RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
SRSF6-201ENST00000244020 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
SRSF6-201ENST00000244020 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
SRSF6-201ENST00000244020 PDE4AP27815 886 aa12.28□□□□□ -0.44
SRSF6-201ENST00000244020 USP35Q9P2H5 1018 aa12.27□□□□□ -0.45
SRSF6-201ENST00000244020 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
SRSF6-201ENST00000244020 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
SRSF6-201ENST00000244020 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
SRSF6-201ENST00000244020 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
SRSF6-201ENST00000244020 EFCAB5A4FU69 1503 aa12.24□□□□□ -0.45
SRSF6-201ENST00000244020 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
SRSF6-201ENST00000244020 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
SRSF6-201ENST00000244020 RRP1P56182 461 aaKnown RBP12.23□□□□□ -0.45
SRSF6-201ENST00000244020 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
SRSF6-201ENST00000244020 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
SRSF6-201ENST00000244020 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
SRSF6-201ENST00000244020 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
SRSF6-201ENST00000244020 ANP32BQ92688 251 aaKnown RBP12.19□□□□□ -0.46
SRSF6-201ENST00000244020 BACH2Q9BYV9 841 aa12.19□□□□□ -0.46
SRSF6-201ENST00000244020 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
SRSF6-201ENST00000244020 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
SRSF6-201ENST00000244020 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
SRSF6-201ENST00000244020 GSE1Q14687 1217 aa12.18□□□□□ -0.46
SRSF6-201ENST00000244020 USP47Q96K76 1375 aa12.18□□□□□ -0.46
SRSF6-201ENST00000244020 MS4A1P11836 297 aa12.18□□□□□ -0.46
SRSF6-201ENST00000244020 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
SRSF6-201ENST00000244020 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
SRSF6-201ENST00000244020 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
SRSF6-201ENST00000244020 PLIN1O60240 522 aa12.16□□□□□ -0.46
SRSF6-201ENST00000244020 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
SRSF6-201ENST00000244020 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
SRSF6-201ENST00000244020 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
SRSF6-201ENST00000244020 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
SRSF6-201ENST00000244020 EHBP1L1Q8N3D4 1523 aa12.14□□□□□ -0.47
SRSF6-201ENST00000244020 MYBBP1AQ9BQG0 1328 aaKnown RBP12.13□□□□□ -0.47
SRSF6-201ENST00000244020 RALBP1Q15311 655 aa12.13□□□□□ -0.47
SRSF6-201ENST00000244020 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
SRSF6-201ENST00000244020 RPRD2Q5VT52 1461 aaKnown RBP12.13□□□□□ -0.47
SRSF6-201ENST00000244020 FANCD2Q9BXW9 1451 aa12.13□□□□□ -0.47
SRSF6-201ENST00000244020 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
SRSF6-201ENST00000244020 SKAP1Q86WV1 359 aa12.13□□□□□ -0.47
SRSF6-201ENST00000244020 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
SRSF6-201ENST00000244020 PKD2Q13563 968 aa12.12□□□□□ -0.47
SRSF6-201ENST00000244020 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
SRSF6-201ENST00000244020 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
SRSF6-201ENST00000244020 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
SRSF6-201ENST00000244020 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
SRSF6-201ENST00000244020 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
SRSF6-201ENST00000244020 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
SRSF6-201ENST00000244020 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
SRSF6-201ENST00000244020 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
SRSF6-201ENST00000244020 SPATA31E1Q6ZUB1 1445 aa12.1□□□□□ -0.47
SRSF6-201ENST00000244020 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
SRSF6-201ENST00000244020 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
SRSF6-201ENST00000244020 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
SRSF6-201ENST00000244020 HECW1Q76N89 1606 aa12.1□□□□□ -0.47
SRSF6-201ENST00000244020 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
SRSF6-201ENST00000244020 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
SRSF6-201ENST00000244020 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
SRSF6-201ENST00000244020 BRD4O60885 1362 aaPredicted RBP12.08□□□□□ -0.48
SRSF6-201ENST00000244020 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 RGS3P49796 1198 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 CC2D1BQ5T0F9 858 aaKnown RBP12.08□□□□□ -0.48
SRSF6-201ENST00000244020 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
SRSF6-201ENST00000244020 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 KDM6BO15054 1643 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 ARID3AQ99856 593 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
SRSF6-201ENST00000244020 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
SRSF6-201ENST00000244020 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
SRSF6-201ENST00000244020 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
SRSF6-201ENST00000244020 CFDP1Q9UEE9 299 aaPredicted RBP12.06□□□□□ -0.48
SRSF6-201ENST00000244020 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
SRSF6-201ENST00000244020 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
SRSF6-201ENST00000244020 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
SRSF6-201ENST00000244020 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
SRSF6-201ENST00000244020 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
SRSF6-201ENST00000244020 CUL7Q14999 1698 aa12.05□□□□□ -0.48
SRSF6-201ENST00000244020 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
SRSF6-201ENST00000244020 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
SRSF6-201ENST00000244020 DAPK1P53355 1430 aa12.03□□□□□ -0.48
SRSF6-201ENST00000244020 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
SRSF6-201ENST00000244020 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
SRSF6-201ENST00000244020 FRAT2O75474 233 aaPredicted RBP12.03□□□□□ -0.48
SRSF6-201ENST00000244020 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
SRSF6-201ENST00000244020 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.48
SRSF6-201ENST00000244020 FAM161AQ3B820 660 aa12.02□□□□□ -0.48
SRSF6-201ENST00000244020 ROCK1Q13464 1354 aa12.01□□□□□ -0.49
SRSF6-201ENST00000244020 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
SRSF6-201ENST00000244020 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
SRSF6-201ENST00000244020 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
SRSF6-201ENST00000244020 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
SRSF6-201ENST00000244020 CENPQQ7L2Z9 268 aaPredicted RBP12.01□□□□□ -0.49
SRSF6-201ENST00000244020 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
SRSF6-201ENST00000244020 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
SRSF6-201ENST00000244020 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
SRSF6-201ENST00000244020 WDR43Q15061 677 aaKnown RBP eCLIP12□□□□□ -0.49
SRSF6-201ENST00000244020 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
SRSF6-201ENST00000244020 THOC2Q8NI27 1593 aaKnown RBP12□□□□□ -0.49
SRSF6-201ENST00000244020 ABCC5O15440 1437 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms