RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.513e-8■□□□□ 9.4
CNNM3-201ENST00000305510 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.5
CNNM3-201ENST00000305510 ZBTB47Q9UFB7 747 aaPredicted RBP24.45■■□□□ 1.5
CNNM3-201ENST00000305510 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
CNNM3-201ENST00000305510 CDK13Q14004 1512 aaKnown RBP24.43■■□□□ 1.5
CNNM3-201ENST00000305510 PKD2Q13563 968 aa24.42■■□□□ 1.5
CNNM3-201ENST00000305510 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
CNNM3-201ENST00000305510 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
CNNM3-201ENST00000305510 IPO9Q96P70 1041 aaKnown RBP24.35■■□□□ 1.49
CNNM3-201ENST00000305510 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
CNNM3-201ENST00000305510 TMC1Q8TDI8 760 aa24.33■■□□□ 1.49
CNNM3-201ENST00000305510 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
CNNM3-201ENST00000305510 CARD11Q9BXL7 1154 aa24.31■■□□□ 1.48
CNNM3-201ENST00000305510 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 TSPY4P0CV99 314 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 TSPY10P0CW01 314 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 DCAF11Q8TEB1 546 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
CNNM3-201ENST00000305510 PTPN23Q9H3S7 1636 aa24.29■■□□□ 1.48
CNNM3-201ENST00000305510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.28■■□□□ 1.485e-7■□□□□ 9.7
CNNM3-201ENST00000305510 HNRNPMP52272 730 aaKnown RBP eCLIP24.28■■□□□ 1.481e-8■■■□□ 17.5
CNNM3-201ENST00000305510 CFAP43Q8NDM7 1665 aa24.27■■□□□ 1.48
CNNM3-201ENST00000305510 NEFMP07197 916 aa24.26■■□□□ 1.47
CNNM3-201ENST00000305510 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
CNNM3-201ENST00000305510 CCDC7Q96M83 1385 aa24.23■■□□□ 1.47
CNNM3-201ENST00000305510 EPRSP07814 1512 aaKnown RBP24.23■■□□□ 1.47
CNNM3-201ENST00000305510 MAGI3Q5TCQ9 1506 aa24.23■■□□□ 1.47
CNNM3-201ENST00000305510 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
CNNM3-201ENST00000305510 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
CNNM3-201ENST00000305510 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
CNNM3-201ENST00000305510 CUL7Q14999 1698 aa24.2■■□□□ 1.46
CNNM3-201ENST00000305510 BRPF3Q9ULD4 1205 aa24.2■■□□□ 1.46
CNNM3-201ENST00000305510 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
CNNM3-201ENST00000305510 NUP155O75694 1391 aa24.19■■□□□ 1.46
CNNM3-201ENST00000305510 SUPT6HQ7KZ85 1726 aaKnown RBP24.17■■□□□ 1.46
CNNM3-201ENST00000305510 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
CNNM3-201ENST00000305510 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
CNNM3-201ENST00000305510 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
CNNM3-201ENST00000305510 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.45
CNNM3-201ENST00000305510 ERCC6Q03468 1493 aa24.14■■□□□ 1.45
CNNM3-201ENST00000305510 KDM6BO15054 1643 aa24.13■■□□□ 1.45
CNNM3-201ENST00000305510 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
CNNM3-201ENST00000305510 CC2D1BQ5T0F9 858 aaKnown RBP24.11■■□□□ 1.45
CNNM3-201ENST00000305510 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
CNNM3-201ENST00000305510 PKNOX2Q96KN3 472 aa24.09■■□□□ 1.45
CNNM3-201ENST00000305510 ABCC5O15440 1437 aa24.08■■□□□ 1.45
CNNM3-201ENST00000305510 DAPK1P53355 1430 aa24.08■■□□□ 1.45
CNNM3-201ENST00000305510 USP47Q96K76 1375 aa24.08■■□□□ 1.45
CNNM3-201ENST00000305510 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
CNNM3-201ENST00000305510 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
CNNM3-201ENST00000305510 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
CNNM3-201ENST00000305510 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
CNNM3-201ENST00000305510 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
CNNM3-201ENST00000305510 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
CNNM3-201ENST00000305510 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
CNNM3-201ENST00000305510 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
CNNM3-201ENST00000305510 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
CNNM3-201ENST00000305510 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
CNNM3-201ENST00000305510 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
CNNM3-201ENST00000305510 HECW1Q76N89 1606 aa23.98■■□□□ 1.43
CNNM3-201ENST00000305510 NBPF1Q3BBV0 1214 aa23.97■■□□□ 1.43
CNNM3-201ENST00000305510 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
CNNM3-201ENST00000305510 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
CNNM3-201ENST00000305510 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
CNNM3-201ENST00000305510 LRRIQ1Q96JM4 1722 aa23.95■■□□□ 1.42
CNNM3-201ENST00000305510 WASHC2CQ9Y4E1 1318 aa23.94■■□□□ 1.42
CNNM3-201ENST00000305510 NCOA1Q15788 1441 aa23.94■■□□□ 1.42
CNNM3-201ENST00000305510 ANKRD50Q9ULJ7 1429 aa23.92■■□□□ 1.42
CNNM3-201ENST00000305510 ROCK2O75116 1388 aaKnown RBP23.92■■□□□ 1.42
CNNM3-201ENST00000305510 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
CNNM3-201ENST00000305510 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
CNNM3-201ENST00000305510 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
CNNM3-201ENST00000305510 PLIN1O60240 522 aa23.91■■□□□ 1.42
CNNM3-201ENST00000305510 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
CNNM3-201ENST00000305510 GSE1Q14687 1217 aa23.9■■□□□ 1.42
CNNM3-201ENST00000305510 RPRD2Q5VT52 1461 aaKnown RBP23.9■■□□□ 1.42
CNNM3-201ENST00000305510 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
CNNM3-201ENST00000305510 KDM5BQ9UGL1 1544 aa23.86■■□□□ 1.41
CNNM3-201ENST00000305510 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
CNNM3-201ENST00000305510 TROQ12816 1431 aaPredicted RBP23.85■■□□□ 1.41
CNNM3-201ENST00000305510 CDCA7LQ96GN5 454 aa23.85■■□□□ 1.41
CNNM3-201ENST00000305510 TCOF1Q13428 1488 aaKnown RBP23.84■■□□□ 1.41
CNNM3-201ENST00000305510 PNISRQ8TF01 805 aaKnown RBP23.84■■□□□ 1.41
CNNM3-201ENST00000305510 SKAP1Q86WV1 359 aa23.83■■□□□ 1.41
CNNM3-201ENST00000305510 EXOC6Q8TAG9 804 aa23.83■■□□□ 1.41
CNNM3-201ENST00000305510 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
CNNM3-201ENST00000305510 CAMSAP2Q08AD1 1489 aa23.83■■□□□ 1.4
CNNM3-201ENST00000305510 KIAA1107Q9UPP5 1409 aa23.82■■□□□ 1.4
CNNM3-201ENST00000305510 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
CNNM3-201ENST00000305510 RSPH6AQ9H0K4 717 aa23.82■■□□□ 1.4
CNNM3-201ENST00000305510 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
CNNM3-201ENST00000305510 WDR62O43379 1518 aa23.81■■□□□ 1.4
CNNM3-201ENST00000305510 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
CNNM3-201ENST00000305510 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
CNNM3-201ENST00000305510 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
CNNM3-201ENST00000305510 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
CNNM3-201ENST00000305510 PANK3Q9H999 370 aa23.79■■□□□ 1.4
CNNM3-201ENST00000305510 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
CNNM3-201ENST00000305510 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms