RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 MccE9PWI3 1003 aa19.38■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Kif3bQ61771 747 aa19.37■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Casc1Q6TDU8 730 aa19.36■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Pak3Q61036 559 aa19.35■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Aebp2Q9Z248 504 aaKnown RBP19.35■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Pkd2O35245 966 aa19.35■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Aebp1Q640N1 1128 aa19.35■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 HnrnpuQ8VEK3 800 aaKnown RBP19.35■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Sart3Q9JLI8 962 aaKnown RBP19.34■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Kdm5dQ62240 1548 aa19.33■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Trak1Q6PD31 939 aa19.33■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 U2af1Q9D883 239 aaKnown RBP19.33■□□□□ 0.69
Ccdc50-203ENSMUST00000100026 Hspa5P20029 655 aaKnown RBP19.33■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Ciz1Q8VEH2 845 aa19.32■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Senp3Q9EP97 568 aaKnown RBP19.32■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 B4galnt3Q6L8S8 986 aa19.32■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 KnstrnQ9D9Z1 312 aaKnown RBP19.32■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Tmf1B9EKI3 1091 aa19.31■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Speer4f1Q9D5Q6 258 aa19.3■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Tmco5bQ80X59 307 aa19.3■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Spag9Q58A65 1321 aaKnown RBP19.3■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Ap3b2Q9JME5 1082 aa19.29■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Dnai2A2AC93 623 aa19.29■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Htatsf1Q8BGC0 757 aa19.29■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Chmp3Q9CQ10 224 aa19.29■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Bcl11bQ99PV8 884 aa19.28■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Rwdd1Q9CQK7 243 aa19.27■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Rsph4aQ8BYM7 716 aa19.27■□□□□ 0.68
Ccdc50-203ENSMUST00000100026 Dcaf11Q91VU6 549 aa19.27■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Wwc2Q6NXJ0 1187 aa19.26■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Cabp1Q9JLK7 227 aa19.25■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Chrna2Q91X60 512 aa19.23■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Baz1bQ9Z277 1479 aa19.23■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Pibf1E9Q6K3 756 aa19.23■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 MecomP14404 1042 aa19.22■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Ppm1gQ61074 542 aa19.22■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Pabpn1Q8CCS6 302 aaKnown RBP19.21■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Cux2P70298 1426 aa19.21■□□□□ 0.67
Ccdc50-203ENSMUST00000100026 Znf330Q922H9 316 aa19.2■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Iffo2Q8R2V2 512 aa19.19■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Pde3bQ61409 1100 aa19.19■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Utp14aQ640M1 767 aaKnown RBP19.19■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Spryd3E9Q9B3 442 aa19.18■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Dhx57Q6P5D3 1388 aaKnown RBP19.18■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Rock2P70336 1388 aa19.18■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Nup155Q99P88 1391 aaKnown RBP19.17■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Pcmtd1P59913 357 aa19.16■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Golga2Q921M4 999 aa19.16■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Mphosph9A6H5Y1 991 aa19.15■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Isy1Q69ZQ2 285 aaKnown RBP19.15■□□□□ 0.66
Ccdc50-203ENSMUST00000100026 Fyco1Q8VDC1 1437 aa19.14■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Fan1Q69ZT1 1020 aa19.13■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 CenpjQ569L8 1344 aa19.13■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Cabp4Q8VHC5 271 aa19.13■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Mbd3Q9Z2D8 285 aaKnown RBP19.12■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Pip4k2bQ80XI4 416 aa19.12■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Srcin1Q9QWI6 1250 aa19.12■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Brpf1B2RRD7 1212 aa19.11■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Sart1Q9Z315 806 aaKnown RBP19.11■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Vps53Q8CCB4 832 aa19.11■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Tomm22Q9CPQ3 142 aa19.11■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Fmn1Q05860 1466 aa19.11■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Cluap1Q8R3P7 413 aa19.09■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 CgnP59242 1191 aa19.08■□□□□ 0.65
Ccdc50-203ENSMUST00000100026 Tpm3-rs7D3Z2H9 248 aa19.08■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Plekhh2Q8C115 1491 aa19.05■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Slc4a3P16283 1227 aa19.05■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Arhgap35Q91YM2 1499 aa19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Sin3aQ60520 1274 aaKnown RBP19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Gm973E9Q295 1059 aa19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Shq1Q7TMX5 569 aa19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Phldb1Q6PDH0 1371 aaKnown RBP19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Adam1bQ8R534 806 aa19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Exoc6Q8R313 802 aa19.04■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Ccdc9Q8VC31 543 aaKnown RBP19.03■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Cep162Q6ZQ06 1403 aa19.03■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Zscan21Q07231 555 aa19.02■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Ksr2Q3UVC0 959 aa19.02■□□□□ 0.64
Ccdc50-203ENSMUST00000100026 Slc4a10Q5DTL9 1118 aa19.02■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Stk31Q99MW1 1018 aa19.01■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 CntlnA2AM05 1397 aa19.01■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Slc4a1apE9PX68 744 aa19■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 AppP12023 770 aa18.98■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 CrebrfQ8CDG5 640 aaKnown RBP18.98■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 CrbnQ8C7D2 445 aa18.98■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 R3hcc1Q8BSI6 488 aa18.97■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Mical1Q8VDP3 1048 aa18.97■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Fyb1O35601 819 aa18.97■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Shroom4Q1W617 1475 aa18.96■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Mak16Q8BGS0 296 aaKnown RBP18.96■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Ccar1Q8CH18 1146 aaKnown RBP18.96■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Noc3lQ8VI84 807 aaKnown RBP18.96■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Chmp5Q9D7S9 219 aa18.96■□□□□ 0.63
Ccdc50-203ENSMUST00000100026 Fam71e1A1L3C1 212 aa18.95■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Gm21190A0A0G2JGJ6 266 aa18.95■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Stard8Q8K031 1019 aa18.95■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Tsen2Q6P7W5 460 aa18.94■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Chmp7Q8R1T1 451 aa18.94■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Mink1Q9JM52 1308 aa18.94■□□□□ 0.62
Ccdc50-203ENSMUST00000100026 Mfap1aC0HKD8 439 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms