RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 NESP48681 1621 aa13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 BACH2Q9BYV9 841 aa13.69□□□□□ -0.22
ARHGEF3-201ENST00000296315 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF3-201ENST00000296315 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
ARHGEF3-201ENST00000296315 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
ARHGEF3-201ENST00000296315 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF3-201ENST00000296315 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
ARHGEF3-201ENST00000296315 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
ARHGEF3-201ENST00000296315 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
ARHGEF3-201ENST00000296315 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
ARHGEF3-201ENST00000296315 NAIPQ13075 1403 aa13.64□□□□□ -0.23
ARHGEF3-201ENST00000296315 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
ARHGEF3-201ENST00000296315 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF3-201ENST00000296315 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
ARHGEF3-201ENST00000296315 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
ARHGEF3-201ENST00000296315 CFTRP13569 1480 aa13.62□□□□□ -0.23
ARHGEF3-201ENST00000296315 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
ARHGEF3-201ENST00000296315 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
ARHGEF3-201ENST00000296315 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
ARHGEF3-201ENST00000296315 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
ARHGEF3-201ENST00000296315 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
ARHGEF3-201ENST00000296315 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF3-201ENST00000296315 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF3-201ENST00000296315 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
ARHGEF3-201ENST00000296315 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
ARHGEF3-201ENST00000296315 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
ARHGEF3-201ENST00000296315 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF3-201ENST00000296315 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
ARHGEF3-201ENST00000296315 WASHC2CQ9Y4E1 1318 aa13.56□□□□□ -0.24
ARHGEF3-201ENST00000296315 USP47Q96K76 1375 aa13.56□□□□□ -0.24
ARHGEF3-201ENST00000296315 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
ARHGEF3-201ENST00000296315 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
ARHGEF3-201ENST00000296315 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
ARHGEF3-201ENST00000296315 POGKQ9P215 609 aa13.54□□□□□ -0.24
ARHGEF3-201ENST00000296315 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
ARHGEF3-201ENST00000296315 PKD2Q13563 968 aa13.53□□□□□ -0.24
ARHGEF3-201ENST00000296315 MYOM3Q5VTT5 1437 aa13.52□□□□□ -0.24
ARHGEF3-201ENST00000296315 PTPN23Q9H3S7 1636 aa13.52□□□□□ -0.24
ARHGEF3-201ENST00000296315 MS4A1P11836 297 aa13.52□□□□□ -0.25
ARHGEF3-201ENST00000296315 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
ARHGEF3-201ENST00000296315 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
ARHGEF3-201ENST00000296315 CASKIN1Q8WXD9 1431 aa13.5□□□□□ -0.25
ARHGEF3-201ENST00000296315 HMGXB3Q12766 1538 aa13.5□□□□□ -0.25
ARHGEF3-201ENST00000296315 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
ARHGEF3-201ENST00000296315 PKNOX2Q96KN3 472 aa13.48□□□□□ -0.25
ARHGEF3-201ENST00000296315 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
ARHGEF3-201ENST00000296315 MAP3K1Q13233 1512 aa13.48□□□□□ -0.25
ARHGEF3-201ENST00000296315 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
ARHGEF3-201ENST00000296315 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
ARHGEF3-201ENST00000296315 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
ARHGEF3-201ENST00000296315 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
ARHGEF3-201ENST00000296315 KDM5BQ9UGL1 1544 aa13.45□□□□□ -0.26
ARHGEF3-201ENST00000296315 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
ARHGEF3-201ENST00000296315 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
ARHGEF3-201ENST00000296315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
ARHGEF3-201ENST00000296315 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
ARHGEF3-201ENST00000296315 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
ARHGEF3-201ENST00000296315 RRAGDQ9NQL2 400 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF3-201ENST00000296315 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
ARHGEF3-201ENST00000296315 RALBP1Q15311 655 aa13.43□□□□□ -0.26
ARHGEF3-201ENST00000296315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■□□□ 12.8
ARHGEF3-201ENST00000296315 ANKRD30BQ9BXX2 1392 aa13.42□□□□□ -0.26
ARHGEF3-201ENST00000296315 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
ARHGEF3-201ENST00000296315 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF3-201ENST00000296315 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
ARHGEF3-201ENST00000296315 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
ARHGEF3-201ENST00000296315 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
ARHGEF3-201ENST00000296315 ARID3AQ99856 593 aa13.41□□□□□ -0.26
ARHGEF3-201ENST00000296315 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF3-201ENST00000296315 KDM6BO15054 1643 aa13.39□□□□□ -0.27
ARHGEF3-201ENST00000296315 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
ARHGEF3-201ENST00000296315 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
ARHGEF3-201ENST00000296315 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF3-201ENST00000296315 PDE3BQ13370 1112 aa13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 PANK3Q9H999 370 aa13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF3-201ENST00000296315 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF3-201ENST00000296315 SEC24BO95487 1268 aa13.37□□□□□ -0.27
ARHGEF3-201ENST00000296315 BECN1Q14457 450 aa13.37□□□□□ -0.27
ARHGEF3-201ENST00000296315 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF3-201ENST00000296315 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 BCAR3O75815 825 aa13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
ARHGEF3-201ENST00000296315 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
ARHGEF3-201ENST00000296315 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
ARHGEF3-201ENST00000296315 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
ARHGEF3-201ENST00000296315 RPRD2Q5VT52 1461 aaKnown RBP13.34□□□□□ -0.27
ARHGEF3-201ENST00000296315 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
ARHGEF3-201ENST00000296315 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
ARHGEF3-201ENST00000296315 GOLGA6L3A6NEY3 463 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms