RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 ScribQ80U72 1612 aa9.2□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Igf1rQ60751 1373 aa9.2□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Nsd2Q8BVE8 1365 aa9.19□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Nup155Q99P88 1391 aaKnown RBP9.19□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Ccdc88bQ4QRL3 1481 aa9.19□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Shroom4Q1W617 1475 aa9.19□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Arhgap35Q91YM2 1499 aa9.18□□□□□ -0.94
Scn1a-202ENSMUST00000094951 UacaQ8CGB3 1411 aa9.18□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Spag9Q58A65 1321 aaKnown RBP9.18□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Gm14025A2AP89 1413 aa9.17□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Arhgap31A6X8Z5 1425 aa9.17□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Q8BT18 775 aa9.17□□□□□ -0.94
Scn1a-202ENSMUST00000094951 GphnQ8BUV3 769 aaKnown RBP9.16□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Irx6Q9ER75 438 aa9.15□□□□□ -0.95
Scn1a-202ENSMUST00000094951 ZgpatQ8VDM1 511 aa9.14□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Utp14aQ640M1 767 aaKnown RBP9.14□□□□□ -0.95
Scn1a-202ENSMUST00000094951 HnrnpuQ8VEK3 800 aaKnown RBP9.14□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Sirt1Q923E4 737 aa9.14□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Stk26Q99JT2 416 aa9.13□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Sart3Q9JLI8 962 aaKnown RBP9.13□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Synj1Q8CHC4 1574 aa9.13□□□□□ -0.95
Scn1a-202ENSMUST00000094951 DaxxO35613 739 aa9.13□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Pak3Q61036 559 aa9.12□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Rock2P70336 1388 aa9.11□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Tmf1B9EKI3 1091 aa9.11□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Mrs2Q5NCE8 434 aa9.11□□□□□ -0.95
Scn1a-202ENSMUST00000094951 CatipB9EKE5 520 aa9.11□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Pkd2O35245 966 aa9.11□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Fyb1O35601 819 aa9.1□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Anks4bQ8K3X6 423 aa9.1□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Sox12Q04890 314 aa9.1□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Ciz1Q8VEH2 845 aa9.1□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Ifit1bl1D3Z6F0 470 aa9.1□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Cabp1Q9JLK7 227 aa9.09□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Cux1P53564 1515 aa9.09□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Zeb2Q9R0G7 1215 aa9.09□□□□□ -0.95
Scn1a-202ENSMUST00000094951 ErbinQ80TH2 1402 aa9.09□□□□□ -0.95
Scn1a-202ENSMUST00000094951 Trak1Q6PD31 939 aa9.08□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Rad21Q61550 635 aaKnown RBP9.08□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Rtn4Q99P72 1162 aaKnown RBP9.08□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Pip4k2bQ80XI4 416 aa9.08□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Ddx11Q6AXC6 880 aa9.07□□□□□ -0.96
Scn1a-202ENSMUST00000094951 PogzQ8BZH4 1409 aaKnown RBP9.07□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Smc4Q8CG47 1286 aa9.07□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Pes1Q9EQ61 584 aaKnown RBP9.07□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Srcin1Q9QWI6 1250 aa9.07□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Duox2A2AQ99 1517 aa9.06□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Map7O88735 730 aa9.06□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Gsdma3Q5Y4Y6 464 aa9.06□□□□□ -0.96
Scn1a-202ENSMUST00000094951 FanciQ8K368 1330 aa9.06□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Q3TQI7 289 aaKnown RBP9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Sall2Q9QX96 1004 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 PtprkP35822 1457 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Calr4Q3TQS0 420 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 NrkQ9R0G8 1455 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Plekhd1B2RPU2 505 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Gimap6Q8K349 305 aa9.05□□□□□ -0.96
Scn1a-202ENSMUST00000094951 PnnO35691 725 aaKnown RBP9.04□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Gnl3lQ6PGG6 577 aaKnown RBP9.04□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Shq1Q7TMX5 569 aa9.04□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Chmp7Q8R1T1 451 aa9.04□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Rangap1P46061 589 aaKnown RBP9.04□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Ccdc141E9Q8Q6 1531 aa9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Top2aQ01320 1528 aaKnown RBP9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Mapk8ip2Q9ERE9 830 aa9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Fam163aQ8CAA5 168 aa9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Mphosph9A6H5Y1 991 aa9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Mbd3Q9Z2D8 285 aaKnown RBP9.03□□□□□ -0.96
Scn1a-202ENSMUST00000094951 Birc3O08863 600 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Cabp4Q8VHC5 271 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Frmpd1A2AKB4 1549 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Arhgap5P97393 1501 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Ecm2Q5FW85 670 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Zpr1Q62384 459 aa9.02□□□□□ -0.97
Scn1a-202ENSMUST00000094951 MccE9PWI3 1003 aa9.01□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Cnga1P29974 684 aa9.01□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Stk31Q99MW1 1018 aa9.01□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Trim26Q99PN3 545 aa9□□□□□ -0.97
Scn1a-202ENSMUST00000094951 PnisrA2AJT4 805 aaKnown RBP9□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Slc5a4bQ91ZP4 660 aa9□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Kcnn1Q9EQR3 537 aa9□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Rundc1Q0VDN7 615 aa8.99□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Cc2d2aQ8CFW7 1633 aa8.99□□□□□ -0.97
Scn1a-202ENSMUST00000094951 1700019A02RikA0A087WPV9 146 aa8.99□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Plb1Q3TTY0 1478 aa8.99□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Tdrd9Q14BI7 1383 aa8.99□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Wdr62Q3U3T8 1523 aa8.98□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Rock1P70335 1354 aa8.98□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Ccdc9Q8VC31 543 aaKnown RBP8.98□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Wdr43Q6ZQL4 677 aaKnown RBP8.98□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Dmrt2Q8BG36 561 aa8.98□□□□□ -0.97
Scn1a-202ENSMUST00000094951 KnstrnQ9D9Z1 312 aaKnown RBP8.97□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Zmym3Q9JLM4 1370 aa8.97□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Ythdc1E9Q5K9 736 aaKnown RBP8.97□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Ppp4r2Q0VGB7 417 aa8.97□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Crocc2F6XLV1 1638 aa8.97□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Fan1Q69ZT1 1020 aa8.96□□□□□ -0.97
Scn1a-202ENSMUST00000094951 U2af1Q9D883 239 aaKnown RBP8.96□□□□□ -0.97
Scn1a-202ENSMUST00000094951 Gm7298A0A0N4SVU1 1476 aa8.96□□□□□ -0.97
Scn1a-202ENSMUST00000094951 UvssaQ9D479 717 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms