RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 VgfQ0VGU4 617 aa11.82□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Senp3Q9EP97 568 aaKnown RBP11.81□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Becn1O88597 448 aa11.8□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Mre11Q61216 706 aa11.79□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Ush1cQ9ES64 910 aa11.79□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Gm6268A2A3U9 297 aa11.78□□□□□ -0.52
Ttc28-206ENSMUST00000156290 KnstrnQ9D9Z1 312 aaKnown RBP11.78□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Casc1Q6TDU8 730 aa11.77□□□□□ -0.52
Ttc28-206ENSMUST00000156290 EspnQ9ET47 871 aa11.77□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Fhad1A6PWD2 1420 aa11.77□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Sox12Q04890 314 aa11.77□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Dbr1Q923B1 550 aa11.76□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Kif27Q7M6Z4 1394 aa11.76□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Sin3aQ60520 1274 aaKnown RBP11.76□□□□□ -0.53
Ttc28-206ENSMUST00000156290 SetQ9EQU5 289 aaKnown RBP11.75□□□□□ -0.53
Ttc28-206ENSMUST00000156290 RdxP26043 583 aaKnown RBP11.75□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Aebp1Q640N1 1128 aa11.74□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Pds5bQ4VA53 1446 aaKnown RBP11.74□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Map4P27546 1125 aaKnown RBP11.74□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Glipr1l2Q9CQ35 332 aa11.74□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Erich6bQ9D4S6 220 aa11.73□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Clstn1Q9EPL2 979 aa11.73□□□□□ -0.53
Ttc28-206ENSMUST00000156290 SafbD3YXK2 937 aaKnown RBP11.72□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Ipo4Q8VI75 1082 aa11.72□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Ifit1bl1D3Z6F0 470 aa11.72□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Cabp1Q9JLK7 227 aa11.72□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Tpm2P58774 284 aa11.71□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Trak1Q6PD31 939 aa11.71□□□□□ -0.53
Ttc28-206ENSMUST00000156290 Wwc2Q6NXJ0 1187 aa11.71□□□□□ -0.53
Ttc28-206ENSMUST00000156290 CntlnA2AM05 1397 aa11.71□□□□□ -0.53
Ttc28-206ENSMUST00000156290 AampJ3QN89 436 aa11.71□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Cald1E9QA15 768 aaKnown RBP11.71□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Fbxo2Q80UW2 297 aa11.7□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Pkd2O35245 966 aa11.7□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Cecr2E9Q2Z1 1453 aa11.7□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Cux2P70298 1426 aa11.7□□□□□ -0.54
Ttc28-206ENSMUST00000156290 CalrP14211 416 aaKnown RBP11.7□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Ggt6Q6PDE7 497 aa11.69□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Gtf2a1Q99PM3 378 aa11.69□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Isy1Q69ZQ2 285 aaKnown RBP11.69□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Rwdd1Q9CQK7 243 aa11.68□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Ubap1lG3UW59 384 aa11.68□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Chmp5Q9D7S9 219 aa11.68□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Rundc1Q0VDN7 615 aa11.67□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Baz1bQ9Z277 1479 aa11.67□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Tnnt1O88346 262 aa11.67□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Slc4a3P16283 1227 aa11.67□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Cep162Q6ZQ06 1403 aa11.67□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Fyco1Q8VDC1 1437 aa11.66□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Cspp1B2RX88 1205 aa11.66□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Dusp9Q7TNL7 452 aa11.66□□□□□ -0.54
Ttc28-206ENSMUST00000156290 MccE9PWI3 1003 aa11.65□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Ipo8Q7TMY7 1010 aa11.65□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Mak16Q8BGS0 296 aaKnown RBP11.65□□□□□ -0.54
Ttc28-206ENSMUST00000156290 B4galnt3Q6L8S8 986 aa11.65□□□□□ -0.54
Ttc28-206ENSMUST00000156290 Rock2P70336 1388 aa11.64□□□□□ -0.55
Ttc28-206ENSMUST00000156290 PrkcshO08795 521 aa11.64□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Txndc2Q6P902 515 aa11.64□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Sycp2Q9CUU3 1500 aa11.63□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Psme1P97371 249 aa11.63□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Kif3bQ61771 747 aa11.63□□□□□ -0.55
Ttc28-206ENSMUST00000156290 U2surpQ6NV83 1029 aaKnown RBP11.63□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Lemd3Q9WU40 921 aa11.63□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Rsph3aQ3UFY4 516 aa11.62□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Podxl2Q8CAE9 603 aa11.62□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Birc3O08863 600 aa11.62□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Arhgap35Q91YM2 1499 aa11.62□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Zfp777B9EKF4 885 aa11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Fam43aQ8BUP8 424 aa11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Trim30aP15533 496 aa11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Smg6P61406 1418 aaKnown RBP11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Phf14Q9D4H9 881 aa11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Kif20aP97329 887 aa11.61□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Ankrd36D3Z4K0 1415 aa11.6□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Taok2Q6ZQ29 1240 aa11.59□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Atp6v1dP57746 247 aa11.59□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Fmn1Q05860 1466 aa11.59□□□□□ -0.55
Ttc28-206ENSMUST00000156290 HnrnpuQ8VEK3 800 aaKnown RBP11.59□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Mphosph9A6H5Y1 991 aa11.58□□□□□ -0.55
Ttc28-206ENSMUST00000156290 Gtf2e1Q9D0D5 440 aa11.58□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Ylpm1Q9R0I7 1386 aaKnown RBP11.58□□□□□ -0.56
Ttc28-206ENSMUST00000156290 NudcO35685 332 aaKnown RBP11.58□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Pde3bQ61409 1100 aa11.58□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Pibf1E9Q6K3 756 aa11.57□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Crybg2B7ZCC2 1516 aa11.57□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Kif3aP28741 701 aa11.57□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Smarce1O54941 411 aaKnown RBP11.56□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Kiaa0754Q69ZZ9 979 aa11.56□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Exoc6Q8R313 802 aa11.56□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Znf330Q922H9 316 aa11.56□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Cwc15Q9JHS9 229 aaKnown RBP11.56□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Ccdc173A0JLY1 547 aa11.55□□□□□ -0.56
Ttc28-206ENSMUST00000156290 PnnO35691 725 aaKnown RBP11.55□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Taf3Q5HZG4 932 aa11.55□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Sart1Q9Z315 806 aaKnown RBP11.54□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Speer4f1Q9D5Q6 258 aa11.54□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Ttc28-206ENSMUST00000156290 CftrP26361 1476 aa11.54□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Rapgef2Q8CHG7 1496 aa11.53□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Dcaf11Q91VU6 549 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms