RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 PCF11O94913 1555 aaKnown RBP8.74□□□□□ -1.01
SPATA9-202ENST00000316087 ABCA10Q8WWZ4 1543 aa8.74□□□□□ -1.01
SPATA9-202ENST00000316087 ANP32CO43423 234 aa8.73□□□□□ -1.01
SPATA9-202ENST00000316087 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
SPATA9-202ENST00000316087 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
SPATA9-202ENST00000316087 PHLDB1Q86UU1 1377 aa8.72□□□□□ -1.01
SPATA9-202ENST00000316087 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
SPATA9-202ENST00000316087 WDR97A6NE52 1622 aa8.71□□□□□ -1.02
SPATA9-202ENST00000316087 UACAQ9BZF9 1416 aa8.71□□□□□ -1.02
SPATA9-202ENST00000316087 ERICH6BQ5W0A0 696 aa8.7□□□□□ -1.02
SPATA9-202ENST00000316087 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
SPATA9-202ENST00000316087 TONSLQ96HA7 1378 aa8.7□□□□□ -1.02
SPATA9-202ENST00000316087 HFM1A2PYH4 1435 aa8.7□□□□□ -1.02
SPATA9-202ENST00000316087 PPP1R15AO75807 674 aaPredicted RBP8.69□□□□□ -1.02
SPATA9-202ENST00000316087 FGD6Q6ZV73 1430 aa8.69□□□□□ -1.02
SPATA9-202ENST00000316087 ITGAEP38570 1179 aa8.69□□□□□ -1.02
SPATA9-202ENST00000316087 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
SPATA9-202ENST00000316087 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
SPATA9-202ENST00000316087 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
SPATA9-202ENST00000316087 FANCD2Q9BXW9 1451 aa8.68□□□□□ -1.02
SPATA9-202ENST00000316087 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
SPATA9-202ENST00000316087 AKNAQ7Z591 1439 aa8.68□□□□□ -1.02
SPATA9-202ENST00000316087 CCDC18Q5T9S5 1454 aa8.68□□□□□ -1.02
SPATA9-202ENST00000316087 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
SPATA9-202ENST00000316087 SAMD9Q5K651 1589 aa8.67□□□□□ -1.02
SPATA9-202ENST00000316087 PTPN23Q9H3S7 1636 aa8.66□□□□□ -1.02
SPATA9-202ENST00000316087 MTUS2Q5JR59 1369 aa8.65□□□□□ -1.02
SPATA9-202ENST00000316087 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.02
SPATA9-202ENST00000316087 MYOM3Q5VTT5 1437 aa8.65□□□□□ -1.02
SPATA9-202ENST00000316087 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.03
SPATA9-202ENST00000316087 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
SPATA9-202ENST00000316087 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
SPATA9-202ENST00000316087 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
SPATA9-202ENST00000316087 GCC2Q8IWJ2 1684 aa8.63□□□□□ -1.03
SPATA9-202ENST00000316087 HECW1Q76N89 1606 aa8.63□□□□□ -1.03
SPATA9-202ENST00000316087 MYT1LQ9UL68 1186 aa8.63□□□□□ -1.03
SPATA9-202ENST00000316087 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
SPATA9-202ENST00000316087 TCOF1Q13428 1488 aaKnown RBP8.61□□□□□ -1.03
SPATA9-202ENST00000316087 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 ABCA5Q8WWZ7 1642 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 MIA2Q96PC5 1412 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 GRIN2BQ13224 1484 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
SPATA9-202ENST00000316087 NCOA2Q15596 1464 aa8.6□□□□□ -1.03
SPATA9-202ENST00000316087 NAIPQ13075 1403 aa8.6□□□□□ -1.03
SPATA9-202ENST00000316087 SIN3AQ96ST3 1273 aa8.6□□□□□ -1.03
SPATA9-202ENST00000316087 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
SPATA9-202ENST00000316087 UGGT2Q9NYU1 1516 aa8.6□□□□□ -1.03
SPATA9-202ENST00000316087 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
SPATA9-202ENST00000316087 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
SPATA9-202ENST00000316087 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
SPATA9-202ENST00000316087 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
SPATA9-202ENST00000316087 POLR1AO95602 1720 aaPredicted RBP8.56□□□□□ -1.04
SPATA9-202ENST00000316087 PDS5BQ9NTI5 1447 aa8.56□□□□□ -1.04
SPATA9-202ENST00000316087 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
SPATA9-202ENST00000316087 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
SPATA9-202ENST00000316087 EVX2Q03828 476 aa8.56□□□□□ -1.04
SPATA9-202ENST00000316087 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
SPATA9-202ENST00000316087 ROCK1Q13464 1354 aa8.55□□□□□ -1.04
SPATA9-202ENST00000316087 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
SPATA9-202ENST00000316087 CNTLNQ9NXG0 1405 aa8.54□□□□□ -1.04
SPATA9-202ENST00000316087 PRKAR2AP13861 404 aaKnown RBP8.53□□□□□ -1.04
SPATA9-202ENST00000316087 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
SPATA9-202ENST00000316087 LRRIQ1Q96JM4 1722 aa8.53□□□□□ -1.04
SPATA9-202ENST00000316087 CLEC11AQ9Y240 323 aa8.53□□□□□ -1.04
SPATA9-202ENST00000316087 P3H3Q8IVL6 736 aa8.52□□□□□ -1.04
SPATA9-202ENST00000316087 KCNH8Q96L42 1107 aa8.52□□□□□ -1.04
SPATA9-202ENST00000316087 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
SPATA9-202ENST00000316087 SPDYE4A6NLX3 237 aa8.52□□□□□ -1.05
SPATA9-202ENST00000316087 KDM5BQ9UGL1 1544 aa8.51□□□□□ -1.05
SPATA9-202ENST00000316087 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
SPATA9-202ENST00000316087 NESP48681 1621 aa8.51□□□□□ -1.05
SPATA9-202ENST00000316087 TRIM52Q96A61 297 aa8.51□□□□□ -1.05
SPATA9-202ENST00000316087 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
SPATA9-202ENST00000316087 PTPRKQ15262 1439 aa8.5□□□□□ -1.05
SPATA9-202ENST00000316087 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
SPATA9-202ENST00000316087 HNRNPUQ00839 825 aaKnown RBP eCLIP8.5□□□□□ -1.05
SPATA9-202ENST00000316087 NCOA1Q15788 1441 aa8.5□□□□□ -1.05
SPATA9-202ENST00000316087 EPRSP07814 1512 aaKnown RBP8.49□□□□□ -1.05
SPATA9-202ENST00000316087 ZBED9Q6R2W3 1325 aa8.49□□□□□ -1.05
SPATA9-202ENST00000316087 RPRD2Q5VT52 1461 aaKnown RBP8.49□□□□□ -1.05
SPATA9-202ENST00000316087 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
SPATA9-202ENST00000316087 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
SPATA9-202ENST00000316087 RGL2O15211 777 aa8.48□□□□□ -1.05
SPATA9-202ENST00000316087 PROM2Q8N271 834 aa8.48□□□□□ -1.05
SPATA9-202ENST00000316087 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
SPATA9-202ENST00000316087 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
SPATA9-202ENST00000316087 ITSN2Q9NZM3 1697 aa8.47□□□□□ -1.05
SPATA9-202ENST00000316087 HSPA5P11021 654 aaKnown RBP8.47□□□□□ -1.05
SPATA9-202ENST00000316087 WASHC2AQ641Q2 1341 aa8.47□□□□□ -1.05
SPATA9-202ENST00000316087 ROCK2O75116 1388 aaKnown RBP8.47□□□□□ -1.05
SPATA9-202ENST00000316087 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
SPATA9-202ENST00000316087 WDR62O43379 1518 aa8.47□□□□□ -1.05
SPATA9-202ENST00000316087 CCDC7Q96M83 1385 aa8.46□□□□□ -1.06
SPATA9-202ENST00000316087 MPHOSPH9Q99550 1183 aa8.46□□□□□ -1.06
SPATA9-202ENST00000316087 ADGBQ8N7X0 1667 aa8.45□□□□□ -1.06
SPATA9-202ENST00000316087 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
SPATA9-202ENST00000316087 PRKRIP1Q9H875 184 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms