RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
SPATA9-202ENST00000316087 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
SPATA9-202ENST00000316087 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
SPATA9-202ENST00000316087 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.23
SPATA9-202ENST00000316087 FOXD1Q16676 465 aa12.88□□□□□ -0.35
SPATA9-202ENST00000316087 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
SPATA9-202ENST00000316087 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
SPATA9-202ENST00000316087 MSH5O43196 834 aa12.19□□□□□ -0.46
SPATA9-202ENST00000316087 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
SPATA9-202ENST00000316087 PLPPR3Q6T4P5 718 aa11.95□□□□□ -0.5
SPATA9-202ENST00000316087 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
SPATA9-202ENST00000316087 ADRA2BP18089 450 aa11.8□□□□□ -0.52
SPATA9-202ENST00000316087 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
SPATA9-202ENST00000316087 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
SPATA9-202ENST00000316087 MAPK8IP2Q13387 824 aaPredicted RBP10.9□□□□□ -0.66
SPATA9-202ENST00000316087 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.67
SPATA9-202ENST00000316087 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
SPATA9-202ENST00000316087 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
SPATA9-202ENST00000316087 KCNA4P22459 653 aa10.67□□□□□ -0.7
SPATA9-202ENST00000316087 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
SPATA9-202ENST00000316087 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
SPATA9-202ENST00000316087 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
SPATA9-202ENST00000316087 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.72
SPATA9-202ENST00000316087 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
SPATA9-202ENST00000316087 PPP4R3CPQ6ZMV5 832 aa10.43□□□□□ -0.74
SPATA9-202ENST00000316087 HOXD11P31277 338 aaPredicted RBP10.39□□□□□ -0.75
SPATA9-202ENST00000316087 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
SPATA9-202ENST00000316087 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
SPATA9-202ENST00000316087 SHROOM4Q9ULL8 1493 aa10.37□□□□□ -0.75
SPATA9-202ENST00000316087 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
SPATA9-202ENST00000316087 SUPT5HO00267 1087 aaKnown RBP10.31□□□□□ -0.76
SPATA9-202ENST00000316087 SLC4A1APQ9BWU0 796 aaKnown RBP10.31□□□□□ -0.76
SPATA9-202ENST00000316087 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
SPATA9-202ENST00000316087 RNF216Q9NWF9 866 aaPredicted RBP10.26□□□□□ -0.77
SPATA9-202ENST00000316087 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.78
SPATA9-202ENST00000316087 HRCP23327 699 aa10.16□□□□□ -0.78
SPATA9-202ENST00000316087 DNAJC5BQ9UF47 199 aa10.09□□□□□ -0.79
SPATA9-202ENST00000316087 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
SPATA9-202ENST00000316087 MYO15BQ96JP2 1530 aa10.08□□□□□ -0.8
SPATA9-202ENST00000316087 ABCC9O60706 1549 aa10□□□□□ -0.81
SPATA9-202ENST00000316087 DCAF8L2P0C7V8 631 aa10□□□□□ -0.81
SPATA9-202ENST00000316087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.82
SPATA9-202ENST00000316087 ZEB1P37275 1124 aaPredicted RBP9.94□□□□□ -0.82
SPATA9-202ENST00000316087 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
SPATA9-202ENST00000316087 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
SPATA9-202ENST00000316087 ZBTB22O15209 634 aa9.86□□□□□ -0.83
SPATA9-202ENST00000316087 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
SPATA9-202ENST00000316087 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
SPATA9-202ENST00000316087 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
SPATA9-202ENST00000316087 NACADO15069 1562 aa9.81□□□□□ -0.84
SPATA9-202ENST00000316087 NPM3O75607 178 aaKnown RBP9.8□□□□□ -0.84
SPATA9-202ENST00000316087 DAXXQ9UER7 740 aaPredicted RBP9.77□□□□□ -0.85
SPATA9-202ENST00000316087 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
SPATA9-202ENST00000316087 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
SPATA9-202ENST00000316087 TRIM41Q8WV44 630 aa9.75□□□□□ -0.85
SPATA9-202ENST00000316087 LOC105371045A0A1W2PR82 267 aa9.72□□□□□ -0.85
SPATA9-202ENST00000316087 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
SPATA9-202ENST00000316087 CAPN15O75808 1086 aa9.65□□□□□ -0.86
SPATA9-202ENST00000316087 PPARGC1BQ86YN6 1023 aaKnown RBP9.64□□□□□ -0.87
SPATA9-202ENST00000316087 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
SPATA9-202ENST00000316087 POTEHQ6S545 545 aa9.63□□□□□ -0.87
SPATA9-202ENST00000316087 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
SPATA9-202ENST00000316087 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
SPATA9-202ENST00000316087 DSG3P32926 999 aa9.6□□□□□ -0.87
SPATA9-202ENST00000316087 BCANQ96GW7 911 aa9.59□□□□□ -0.87
SPATA9-202ENST00000316087 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
SPATA9-202ENST00000316087 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
SPATA9-202ENST00000316087 EEA1Q15075 1411 aa9.55□□□□□ -0.88
SPATA9-202ENST00000316087 EIF4G1Q04637 1599 aaKnown RBP9.53□□□□□ -0.88
SPATA9-202ENST00000316087 FKBP8Q14318 412 aa9.53□□□□□ -0.88
SPATA9-202ENST00000316087 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SPATA9-202ENST00000316087 TOP2AP11388 1531 aaKnown RBP9.52□□□□□ -0.89
SPATA9-202ENST00000316087 WIZO95785 1651 aa9.51□□□□□ -0.89
SPATA9-202ENST00000316087 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
SPATA9-202ENST00000316087 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
SPATA9-202ENST00000316087 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
SPATA9-202ENST00000316087 ARXQ96QS3 562 aa9.47□□□□□ -0.89
SPATA9-202ENST00000316087 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.89
SPATA9-202ENST00000316087 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
SPATA9-202ENST00000316087 APLP2Q06481 763 aa9.45□□□□□ -0.9
SPATA9-202ENST00000316087 FAM9AQ8IZU1 332 aaPredicted RBP9.45□□□□□ -0.9
SPATA9-202ENST00000316087 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
SPATA9-202ENST00000316087 MYT1Q01538 1121 aa9.43□□□□□ -0.9
SPATA9-202ENST00000316087 CENPBP07199 599 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-202ENST00000316087 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-202ENST00000316087 TNIKQ9UKE5 1360 aa9.42□□□□□ -0.9
SPATA9-202ENST00000316087 CCER1Q8TC90 406 aaPredicted RBP9.41□□□□□ -0.9
SPATA9-202ENST00000316087 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
SPATA9-202ENST00000316087 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
SPATA9-202ENST00000316087 SMARCA2P51531 1590 aa9.4□□□□□ -0.91
SPATA9-202ENST00000316087 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
SPATA9-202ENST00000316087 ABCB7O75027 752 aa9.38□□□□□ -0.91
SPATA9-202ENST00000316087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
SPATA9-202ENST00000316087 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
SPATA9-202ENST00000316087 CEP162Q5TB80 1403 aa9.37□□□□□ -0.91
SPATA9-202ENST00000316087 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
SPATA9-202ENST00000316087 PEG3Q9GZU2 1588 aa9.36□□□□□ -0.91
SPATA9-202ENST00000316087 GOLGA3Q08378 1498 aa9.36□□□□□ -0.91
SPATA9-202ENST00000316087 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
SPATA9-202ENST00000316087 KIF21BO75037 1637 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms