RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 Grwd1Q810D6 446 aaKnown RBP13.44□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Htatsf1Q8BGC0 757 aa13.43□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Mtus2Q3UHD3 1353 aa13.43□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Apbb1Q9QXJ1 710 aa13.43□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Mroh3A0A1D5RM54 893 aa13.42□□□□□ -0.26
Col4a3-201ENSMUST00000113457 CntlnA2AM05 1397 aa13.42□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Calcoco2A2A6M5 331 aa13.42□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Arhgap35Q91YM2 1499 aa13.4□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Pcmtd1P59913 357 aa13.4□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Neurod2Q62414 383 aa13.4□□□□□ -0.26
Col4a3-201ENSMUST00000113457 SetQ9EQU5 289 aaKnown RBP13.4□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Paf1Q8K2T8 535 aa13.4□□□□□ -0.27
Col4a3-201ENSMUST00000113457 UacaQ8CGB3 1411 aa13.39□□□□□ -0.27
Col4a3-201ENSMUST00000113457 HdgfP51859 237 aaKnown RBP13.39□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Ppp1r18Q8BQ30 594 aa13.39□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Cep162Q6ZQ06 1403 aa13.39□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Rtf1A2AQ19 715 aaKnown RBP13.39□□□□□ -0.27
Col4a3-201ENSMUST00000113457 NudcO35685 332 aaKnown RBP13.38□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Tomm22Q9CPQ3 142 aa13.37□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Tnnt2P50752 301 aa13.37□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Stk24Q99KH8 431 aa13.37□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Top2bQ64511 1612 aa13.37□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Rock2P70336 1388 aa13.36□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Irx3P81067 507 aa13.36□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Cc2d2aQ8CFW7 1633 aa13.36□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Mbd3Q9Z2D8 285 aaKnown RBP13.36□□□□□ -0.27
Col4a3-201ENSMUST00000113457 MlecQ6ZQI3 291 aaKnown RBP13.36□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Armcx1Q9CX83 456 aa13.34□□□□□ -0.27
Col4a3-201ENSMUST00000113457 Stard8Q8K031 1019 aa13.33□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Ciz1Q8VEH2 845 aa13.33□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Carmil1Q6EDY6 1374 aa13.32□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Ncoa2Q61026 1462 aa13.32□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Top2aQ01320 1528 aaKnown RBP13.32□□□□□ -0.28
Col4a3-201ENSMUST00000113457 1700123L14RikQ3V2K7 440 aa13.31□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Iffo2Q8R2V2 512 aa13.31□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Ftsj3Q9DBE9 838 aaKnown RBP13.31□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Pde3bQ61409 1100 aa13.29□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Kri1Q8VDQ9 704 aaKnown RBP13.29□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Plin1Q8CGN5 517 aa13.29□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Ofd1Q80Z25 1017 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 KnstrnQ9D9Z1 312 aaKnown RBP13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Ankrd36D3Z4K0 1415 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 NrkQ9R0G8 1455 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Rapgef2Q8CHG7 1496 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Fam71e1A1L3C1 212 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 WrnO09053 1401 aa13.28□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Mical1Q8VDP3 1048 aa13.27□□□□□ -0.28
Col4a3-201ENSMUST00000113457 MecomP14404 1042 aa13.27□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Chrna2Q91X60 512 aa13.27□□□□□ -0.28
Col4a3-201ENSMUST00000113457 Arhgap27A2AB59 869 aa13.27□□□□□ -0.29
Col4a3-201ENSMUST00000113457 U2surpQ6NV83 1029 aaKnown RBP13.27□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Erich6bQ9D4S6 220 aa13.27□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Sall2Q9QX96 1004 aa13.27□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Sart3Q9JLI8 962 aaKnown RBP13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Fhad1A6PWD2 1420 aa13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Spryd3E9Q9B3 442 aa13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Cnga1P29974 684 aa13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Ncbp3Q8BZR9 615 aaKnown RBP13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Plekhh2Q8C115 1491 aa13.26□□□□□ -0.29
Col4a3-201ENSMUST00000113457 AU015836B2RUM3 263 aa13.25□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Chmp3Q9CQ10 224 aa13.25□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Efcab5A0JP43 1406 aa13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Cald1E9QA15 768 aaKnown RBP13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Card11Q8CIS0 1159 aa13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 HnrnpuQ8VEK3 800 aaKnown RBP13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Rrp7aQ9D1C9 280 aaKnown RBP13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Odf2A3KGV1 830 aaKnown RBP13.24□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Kif21aQ9QXL2 1672 aa13.23□□□□□ -0.29
Col4a3-201ENSMUST00000113457 CgnP59242 1191 aa13.23□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Tnnt1O88346 262 aa13.23□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Tpm4Q6IRU2 248 aa13.23□□□□□ -0.29
Col4a3-201ENSMUST00000113457 R3hcc1Q8BSI6 488 aa13.22□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Kif27Q7M6Z4 1394 aa13.21□□□□□ -0.29
Col4a3-201ENSMUST00000113457 Ppm1gQ61074 542 aa13.21□□□□□ -0.29
Col4a3-201ENSMUST00000113457 AampJ3QN89 436 aa13.21□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Tpd52l1O54818 204 aa13.21□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Dbr1Q923B1 550 aa13.21□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Tpm3P21107 285 aaKnown RBP13.21□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Q3TQI7 289 aaKnown RBP13.2□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Sox12Q04890 314 aa13.2□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Psme1P97371 249 aa13.2□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Ccdc47Q9D024 483 aaKnown RBP13.19□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Arid4aF8VPQ2 1261 aaKnown RBP13.18□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Shroom4Q1W617 1475 aa13.17□□□□□ -0.3
Col4a3-201ENSMUST00000113457 PtmsQ9D0J8 101 aaKnown RBP13.17□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Ccar1Q8CH18 1146 aaKnown RBP13.16□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Spag9Q58A65 1321 aaKnown RBP13.16□□□□□ -0.3
Col4a3-201ENSMUST00000113457 CrebrfQ8CDG5 640 aaKnown RBP13.16□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Tpm2P58774 284 aa13.16□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Krt82Q99M74 516 aa13.16□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Ccnb3Q810T2 1396 aa13.15□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Pbrm1Q8BSQ9 1634 aaKnown RBP13.15□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Ccdc43Q9CR29 222 aaKnown RBP13.15□□□□□ -0.3
Col4a3-201ENSMUST00000113457 Cux2P70298 1426 aa13.15□□□□□ -0.31
Col4a3-201ENSMUST00000113457 MsnP26041 577 aaKnown RBP13.14□□□□□ -0.31
Col4a3-201ENSMUST00000113457 Pak3Q61036 559 aa13.14□□□□□ -0.31
Col4a3-201ENSMUST00000113457 Stk26Q99JT2 416 aa13.14□□□□□ -0.31
Col4a3-201ENSMUST00000113457 LrpprcQ6PB66 1392 aaKnown RBP13.14□□□□□ -0.31
Col4a3-201ENSMUST00000113457 Ripply1Q2WG77 201 aa13.14□□□□□ -0.31
Col4a3-201ENSMUST00000113457 Ecm2Q5FW85 670 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms