RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
XCR1-201ENST00000309285 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
XCR1-201ENST00000309285 PKD2Q13563 968 aa12.41□□□□□ -0.42
XCR1-201ENST00000309285 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
XCR1-201ENST00000309285 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
XCR1-201ENST00000309285 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
XCR1-201ENST00000309285 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
XCR1-201ENST00000309285 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
XCR1-201ENST00000309285 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
XCR1-201ENST00000309285 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
XCR1-201ENST00000309285 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
XCR1-201ENST00000309285 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
XCR1-201ENST00000309285 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
XCR1-201ENST00000309285 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
XCR1-201ENST00000309285 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
XCR1-201ENST00000309285 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
XCR1-201ENST00000309285 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
XCR1-201ENST00000309285 NUP155O75694 1391 aa12.35□□□□□ -0.43
XCR1-201ENST00000309285 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
XCR1-201ENST00000309285 PTPRGP23470 1445 aa12.35□□□□□ -0.43
XCR1-201ENST00000309285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
XCR1-201ENST00000309285 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
XCR1-201ENST00000309285 HFM1A2PYH4 1435 aa12.34□□□□□ -0.43
XCR1-201ENST00000309285 CDK13Q14004 1512 aaKnown RBP12.34□□□□□ -0.43
XCR1-201ENST00000309285 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
XCR1-201ENST00000309285 EPRSP07814 1512 aaKnown RBP12.34□□□□□ -0.43
XCR1-201ENST00000309285 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
XCR1-201ENST00000309285 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
XCR1-201ENST00000309285 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
XCR1-201ENST00000309285 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
XCR1-201ENST00000309285 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
XCR1-201ENST00000309285 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
XCR1-201ENST00000309285 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
XCR1-201ENST00000309285 NAIPQ13075 1403 aa12.31□□□□□ -0.44
XCR1-201ENST00000309285 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
XCR1-201ENST00000309285 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
XCR1-201ENST00000309285 A0A0G2JS52 829 aa12.31□□□□□ -0.44
XCR1-201ENST00000309285 SENP3-EIF4A1A0A087X0R7 540 aa12.29□□□□□ -0.44
XCR1-201ENST00000309285 SUPT6HQ7KZ85 1726 aaKnown RBP12.29□□□□□ -0.44
XCR1-201ENST00000309285 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
XCR1-201ENST00000309285 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
XCR1-201ENST00000309285 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
XCR1-201ENST00000309285 GRIN2AQ12879 1464 aa12.27□□□□□ -0.44
XCR1-201ENST00000309285 WDR97A6NE52 1622 aa12.27□□□□□ -0.44
XCR1-201ENST00000309285 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
XCR1-201ENST00000309285 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
XCR1-201ENST00000309285 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
XCR1-201ENST00000309285 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
XCR1-201ENST00000309285 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
XCR1-201ENST00000309285 HSP90AA1P07900 732 aaKnown RBP12.24□□□□□ -0.45
XCR1-201ENST00000309285 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
XCR1-201ENST00000309285 CDK11BP21127 795 aaKnown RBP12.23□□□□□ -0.45
XCR1-201ENST00000309285 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
XCR1-201ENST00000309285 SYNJ2O15056 1496 aa12.23□□□□□ -0.45
XCR1-201ENST00000309285 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
XCR1-201ENST00000309285 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
XCR1-201ENST00000309285 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
XCR1-201ENST00000309285 DAPK1P53355 1430 aa12.21□□□□□ -0.45
XCR1-201ENST00000309285 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.46
XCR1-201ENST00000309285 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.46
XCR1-201ENST00000309285 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
XCR1-201ENST00000309285 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
XCR1-201ENST00000309285 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
XCR1-201ENST00000309285 THOC2Q8NI27 1593 aaKnown RBP12.19□□□□□ -0.46
XCR1-201ENST00000309285 KIF15Q9NS87 1388 aa12.19□□□□□ -0.46
XCR1-201ENST00000309285 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
XCR1-201ENST00000309285 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
XCR1-201ENST00000309285 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
XCR1-201ENST00000309285 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
XCR1-201ENST00000309285 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
XCR1-201ENST00000309285 ABCC5O15440 1437 aa12.17□□□□□ -0.46
XCR1-201ENST00000309285 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
XCR1-201ENST00000309285 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
XCR1-201ENST00000309285 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
XCR1-201ENST00000309285 UPF2Q9HAU5 1272 aaKnown RBP12.16□□□□□ -0.46
XCR1-201ENST00000309285 SPAG9O60271 1321 aaKnown RBP12.16□□□□□ -0.46
XCR1-201ENST00000309285 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
XCR1-201ENST00000309285 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
XCR1-201ENST00000309285 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
XCR1-201ENST00000309285 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
XCR1-201ENST00000309285 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.47
XCR1-201ENST00000309285 ROCK1Q13464 1354 aa12.15□□□□□ -0.47
XCR1-201ENST00000309285 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.47
XCR1-201ENST00000309285 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
XCR1-201ENST00000309285 USP47Q96K76 1375 aa12.14□□□□□ -0.47
XCR1-201ENST00000309285 KIF3BO15066 747 aa12.14□□□□□ -0.47
XCR1-201ENST00000309285 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
XCR1-201ENST00000309285 B4GALNT3Q6L9W6 998 aa12.13□□□□□ -0.47
XCR1-201ENST00000309285 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
XCR1-201ENST00000309285 CCDC144AA2RUR9 1427 aa12.12□□□□□ -0.47
XCR1-201ENST00000309285 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
XCR1-201ENST00000309285 KIF7Q2M1P5 1343 aa12.12□□□□□ -0.47
XCR1-201ENST00000309285 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
XCR1-201ENST00000309285 WDR43Q15061 677 aaKnown RBP eCLIP12.12□□□□□ -0.47
XCR1-201ENST00000309285 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
XCR1-201ENST00000309285 PPP4R2Q9NY27 417 aa12.11□□□□□ -0.47
XCR1-201ENST00000309285 CAMSAP2Q08AD1 1489 aa12.11□□□□□ -0.47
XCR1-201ENST00000309285 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
XCR1-201ENST00000309285 GGT6Q6P531 493 aa12.11□□□□□ -0.47
XCR1-201ENST00000309285 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms