RNA–Protein interactions for RNA: ENST00000238856.8

AFTPH-202, Transcript of aftiphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFTPH, Length 4,040 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-202ENST00000238856 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
AFTPH-202ENST00000238856 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
AFTPH-202ENST00000238856 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
AFTPH-202ENST00000238856 ST20-MTHFSA0A0A6YYL1 179 aa22.01■■□□□ 1.11
AFTPH-202ENST00000238856 NOP58Q9Y2X3 529 aaKnown RBP22.01■■□□□ 1.11
AFTPH-202ENST00000238856 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
AFTPH-202ENST00000238856 WDR43Q15061 677 aaKnown RBP eCLIP21.99■■□□□ 1.11
AFTPH-202ENST00000238856 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
AFTPH-202ENST00000238856 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
AFTPH-202ENST00000238856 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
AFTPH-202ENST00000238856 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
AFTPH-202ENST00000238856 CNTLNQ9NXG0 1405 aa21.94■■□□□ 1.1
AFTPH-202ENST00000238856 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
AFTPH-202ENST00000238856 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
AFTPH-202ENST00000238856 USP47Q96K76 1375 aa21.93■■□□□ 1.1
AFTPH-202ENST00000238856 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
AFTPH-202ENST00000238856 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
AFTPH-202ENST00000238856 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
AFTPH-202ENST00000238856 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
AFTPH-202ENST00000238856 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
AFTPH-202ENST00000238856 ROCK2O75116 1388 aaKnown RBP21.88■■□□□ 1.09
AFTPH-202ENST00000238856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
AFTPH-202ENST00000238856 DEKP35659 375 aaKnown RBP21.88■■□□□ 1.09
AFTPH-202ENST00000238856 KNSTRNQ9Y448 316 aa21.87■■□□□ 1.09
AFTPH-202ENST00000238856 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
AFTPH-202ENST00000238856 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
AFTPH-202ENST00000238856 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
AFTPH-202ENST00000238856 MSH5O43196 834 aa21.84■■□□□ 1.09
AFTPH-202ENST00000238856 PLIN1O60240 522 aa21.83■■□□□ 1.08
AFTPH-202ENST00000238856 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
AFTPH-202ENST00000238856 RGS3P49796 1198 aa21.82■■□□□ 1.08
AFTPH-202ENST00000238856 EXOC6Q8TAG9 804 aa21.81■■□□□ 1.08
AFTPH-202ENST00000238856 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
AFTPH-202ENST00000238856 TNNT2P45379 298 aaPredicted RBP21.8■■□□□ 1.08
AFTPH-202ENST00000238856 AKNAQ7Z591 1439 aa21.8■■□□□ 1.08
AFTPH-202ENST00000238856 KTN1Q86UP2 1357 aaKnown RBP21.78■■□□□ 1.08
AFTPH-202ENST00000238856 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
AFTPH-202ENST00000238856 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
AFTPH-202ENST00000238856 TMF1P82094 1093 aa21.77■■□□□ 1.08
AFTPH-202ENST00000238856 RALBP1Q15311 655 aa21.77■■□□□ 1.08
AFTPH-202ENST00000238856 CARMIL2Q6F5E8 1435 aa21.76■■□□□ 1.07
AFTPH-202ENST00000238856 PTPN23Q9H3S7 1636 aa21.76■■□□□ 1.07
AFTPH-202ENST00000238856 NEFMP07197 916 aa21.76■■□□□ 1.07
AFTPH-202ENST00000238856 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.76■■□□□ 1.07
AFTPH-202ENST00000238856 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
AFTPH-202ENST00000238856 RTN4Q9NQC3 1192 aaKnown RBP21.75■■□□□ 1.07
AFTPH-202ENST00000238856 NLRP13Q86W25 1043 aa21.75■■□□□ 1.07
AFTPH-202ENST00000238856 SUPT6HQ7KZ85 1726 aaKnown RBP21.74■■□□□ 1.07
AFTPH-202ENST00000238856 EPRSP07814 1512 aaKnown RBP21.74■■□□□ 1.07
AFTPH-202ENST00000238856 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
AFTPH-202ENST00000238856 MYBBP1AQ9BQG0 1328 aaKnown RBP21.72■■□□□ 1.07
AFTPH-202ENST00000238856 PANK3Q9H999 370 aa21.72■■□□□ 1.07
AFTPH-202ENST00000238856 KIF15Q9NS87 1388 aa21.71■■□□□ 1.07
AFTPH-202ENST00000238856 IPO9Q96P70 1041 aaKnown RBP21.7■■□□□ 1.06
AFTPH-202ENST00000238856 ARXQ96QS3 562 aa21.7■■□□□ 1.06
AFTPH-202ENST00000238856 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
AFTPH-202ENST00000238856 DAPK1P53355 1430 aa21.69■■□□□ 1.06
AFTPH-202ENST00000238856 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
AFTPH-202ENST00000238856 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
AFTPH-202ENST00000238856 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
AFTPH-202ENST00000238856 RRP1P56182 461 aaKnown RBP21.67■■□□□ 1.06
AFTPH-202ENST00000238856 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
AFTPH-202ENST00000238856 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
AFTPH-202ENST00000238856 CCDC146Q8IYE0 955 aa21.66■■□□□ 1.06
AFTPH-202ENST00000238856 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
AFTPH-202ENST00000238856 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
AFTPH-202ENST00000238856 CUL7Q14999 1698 aa21.63■■□□□ 1.05
AFTPH-202ENST00000238856 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
AFTPH-202ENST00000238856 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
AFTPH-202ENST00000238856 ABCC5O15440 1437 aa21.62■■□□□ 1.05
AFTPH-202ENST00000238856 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
AFTPH-202ENST00000238856 TCERG1O14776 1098 aaKnown RBP21.6■■□□□ 1.05
AFTPH-202ENST00000238856 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
AFTPH-202ENST00000238856 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
AFTPH-202ENST00000238856 PDE4AP27815 886 aa21.59■■□□□ 1.05
AFTPH-202ENST00000238856 SLC4A3P48751 1232 aa21.59■■□□□ 1.05
AFTPH-202ENST00000238856 CRBNQ96SW2 442 aa21.59■■□□□ 1.05
AFTPH-202ENST00000238856 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
AFTPH-202ENST00000238856 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
AFTPH-202ENST00000238856 KIAA1107Q9UPP5 1409 aa21.57■■□□□ 1.04
AFTPH-202ENST00000238856 DDRGK1Q96HY6 314 aa21.57■■□□□ 1.04
AFTPH-202ENST00000238856 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
AFTPH-202ENST00000238856 SKAP1Q86WV1 359 aa21.54■■□□□ 1.04
AFTPH-202ENST00000238856 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
AFTPH-202ENST00000238856 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
AFTPH-202ENST00000238856 SAFB2Q14151 953 aaKnown RBP eCLIP21.52■■□□□ 1.04
AFTPH-202ENST00000238856 RPRD2Q5VT52 1461 aaKnown RBP21.52■■□□□ 1.04
AFTPH-202ENST00000238856 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
AFTPH-202ENST00000238856 PDE3BQ13370 1112 aa21.52■■□□□ 1.04
AFTPH-202ENST00000238856 PTPRGP23470 1445 aa21.52■■□□□ 1.04
AFTPH-202ENST00000238856 TROQ12816 1431 aaPredicted RBP21.52■■□□□ 1.04
AFTPH-202ENST00000238856 UPF2Q9HAU5 1272 aaKnown RBP21.52■■□□□ 1.03
AFTPH-202ENST00000238856 PLB1Q6P1J6 1458 aa21.51■■□□□ 1.03
AFTPH-202ENST00000238856 UGGT2Q9NYU1 1516 aa21.51■■□□□ 1.03
AFTPH-202ENST00000238856 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
AFTPH-202ENST00000238856 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
AFTPH-202ENST00000238856 GOLGA2Q08379 1002 aa21.49■■□□□ 1.03
AFTPH-202ENST00000238856 ROCK1Q13464 1354 aa21.49■■□□□ 1.03
AFTPH-202ENST00000238856 KIF3BO15066 747 aa21.49■■□□□ 1.03
AFTPH-202ENST00000238856 NPM1P06748 294 aaKnown RBP eCLIP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms