RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ZBED9Q6R2W3 1325 aa19.33■□□□□ 0.69
SFXN3-201ENST00000224807 CUL7Q14999 1698 aa19.33■□□□□ 0.68
SFXN3-201ENST00000224807 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.68
SFXN3-201ENST00000224807 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
SFXN3-201ENST00000224807 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
SFXN3-201ENST00000224807 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
SFXN3-201ENST00000224807 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
SFXN3-201ENST00000224807 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
SFXN3-201ENST00000224807 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
SFXN3-201ENST00000224807 KIF7Q2M1P5 1343 aa19.28■□□□□ 0.68
SFXN3-201ENST00000224807 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
SFXN3-201ENST00000224807 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
SFXN3-201ENST00000224807 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
SFXN3-201ENST00000224807 SLC4A1APQ9BWU0 796 aaKnown RBP19.27■□□□□ 0.68
SFXN3-201ENST00000224807 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
SFXN3-201ENST00000224807 SUPT6HQ7KZ85 1726 aaKnown RBP19.26■□□□□ 0.67
SFXN3-201ENST00000224807 PLIN1O60240 522 aa19.26■□□□□ 0.67
SFXN3-201ENST00000224807 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
SFXN3-201ENST00000224807 SAMD9Q5K651 1589 aa19.26■□□□□ 0.67
SFXN3-201ENST00000224807 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
SFXN3-201ENST00000224807 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
SFXN3-201ENST00000224807 BRPF3Q9ULD4 1205 aa19.23■□□□□ 0.67
SFXN3-201ENST00000224807 HECW1Q76N89 1606 aa19.23■□□□□ 0.67
SFXN3-201ENST00000224807 UGGT2Q9NYU1 1516 aa19.23■□□□□ 0.67
SFXN3-201ENST00000224807 ARXQ96QS3 562 aa19.22■□□□□ 0.67
SFXN3-201ENST00000224807 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
SFXN3-201ENST00000224807 KDM6BO15054 1643 aa19.21■□□□□ 0.67
SFXN3-201ENST00000224807 MAGI3Q5TCQ9 1506 aa19.21■□□□□ 0.67
SFXN3-201ENST00000224807 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
SFXN3-201ENST00000224807 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
SFXN3-201ENST00000224807 THOC2Q8NI27 1593 aaKnown RBP19.2■□□□□ 0.66
SFXN3-201ENST00000224807 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
SFXN3-201ENST00000224807 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
SFXN3-201ENST00000224807 PDE4AP27815 886 aa19.16■□□□□ 0.66
SFXN3-201ENST00000224807 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
SFXN3-201ENST00000224807 NESP48681 1621 aa19.14■□□□□ 0.65
SFXN3-201ENST00000224807 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
SFXN3-201ENST00000224807 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
SFXN3-201ENST00000224807 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
SFXN3-201ENST00000224807 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
SFXN3-201ENST00000224807 RCAN3Q9UKA8 241 aa19.08■□□□□ 0.65
SFXN3-201ENST00000224807 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
SFXN3-201ENST00000224807 RGS3P49796 1198 aa19.06■□□□□ 0.64
SFXN3-201ENST00000224807 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
SFXN3-201ENST00000224807 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
SFXN3-201ENST00000224807 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
SFXN3-201ENST00000224807 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
SFXN3-201ENST00000224807 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
SFXN3-201ENST00000224807 ANKRD30BQ9BXX2 1392 aa19.05■□□□□ 0.64
SFXN3-201ENST00000224807 RPRD2Q5VT52 1461 aaKnown RBP19.05■□□□□ 0.64
SFXN3-201ENST00000224807 TEX14Q8IWB6 1497 aa19.05■□□□□ 0.64
SFXN3-201ENST00000224807 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
SFXN3-201ENST00000224807 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
SFXN3-201ENST00000224807 MIA2Q96PC5 1412 aa19.02■□□□□ 0.64
SFXN3-201ENST00000224807 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.64
SFXN3-201ENST00000224807 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.64
SFXN3-201ENST00000224807 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
SFXN3-201ENST00000224807 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
SFXN3-201ENST00000224807 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
SFXN3-201ENST00000224807 RGL3Q3MIN7 710 aa19■□□□□ 0.63
SFXN3-201ENST00000224807 ST20-MTHFSA0A0A6YYL1 179 aa18.99■□□□□ 0.63
SFXN3-201ENST00000224807 CRBNQ96SW2 442 aa18.99■□□□□ 0.63
SFXN3-201ENST00000224807 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
SFXN3-201ENST00000224807 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
SFXN3-201ENST00000224807 USP47Q96K76 1375 aa18.97■□□□□ 0.63
SFXN3-201ENST00000224807 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
SFXN3-201ENST00000224807 PKD2Q13563 968 aa18.97■□□□□ 0.63
SFXN3-201ENST00000224807 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
SFXN3-201ENST00000224807 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
SFXN3-201ENST00000224807 C20orf194Q5TEA3 1177 aa18.95■□□□□ 0.62
SFXN3-201ENST00000224807 DAPK1P53355 1430 aa18.95■□□□□ 0.62
SFXN3-201ENST00000224807 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
SFXN3-201ENST00000224807 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
SFXN3-201ENST00000224807 GSE1Q14687 1217 aa18.94■□□□□ 0.62
SFXN3-201ENST00000224807 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
SFXN3-201ENST00000224807 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
SFXN3-201ENST00000224807 ABCC5O15440 1437 aa18.92■□□□□ 0.62
SFXN3-201ENST00000224807 WDR62O43379 1518 aa18.91■□□□□ 0.62
SFXN3-201ENST00000224807 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
SFXN3-201ENST00000224807 BCORL1Q5H9F3 1711 aa18.9■□□□□ 0.62
SFXN3-201ENST00000224807 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
SFXN3-201ENST00000224807 IQGAP2Q13576 1575 aa18.89■□□□□ 0.61
SFXN3-201ENST00000224807 SPRYD3Q8NCJ5 442 aa18.86■□□□□ 0.61
SFXN3-201ENST00000224807 SLKQ9H2G2 1235 aaPredicted RBP18.86■□□□□ 0.61
SFXN3-201ENST00000224807 PZPP20742 1482 aa18.86■□□□□ 0.61
SFXN3-201ENST00000224807 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
SFXN3-201ENST00000224807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.617e-6■□□□□ 10.8
SFXN3-201ENST00000224807 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
SFXN3-201ENST00000224807 CFDP1Q9UEE9 299 aaPredicted RBP18.82■□□□□ 0.6
SFXN3-201ENST00000224807 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
SFXN3-201ENST00000224807 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
SFXN3-201ENST00000224807 KDM5CP41229 1560 aa18.8■□□□□ 0.6
SFXN3-201ENST00000224807 USP35Q9P2H5 1018 aa18.8■□□□□ 0.6
SFXN3-201ENST00000224807 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
SFXN3-201ENST00000224807 KIF14Q15058 1648 aa18.78■□□□□ 0.6
SFXN3-201ENST00000224807 FBLN2P98095 1184 aa18.78■□□□□ 0.6
SFXN3-201ENST00000224807 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
SFXN3-201ENST00000224807 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
SFXN3-201ENST00000224807 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
SFXN3-201ENST00000224807 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms