RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
NPAS4-201ENST00000311034 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
NPAS4-201ENST00000311034 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
NPAS4-201ENST00000311034 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
NPAS4-201ENST00000311034 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
NPAS4-201ENST00000311034 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
NPAS4-201ENST00000311034 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
NPAS4-201ENST00000311034 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
NPAS4-201ENST00000311034 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
NPAS4-201ENST00000311034 LAS1LQ9Y4W2 734 aaKnown RBP18.23■□□□□ 0.51
NPAS4-201ENST00000311034 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.5
NPAS4-201ENST00000311034 NCOA1Q15788 1441 aa18.2■□□□□ 0.5
NPAS4-201ENST00000311034 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
NPAS4-201ENST00000311034 KDM6BO15054 1643 aa18.18■□□□□ 0.5
NPAS4-201ENST00000311034 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
NPAS4-201ENST00000311034 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
NPAS4-201ENST00000311034 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
NPAS4-201ENST00000311034 CTTNBP2Q8WZ74 1663 aa18.16■□□□□ 0.5
NPAS4-201ENST00000311034 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
NPAS4-201ENST00000311034 CC2D1BQ5T0F9 858 aaKnown RBP18.15■□□□□ 0.5
NPAS4-201ENST00000311034 CUL7Q14999 1698 aa18.14■□□□□ 0.5
NPAS4-201ENST00000311034 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.49
NPAS4-201ENST00000311034 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
NPAS4-201ENST00000311034 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
NPAS4-201ENST00000311034 MAGI3Q5TCQ9 1506 aa18.13■□□□□ 0.49
NPAS4-201ENST00000311034 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
NPAS4-201ENST00000311034 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
NPAS4-201ENST00000311034 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
NPAS4-201ENST00000311034 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
NPAS4-201ENST00000311034 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
NPAS4-201ENST00000311034 USP47Q96K76 1375 aa18.11■□□□□ 0.49
NPAS4-201ENST00000311034 PKD2Q13563 968 aa18.1■□□□□ 0.49
NPAS4-201ENST00000311034 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
NPAS4-201ENST00000311034 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
NPAS4-201ENST00000311034 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
NPAS4-201ENST00000311034 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
NPAS4-201ENST00000311034 PLIN1O60240 522 aa18.08■□□□□ 0.49
NPAS4-201ENST00000311034 NEFMP07197 916 aa18.08■□□□□ 0.49
NPAS4-201ENST00000311034 ARXQ96QS3 562 aa18.08■□□□□ 0.48
NPAS4-201ENST00000311034 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
NPAS4-201ENST00000311034 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
NPAS4-201ENST00000311034 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
NPAS4-201ENST00000311034 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
NPAS4-201ENST00000311034 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
NPAS4-201ENST00000311034 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
NPAS4-201ENST00000311034 HECW1Q76N89 1606 aa18.03■□□□□ 0.48
NPAS4-201ENST00000311034 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
NPAS4-201ENST00000311034 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
NPAS4-201ENST00000311034 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
NPAS4-201ENST00000311034 RRP1P56182 461 aaKnown RBP18.02■□□□□ 0.48
NPAS4-201ENST00000311034 DAXXQ9UER7 740 aaPredicted RBP18.02■□□□□ 0.48
NPAS4-201ENST00000311034 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
NPAS4-201ENST00000311034 PDE4AP27815 886 aa18■□□□□ 0.47
NPAS4-201ENST00000311034 DAPK1P53355 1430 aa18■□□□□ 0.47
NPAS4-201ENST00000311034 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
NPAS4-201ENST00000311034 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
NPAS4-201ENST00000311034 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
NPAS4-201ENST00000311034 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
NPAS4-201ENST00000311034 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
NPAS4-201ENST00000311034 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
NPAS4-201ENST00000311034 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
NPAS4-201ENST00000311034 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
NPAS4-201ENST00000311034 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
NPAS4-201ENST00000311034 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
NPAS4-201ENST00000311034 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
NPAS4-201ENST00000311034 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
NPAS4-201ENST00000311034 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
NPAS4-201ENST00000311034 ABCC5O15440 1437 aa17.96■□□□□ 0.47
NPAS4-201ENST00000311034 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
NPAS4-201ENST00000311034 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
NPAS4-201ENST00000311034 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
NPAS4-201ENST00000311034 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
NPAS4-201ENST00000311034 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
NPAS4-201ENST00000311034 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
NPAS4-201ENST00000311034 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
NPAS4-201ENST00000311034 RGS3P49796 1198 aa17.93■□□□□ 0.46
NPAS4-201ENST00000311034 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
NPAS4-201ENST00000311034 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
NPAS4-201ENST00000311034 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
NPAS4-201ENST00000311034 NUP155O75694 1391 aa17.91■□□□□ 0.46
NPAS4-201ENST00000311034 CRBNQ96SW2 442 aa17.89■□□□□ 0.45
NPAS4-201ENST00000311034 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
NPAS4-201ENST00000311034 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
NPAS4-201ENST00000311034 BACH2Q9BYV9 841 aa17.87■□□□□ 0.45
NPAS4-201ENST00000311034 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
NPAS4-201ENST00000311034 RALBP1Q15311 655 aa17.87■□□□□ 0.45
NPAS4-201ENST00000311034 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
NPAS4-201ENST00000311034 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
NPAS4-201ENST00000311034 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
NPAS4-201ENST00000311034 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
NPAS4-201ENST00000311034 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
NPAS4-201ENST00000311034 PZPP20742 1482 aa17.83■□□□□ 0.45
NPAS4-201ENST00000311034 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.45
NPAS4-201ENST00000311034 PRKCSHP14314 528 aaPredicted RBP17.83■□□□□ 0.44
NPAS4-201ENST00000311034 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.44
NPAS4-201ENST00000311034 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
NPAS4-201ENST00000311034 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
NPAS4-201ENST00000311034 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
NPAS4-201ENST00000311034 WDR62O43379 1518 aa17.82■□□□□ 0.44
NPAS4-201ENST00000311034 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms