RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
TUBGCP3-201ENST00000261965 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
TUBGCP3-201ENST00000261965 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
TUBGCP3-201ENST00000261965 PKD2Q13563 968 aa18.89■□□□□ 0.61
TUBGCP3-201ENST00000261965 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
TUBGCP3-201ENST00000261965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.614e-17■■■■■ 27.2
TUBGCP3-201ENST00000261965 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
TUBGCP3-201ENST00000261965 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.87■□□□□ 0.61
TUBGCP3-201ENST00000261965 RGL3Q3MIN7 710 aa18.87■□□□□ 0.61
TUBGCP3-201ENST00000261965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
TUBGCP3-201ENST00000261965 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.61
TUBGCP3-201ENST00000261965 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.61
TUBGCP3-201ENST00000261965 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.61
TUBGCP3-201ENST00000261965 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.6
TUBGCP3-201ENST00000261965 MAGI3Q5TCQ9 1506 aa18.8■□□□□ 0.6
TUBGCP3-201ENST00000261965 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
TUBGCP3-201ENST00000261965 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
TUBGCP3-201ENST00000261965 AKNAQ7Z591 1439 aa18.77■□□□□ 0.6
TUBGCP3-201ENST00000261965 KDM6BO15054 1643 aa18.77■□□□□ 0.6
TUBGCP3-201ENST00000261965 NEFMP07197 916 aa18.77■□□□□ 0.6
TUBGCP3-201ENST00000261965 SUPT6HQ7KZ85 1726 aaKnown RBP18.76■□□□□ 0.59
TUBGCP3-201ENST00000261965 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
TUBGCP3-201ENST00000261965 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
TUBGCP3-201ENST00000261965 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
TUBGCP3-201ENST00000261965 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
TUBGCP3-201ENST00000261965 CUL7Q14999 1698 aa18.73■□□□□ 0.59
TUBGCP3-201ENST00000261965 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
TUBGCP3-201ENST00000261965 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 TSPY4P0CV99 314 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 TSPY10P0CW01 314 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.594e-6■■■■□ 22.9
TUBGCP3-201ENST00000261965 USP47Q96K76 1375 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
TUBGCP3-201ENST00000261965 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
TUBGCP3-201ENST00000261965 NUP155O75694 1391 aa18.7■□□□□ 0.58
TUBGCP3-201ENST00000261965 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
TUBGCP3-201ENST00000261965 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
TUBGCP3-201ENST00000261965 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
TUBGCP3-201ENST00000261965 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
TUBGCP3-201ENST00000261965 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
TUBGCP3-201ENST00000261965 NUDCQ9Y266 331 aa18.68■□□□□ 0.58
TUBGCP3-201ENST00000261965 DAPK1P53355 1430 aa18.67■□□□□ 0.58
TUBGCP3-201ENST00000261965 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
TUBGCP3-201ENST00000261965 ABCC5O15440 1437 aa18.67■□□□□ 0.58
TUBGCP3-201ENST00000261965 FANCIQ9NVI1 1328 aa18.67■□□□□ 0.58
TUBGCP3-201ENST00000261965 SLC4A3P48751 1232 aa18.67■□□□□ 0.58
TUBGCP3-201ENST00000261965 RGS3P49796 1198 aa18.65■□□□□ 0.58
TUBGCP3-201ENST00000261965 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
TUBGCP3-201ENST00000261965 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
TUBGCP3-201ENST00000261965 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
TUBGCP3-201ENST00000261965 PLIN1O60240 522 aa18.62■□□□□ 0.57
TUBGCP3-201ENST00000261965 LRRIQ1Q96JM4 1722 aa18.62■□□□□ 0.57
TUBGCP3-201ENST00000261965 ANO8Q9HCE9 1232 aaPredicted RBP18.62■□□□□ 0.57
TUBGCP3-201ENST00000261965 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
TUBGCP3-201ENST00000261965 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
TUBGCP3-201ENST00000261965 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
TUBGCP3-201ENST00000261965 MIA2Q96PC5 1412 aa18.59■□□□□ 0.57
TUBGCP3-201ENST00000261965 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
TUBGCP3-201ENST00000261965 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
TUBGCP3-201ENST00000261965 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.57
TUBGCP3-201ENST00000261965 ERICH6BQ5W0A0 696 aa18.58■□□□□ 0.56
TUBGCP3-201ENST00000261965 IQGAP2Q13576 1575 aa18.58■□□□□ 0.56
TUBGCP3-201ENST00000261965 HECW1Q76N89 1606 aa18.58■□□□□ 0.56
TUBGCP3-201ENST00000261965 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
TUBGCP3-201ENST00000261965 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
TUBGCP3-201ENST00000261965 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
TUBGCP3-201ENST00000261965 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
TUBGCP3-201ENST00000261965 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
TUBGCP3-201ENST00000261965 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
TUBGCP3-201ENST00000261965 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
TUBGCP3-201ENST00000261965 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
TUBGCP3-201ENST00000261965 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
TUBGCP3-201ENST00000261965 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.55
TUBGCP3-201ENST00000261965 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
TUBGCP3-201ENST00000261965 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
TUBGCP3-201ENST00000261965 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
TUBGCP3-201ENST00000261965 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
TUBGCP3-201ENST00000261965 NUP153P49790 1475 aaKnown RBP18.48■□□□□ 0.55
TUBGCP3-201ENST00000261965 KIAA1107Q9UPP5 1409 aa18.48■□□□□ 0.55
TUBGCP3-201ENST00000261965 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
TUBGCP3-201ENST00000261965 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
TUBGCP3-201ENST00000261965 SPRYD3Q8NCJ5 442 aa18.47■□□□□ 0.55
TUBGCP3-201ENST00000261965 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
TUBGCP3-201ENST00000261965 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
TUBGCP3-201ENST00000261965 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.54
TUBGCP3-201ENST00000261965 WDR62O43379 1518 aa18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 PANK3Q9H999 370 aa18.45■□□□□ 0.54
TUBGCP3-201ENST00000261965 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
TUBGCP3-201ENST00000261965 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
TUBGCP3-201ENST00000261965 PZPP20742 1482 aa18.44■□□□□ 0.54
TUBGCP3-201ENST00000261965 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
TUBGCP3-201ENST00000261965 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
TUBGCP3-201ENST00000261965 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
TUBGCP3-201ENST00000261965 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms