RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
CHAF1A-201ENST00000301280 KDM6BO15054 1643 aa21.97■■□□□ 1.11
CHAF1A-201ENST00000301280 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
CHAF1A-201ENST00000301280 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
CHAF1A-201ENST00000301280 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
CHAF1A-201ENST00000301280 CROCC2H7BZ55 1655 aa21.94■■□□□ 1.1
CHAF1A-201ENST00000301280 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
CHAF1A-201ENST00000301280 NUP153P49790 1475 aaKnown RBP21.93■■□□□ 1.1
CHAF1A-201ENST00000301280 ADGBQ8N7X0 1667 aa21.91■■□□□ 1.1
CHAF1A-201ENST00000301280 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
CHAF1A-201ENST00000301280 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
CHAF1A-201ENST00000301280 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
CHAF1A-201ENST00000301280 POLR1AO95602 1720 aaPredicted RBP21.88■■□□□ 1.09
CHAF1A-201ENST00000301280 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
CHAF1A-201ENST00000301280 KDM2AQ9Y2K7 1162 aa21.88■■□□□ 1.09
CHAF1A-201ENST00000301280 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
CHAF1A-201ENST00000301280 NEFLP07196 543 aa21.86■■□□□ 1.09
CHAF1A-201ENST00000301280 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
CHAF1A-201ENST00000301280 NUP160Q12769 1436 aa21.84■■□□□ 1.09
CHAF1A-201ENST00000301280 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
CHAF1A-201ENST00000301280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.086e-7■■■■□ 26.2
CHAF1A-201ENST00000301280 DAPK1P53355 1430 aa21.79■■□□□ 1.08
CHAF1A-201ENST00000301280 HSPA5P11021 654 aaKnown RBP21.79■■□□□ 1.08
CHAF1A-201ENST00000301280 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
CHAF1A-201ENST00000301280 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
CHAF1A-201ENST00000301280 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
CHAF1A-201ENST00000301280 ABCA8O94911 1581 aa21.77■■□□□ 1.08
CHAF1A-201ENST00000301280 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.07
CHAF1A-201ENST00000301280 MYT1LQ9UL68 1186 aa21.76■■□□□ 1.07
CHAF1A-201ENST00000301280 ADGRL2O95490 1459 aa21.76■■□□□ 1.07
CHAF1A-201ENST00000301280 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
CHAF1A-201ENST00000301280 ABCC5O15440 1437 aa21.75■■□□□ 1.07
CHAF1A-201ENST00000301280 SALL2Q9Y467 1007 aaPredicted RBP21.73■■□□□ 1.07
CHAF1A-201ENST00000301280 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
CHAF1A-201ENST00000301280 KIF14Q15058 1648 aa21.73■■□□□ 1.07
CHAF1A-201ENST00000301280 TROQ12816 1431 aaPredicted RBP21.71■■□□□ 1.07
CHAF1A-201ENST00000301280 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
CHAF1A-201ENST00000301280 EIF4G2P78344 907 aaKnown RBP eCLIP21.68■■□□□ 1.067e-7■□□□□ 8.7
CHAF1A-201ENST00000301280 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
CHAF1A-201ENST00000301280 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
CHAF1A-201ENST00000301280 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
CHAF1A-201ENST00000301280 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
CHAF1A-201ENST00000301280 CCER2I3L3R5 266 aa21.66■■□□□ 1.06
CHAF1A-201ENST00000301280 GPATCH8Q9UKJ3 1502 aaKnown RBP21.66■■□□□ 1.06
CHAF1A-201ENST00000301280 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
CHAF1A-201ENST00000301280 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.06
CHAF1A-201ENST00000301280 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
CHAF1A-201ENST00000301280 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
CHAF1A-201ENST00000301280 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.051e-6■■■□□ 14.6
CHAF1A-201ENST00000301280 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
CHAF1A-201ENST00000301280 KDM5DQ9BY66 1539 aa21.62■■□□□ 1.05
CHAF1A-201ENST00000301280 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
CHAF1A-201ENST00000301280 MBD5Q9P267 1494 aa21.62■■□□□ 1.05
CHAF1A-201ENST00000301280 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
CHAF1A-201ENST00000301280 PZPP20742 1482 aa21.62■■□□□ 1.05
CHAF1A-201ENST00000301280 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
CHAF1A-201ENST00000301280 PLB1Q6P1J6 1458 aa21.6■■□□□ 1.05
CHAF1A-201ENST00000301280 PKD2Q13563 968 aa21.6■■□□□ 1.05
CHAF1A-201ENST00000301280 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
CHAF1A-201ENST00000301280 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
CHAF1A-201ENST00000301280 NBPF8Q3BBV2 869 aa21.57■■□□□ 1.04
CHAF1A-201ENST00000301280 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
CHAF1A-201ENST00000301280 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
CHAF1A-201ENST00000301280 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
CHAF1A-201ENST00000301280 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
CHAF1A-201ENST00000301280 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
CHAF1A-201ENST00000301280 TSPY4P0CV99 314 aa21.54■■□□□ 1.04
CHAF1A-201ENST00000301280 TSPY10P0CW01 314 aa21.54■■□□□ 1.04
CHAF1A-201ENST00000301280 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
CHAF1A-201ENST00000301280 PREX2Q70Z35 1606 aa21.53■■□□□ 1.04
CHAF1A-201ENST00000301280 CHD1O14646 1710 aa21.5■■□□□ 1.03
CHAF1A-201ENST00000301280 ATP10BO94823 1461 aa21.5■■□□□ 1.03
CHAF1A-201ENST00000301280 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
CHAF1A-201ENST00000301280 MAST1Q9Y2H9 1570 aa21.47■■□□□ 1.03
CHAF1A-201ENST00000301280 PTPRGP23470 1445 aa21.45■■□□□ 1.02
CHAF1A-201ENST00000301280 ANP32EQ9BTT0 268 aa21.44■■□□□ 1.02
CHAF1A-201ENST00000301280 CNTLNQ9NXG0 1405 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 KDM5CP41229 1560 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 ARHGEF12Q9NZN5 1544 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
CHAF1A-201ENST00000301280 NUP155O75694 1391 aa21.41■■□□□ 1.02
CHAF1A-201ENST00000301280 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
CHAF1A-201ENST00000301280 UNC13BO14795 1591 aa21.39■■□□□ 1.01
CHAF1A-201ENST00000301280 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
CHAF1A-201ENST00000301280 B4GALNT3Q6L9W6 998 aa21.36■■□□□ 1.01
CHAF1A-201ENST00000301280 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
CHAF1A-201ENST00000301280 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
CHAF1A-201ENST00000301280 ANKRD30AQ9BXX3 1397 aa21.34■■□□□ 1.01
CHAF1A-201ENST00000301280 E9PCH4 1651 aa21.34■■□□□ 1.01
CHAF1A-201ENST00000301280 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1
CHAF1A-201ENST00000301280 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
CHAF1A-201ENST00000301280 TMC1Q8TDI8 760 aa21.32■■□□□ 1
CHAF1A-201ENST00000301280 ANKRD50Q9ULJ7 1429 aa21.32■■□□□ 1
CHAF1A-201ENST00000301280 KIF7Q2M1P5 1343 aa21.31■■□□□ 1
CHAF1A-201ENST00000301280 PRKRIP1Q9H875 184 aaPredicted RBP21.31■■□□□ 1
CHAF1A-201ENST00000301280 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
CHAF1A-201ENST00000301280 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
CHAF1A-201ENST00000301280 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms