RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 KANK1Q14678 1352 aa24.99■■□□□ 1.59
PPFIA1-201ENST00000253925 NEUROD2Q15784 382 aa24.99■■□□□ 1.59
PPFIA1-201ENST00000253925 PRKRIP1Q9H875 184 aaPredicted RBP24.99■■□□□ 1.59
PPFIA1-201ENST00000253925 RCAN3Q9UKA8 241 aa24.99■■□□□ 1.59
PPFIA1-201ENST00000253925 RGS3P49796 1198 aa24.98■■□□□ 1.59
PPFIA1-201ENST00000253925 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
PPFIA1-201ENST00000253925 CFTRP13569 1480 aa24.98■■□□□ 1.59
PPFIA1-201ENST00000253925 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
PPFIA1-201ENST00000253925 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
PPFIA1-201ENST00000253925 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.59
PPFIA1-201ENST00000253925 LAS1LQ9Y4W2 734 aaKnown RBP24.95■■□□□ 1.59
PPFIA1-201ENST00000253925 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.59
PPFIA1-201ENST00000253925 FTSJ3Q8IY81 847 aaKnown RBP24.95■■□□□ 1.58
PPFIA1-201ENST00000253925 CUX1P39880 1505 aa24.95■■□□□ 1.58
PPFIA1-201ENST00000253925 GAPVD1Q14C86 1478 aa24.93■■□□□ 1.58
PPFIA1-201ENST00000253925 NLRP13Q86W25 1043 aa24.92■■□□□ 1.58
PPFIA1-201ENST00000253925 FRAT1Q92837 279 aaPredicted RBP24.91■■□□□ 1.58
PPFIA1-201ENST00000253925 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
PPFIA1-201ENST00000253925 TCERG1O14776 1098 aaKnown RBP24.89■■□□□ 1.58
PPFIA1-201ENST00000253925 ZBED9Q6R2W3 1325 aa24.89■■□□□ 1.58
PPFIA1-201ENST00000253925 PDE3BQ13370 1112 aa24.89■■□□□ 1.57
PPFIA1-201ENST00000253925 HNRNPMP52272 730 aaKnown RBP eCLIP24.88■■□□□ 1.573e-8■■■■■ 30.9
PPFIA1-201ENST00000253925 EFCAB2Q5VUJ9 269 aa24.88■■□□□ 1.57
PPFIA1-201ENST00000253925 MS4A1P11836 297 aa24.88■■□□□ 1.57
PPFIA1-201ENST00000253925 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
PPFIA1-201ENST00000253925 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
PPFIA1-201ENST00000253925 TNNT2P45379 298 aaPredicted RBP24.87■■□□□ 1.57
PPFIA1-201ENST00000253925 KIF15Q9NS87 1388 aa24.87■■□□□ 1.57
PPFIA1-201ENST00000253925 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
PPFIA1-201ENST00000253925 ST20-MTHFSA0A0A6YYL1 179 aa24.82■■□□□ 1.56
PPFIA1-201ENST00000253925 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
PPFIA1-201ENST00000253925 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
PPFIA1-201ENST00000253925 NCOA2Q15596 1464 aa24.81■■□□□ 1.56
PPFIA1-201ENST00000253925 USP47Q96K76 1375 aa24.81■■□□□ 1.56
PPFIA1-201ENST00000253925 MORC1Q86VD1 984 aa24.81■■□□□ 1.56
PPFIA1-201ENST00000253925 POGKQ9P215 609 aa24.8■■□□□ 1.56
PPFIA1-201ENST00000253925 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 EFCAB5A4FU69 1503 aa24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 PNNQ9H307 717 aaKnown RBP24.76■■□□□ 1.55
PPFIA1-201ENST00000253925 GOLGA6L22H0YM25 854 aa24.75■■□□□ 1.55
PPFIA1-201ENST00000253925 NAP1L5Q96NT1 182 aaPredicted RBP24.75■■□□□ 1.55
PPFIA1-201ENST00000253925 CCDC144AA2RUR9 1427 aa24.74■■□□□ 1.55
PPFIA1-201ENST00000253925 IPO9Q96P70 1041 aaKnown RBP24.73■■□□□ 1.55
PPFIA1-201ENST00000253925 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
PPFIA1-201ENST00000253925 EIF3AQ14152 1382 aaKnown RBP24.73■■□□□ 1.55
PPFIA1-201ENST00000253925 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.72■■□□□ 1.55
PPFIA1-201ENST00000253925 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
PPFIA1-201ENST00000253925 TRIM44Q96DX7 344 aaPredicted RBP24.71■■□□□ 1.55
PPFIA1-201ENST00000253925 ARID4BQ4LE39 1312 aaPredicted RBP24.71■■□□□ 1.55
PPFIA1-201ENST00000253925 GOLGA2Q08379 1002 aa24.7■■□□□ 1.54
PPFIA1-201ENST00000253925 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
PPFIA1-201ENST00000253925 WASHC2AQ641Q2 1341 aa24.69■■□□□ 1.54
PPFIA1-201ENST00000253925 FANCIQ9NVI1 1328 aa24.66■■□□□ 1.54
PPFIA1-201ENST00000253925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.66■■□□□ 1.541e-6■■□□□ 13.1
PPFIA1-201ENST00000253925 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
PPFIA1-201ENST00000253925 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
PPFIA1-201ENST00000253925 SRPK2P78362 688 aaKnown RBP24.65■■□□□ 1.54
PPFIA1-201ENST00000253925 SPAG9O60271 1321 aaKnown RBP24.65■■□□□ 1.54
PPFIA1-201ENST00000253925 GGT6Q6P531 493 aa24.63■■□□□ 1.53
PPFIA1-201ENST00000253925 PANK3Q9H999 370 aa24.63■■□□□ 1.53
PPFIA1-201ENST00000253925 CASC1Q6TDU7 716 aa24.63■■□□□ 1.53
PPFIA1-201ENST00000253925 KIF3BO15066 747 aa24.62■■□□□ 1.53
PPFIA1-201ENST00000253925 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
PPFIA1-201ENST00000253925 RRP1P56182 461 aaKnown RBP24.6■■□□□ 1.53
PPFIA1-201ENST00000253925 PTPRGP23470 1445 aa24.6■■□□□ 1.53
PPFIA1-201ENST00000253925 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
PPFIA1-201ENST00000253925 EHBP1L1Q8N3D4 1523 aa24.58■■□□□ 1.52
PPFIA1-201ENST00000253925 U2AF1L5P0DN76 240 aaPredicted RBP24.56■■□□□ 1.52
PPFIA1-201ENST00000253925 U2AF1Q01081 240 aaKnown RBP eCLIP24.56■■□□□ 1.527e-8■■■■■ 45.8
PPFIA1-201ENST00000253925 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
PPFIA1-201ENST00000253925 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
PPFIA1-201ENST00000253925 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.522e-6■■■■■ 27
PPFIA1-201ENST00000253925 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
PPFIA1-201ENST00000253925 RWDD1Q9H446 243 aaPredicted RBP24.55■■□□□ 1.52
PPFIA1-201ENST00000253925 MIA2Q96PC5 1412 aa24.55■■□□□ 1.52
PPFIA1-201ENST00000253925 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
PPFIA1-201ENST00000253925 NCLP19338 710 aaKnown RBP24.54■■□□□ 1.52
PPFIA1-201ENST00000253925 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
PPFIA1-201ENST00000253925 MAP3K1Q13233 1512 aa24.54■■□□□ 1.52
PPFIA1-201ENST00000253925 IPO8O15397 1037 aaKnown RBP24.53■■□□□ 1.52
PPFIA1-201ENST00000253925 EXOC6Q8TAG9 804 aa24.53■■□□□ 1.52
PPFIA1-201ENST00000253925 HSCBQ8IWL3 235 aa24.52■■□□□ 1.52
PPFIA1-201ENST00000253925 HSP90AB1P08238 724 aaKnown RBP24.52■■□□□ 1.52
PPFIA1-201ENST00000253925 PMFBP1Q8TBY8 1022 aa24.51■■□□□ 1.51
PPFIA1-201ENST00000253925 CCDC146Q8IYE0 955 aa24.51■■□□□ 1.51
PPFIA1-201ENST00000253925 HDGFL2Q7Z4V5 671 aaPredicted RBP24.51■■□□□ 1.51
PPFIA1-201ENST00000253925 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
PPFIA1-201ENST00000253925 C14orf37Q86TY3 774 aa24.5■■□□□ 1.51
PPFIA1-201ENST00000253925 CENPJQ9HC77 1338 aaPredicted RBP24.49■■□□□ 1.51
PPFIA1-201ENST00000253925 PDE4AP27815 886 aa24.49■■□□□ 1.51
PPFIA1-201ENST00000253925 STK26Q9P289 416 aa24.48■■□□□ 1.51
PPFIA1-201ENST00000253925 HAP1P54257 671 aaPredicted RBP24.47■■□□□ 1.51
PPFIA1-201ENST00000253925 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
PPFIA1-201ENST00000253925 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
PPFIA1-201ENST00000253925 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
PPFIA1-201ENST00000253925 L1TD1Q5T7N2 865 aaKnown RBP24.45■■□□□ 1.5
PPFIA1-201ENST00000253925 NESP48681 1621 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms