RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Mtus2Q3UHD3 1353 aa14.75□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Wdr7Q920I9 1489 aa14.75□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Dnajc5P60904 198 aa14.75□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 NclP09405 707 aaKnown RBP14.74□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Lmtk2Q3TYD6 1471 aa14.73□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Arhgap5P97393 1501 aa14.73□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Sart1Q9Z315 806 aaKnown RBP14.72□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Kiaa1551Q5DTW7 1521 aa14.72□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Arhgef40Q3UPH7 1517 aa14.72□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Mapkbp1Q6NS57 1503 aa14.72□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 A2mQ6GQT1 1474 aa14.72□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Eid3Q3V124 375 aa14.71□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Ncapd3Q6ZQK0 1506 aa14.71□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Lrrc9Q8CDN9 1456 aa14.71□□□□□ -0.05
Ccdc38-201ENSMUST00000092215 Gcc2Q8CHG3 1679 aa14.7□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Cdc42bpaQ3UU96 1719 aa14.7□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Rrp7aQ9D1C9 280 aaKnown RBP14.7□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Plekhh2Q8C115 1491 aa14.69□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 NhsB1AV60 1647 aa14.69□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Adcy10Q8C0T9 1614 aa14.68□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Abcc5Q9R1X5 1436 aa14.66□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Lemd3Q9WU40 921 aa14.66□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Trappc8E9PWG2 1437 aa14.66□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Cul7Q8VE73 1689 aa14.66□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Mlh3A0A1Y7VMP7 1443 aa14.65□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Ak9G3UYQ4 1894 aa14.65□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Hnrnpul2Q00PI9 745 aaKnown RBP14.65□□□□□ -0.06
Ccdc38-201ENSMUST00000092215 Kdm6bQ5NCY0 1641 aa14.62□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Mia2Q91ZV0 1396 aa14.62□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Naip2Q9QUK4 1447 aa14.6□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Caskin1Q6P9K8 1431 aa14.59□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Map3k5O35099 1380 aa14.59□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Zfp644E9QA22 1323 aa14.59□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 NefmP08553 848 aa14.59□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Abca8bQ8K440 1620 aa14.59□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Depdc5P61460 1591 aa14.58□□□□□ -0.07
Ccdc38-201ENSMUST00000092215 Fam208aQ69ZR9 1610 aaKnown RBP14.58□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Setbp1Q9Z180 1582 aa14.58□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 UacaQ8CGB3 1411 aa14.57□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Pprc1Q6NZN1 1644 aa14.56□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Kiaa1210E9Q0C6 1637 aa14.53□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Rpgrip1Q9EPQ2 1331 aa14.53□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Fhad1A6PWD2 1420 aa14.52□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Zfyve16Q80U44 1528 aa14.52□□□□□ -0.08
Ccdc38-201ENSMUST00000092215 Pcdh10E9PXQ7 1057 aa14.52□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Il16O54824 1322 aa14.52□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Adgrb2Q8CGM1 1561 aa14.51□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Rnf17Q99MV7 1640 aa14.5□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Kif3bQ61771 747 aa14.5□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Vps8Q0P5W1 1427 aa14.49□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Ccer2J3QPU5 274 aa14.48□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Map4P27546 1125 aaKnown RBP14.48□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Spag9Q58A65 1321 aaKnown RBP14.47□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Mphosph9A6H5Y1 991 aa14.47□□□□□ -0.09
Ccdc38-201ENSMUST00000092215 Clasp1Q80TV8 1535 aaKnown RBP14.46□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Cfap74Q3UY96 1578 aa14.46□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 OvosQ3UU35 1456 aa14.46□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Trak1Q6PD31 939 aa14.45□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Nup155Q99P88 1391 aaKnown RBP14.45□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Gm32742A0A1B0GT42 1604 aa14.44□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Prdm16A2A935 1275 aa14.44□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Erich6D3Z6S9 713 aa14.44□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Kdm3bQ6ZPY7 1562 aa14.43□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Neurod1Q60867 357 aa14.43□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 SphkapQ6NSW3 1687 aa14.43□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Clstn2Q9ER65 966 aa14.43□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Ptch1Q61115 1434 aa14.43□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 TonslQ6NZL6 1363 aa14.42□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Abca9Q8K449 1623 aa14.41□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Rfx7F8VPJ6 1459 aa14.41□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Las1lA2BE28 776 aaKnown RBP14.41□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Hspa5P20029 655 aaKnown RBP14.41□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Abcc3B2RX12 1523 aa14.4□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Ttll5Q8CHB8 1328 aa14.4□□□□□ -0.1
Ccdc38-201ENSMUST00000092215 Pkd2O35245 966 aa14.39□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Kidins220E9Q9B7 1793 aa14.39□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Dnajc5gQ8C632 165 aa14.39□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Ttc37F8VPK0 1563 aa14.39□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Ssh2Q5SW75 1423 aa14.38□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Pde4cQ3UEI1 686 aa14.37□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Fndc1E9Q043 1732 aa14.37□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Dennd4bQ3U1Y4 1499 aa14.36□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 AglF8VPN4 1532 aa14.36□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Cdc42bpbQ7TT50 1713 aa14.35□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Safb2Q80YR5 991 aaKnown RBP14.35□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Fmn2Q9JL04 1578 aa14.34□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Gm13697A2AK42 830 aa14.34□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Yeats2Q3TUF7 1407 aa14.34□□□□□ -0.11
Ccdc38-201ENSMUST00000092215 Pdcd11Q6NS46 1862 aaKnown RBP14.33□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Adgrl2Q8JZZ7 1487 aa14.32□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 AlkP97793 1621 aa14.32□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Afap1Q80YS6 731 aa14.31□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Rgl3Q3UYI5 709 aa14.3□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Dhx9O70133 1380 aaKnown RBP14.29□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 MlecQ6ZQI3 291 aaKnown RBP14.29□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Synj2Q9D2G5 1434 aa14.29□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 Wdr66E9Q743 1299 aa14.27□□□□□ -0.12
Ccdc38-201ENSMUST00000092215 AdgbG3UZ78 1657 aa14.27□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Stk24Q99KH8 431 aa14.27□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Cd109Q8R422 1442 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms