMD9Q5K651 1589 aa18.86■□□□□ 0.61
CHRNA3-201ENST00000326828 RGS3P49796 1198 aa18.86■□□□□ 0.61
CHRNA3-201ENST00000326828 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
CHRNA3-201ENST00000326828 NFKBIBQ15653 356 aa18.85■□□□□ 0.61
CHRNA3-201ENST00000326828 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
CHRNA3-201ENST00000326828 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.6
CHRNA3-201ENST00000326828 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 GSE1Q14687 1217 aa18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 NLRP13Q86W25 1043 aa18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 USP35Q9P2H5 1018 aa18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 NUP155O75694 1391 aa18.82■□□□□ 0.6
CHRNA3-201ENST00000326828 ARXQ96QS3 562 aa18.8■□□□□ 0.6
CHRNA3-201ENST00000326828 BRD4O60885 1362 aaPredicted RBP18.8■□□□□ 0.6
CHRNA3-201ENST00000326828 MS4A1P11836 297 aa18.79■□□□□ 0.6
CHRNA3-201ENST00000326828 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
CHRNA3-201ENST00000326828 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-201ENST00000326828 DDRGK1Q96HY6 314 aa18.79■□□□□ 0.6
CHRNA3-201ENST00000326828 PZPP20742 1482 aa18.79■□□□□ 0.6
CHRNA3-201ENST00000326828 LRPPRCP42704 1394 aaKnown RBP18.78■□□□□ 0.6
CHRNA3-201ENST00000326828 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
CHRNA3-201ENST00000326828 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
CHRNA3-201ENST00000326828 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
CHRNA3-201ENST00000326828 ROCK1Q13464 1354 aa18.77■□□□□ 0.6
CHRNA3-201ENST00000326828 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
CHRNA3-201ENST00000326828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHRNA3-201ENST00000326828 PRG4Q92954 1404 aaPredicted RBP18.75■□□□□ 0.59
CHRNA3-201ENST00000326828 FBLN2P98095 1184 aa18.75■□□□□ 0.59
CHRNA3-201ENST00000326828 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
CHRNA3-201ENST00000326828 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
CHRNA3-201ENST00000326828 PANK3Q9H999 370 aa18.73■□□□□ 0.59
CHRNA3-201ENST00000326828 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms