RNA–Protein interactions for RNA: ENSMUST00000032471.8

Rho-201, Transcript of Rhodopsin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rho, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rho-201ENSMUST00000032471 Chmp4bQ9D8B3 224 aaKnown RBP12.71□□□□□ -0.38
Rho-201ENSMUST00000032471 Pak3Q61036 559 aa12.71□□□□□ -0.38
Rho-201ENSMUST00000032471 Cep162Q6ZQ06 1403 aa12.7□□□□□ -0.38
Rho-201ENSMUST00000032471 Fyco1Q8VDC1 1437 aa12.7□□□□□ -0.38
Rho-201ENSMUST00000032471 Ubap1lG3UW59 384 aa12.7□□□□□ -0.38
Rho-201ENSMUST00000032471 Plin1Q8CGN5 517 aa12.69□□□□□ -0.38
Rho-201ENSMUST00000032471 Ciz1Q8VEH2 845 aa12.69□□□□□ -0.38
Rho-201ENSMUST00000032471 WrnO09053 1401 aa12.69□□□□□ -0.38
Rho-201ENSMUST00000032471 Fbln2P37889 1221 aa12.67□□□□□ -0.38
Rho-201ENSMUST00000032471 Nol10Q5RJG1 687 aaKnown RBP12.67□□□□□ -0.38
Rho-201ENSMUST00000032471 Nup155Q99P88 1391 aaKnown RBP12.66□□□□□ -0.38
Rho-201ENSMUST00000032471 Fhad1A6PWD2 1420 aa12.65□□□□□ -0.38
Rho-201ENSMUST00000032471 Ccdc88bQ4QRL3 1481 aa12.65□□□□□ -0.38
Rho-201ENSMUST00000032471 Clstn1Q9EPL2 979 aa12.65□□□□□ -0.38
Rho-201ENSMUST00000032471 Ofd1Q80Z25 1017 aa12.65□□□□□ -0.39
Rho-201ENSMUST00000032471 Rundc1Q0VDN7 615 aa12.64□□□□□ -0.39
Rho-201ENSMUST00000032471 Srcin1Q9QWI6 1250 aa12.64□□□□□ -0.39
Rho-201ENSMUST00000032471 PrkcshO08795 521 aa12.63□□□□□ -0.39
Rho-201ENSMUST00000032471 Smarca4Q3TKT4 1613 aaKnown RBP12.63□□□□□ -0.39
Rho-201ENSMUST00000032471 Hspa5P20029 655 aaKnown RBP12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Stard8Q8K031 1019 aa12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Ccnb3Q810T2 1396 aa12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Shroom4Q1W617 1475 aa12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Q3TQI7 289 aaKnown RBP12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Fan1Q69ZT1 1020 aa12.62□□□□□ -0.39
Rho-201ENSMUST00000032471 Mphosph9A6H5Y1 991 aa12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Atf3Q60765 181 aa12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Pes1Q9EQ61 584 aaKnown RBP12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Calr4Q3TQS0 420 aa12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 U2surpQ6NV83 1029 aaKnown RBP12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Cabp4Q8VHC5 271 aa12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Spag9Q58A65 1321 aaKnown RBP12.61□□□□□ -0.39
Rho-201ENSMUST00000032471 Shq1Q7TMX5 569 aa12.6□□□□□ -0.39
Rho-201ENSMUST00000032471 U2af1Q9D883 239 aaKnown RBP12.6□□□□□ -0.39
Rho-201ENSMUST00000032471 Apbb1Q9QXJ1 710 aa12.6□□□□□ -0.39
Rho-201ENSMUST00000032471 Vsig10D3YX43 558 aa12.59□□□□□ -0.39
Rho-201ENSMUST00000032471 Tmf1B9EKI3 1091 aa12.59□□□□□ -0.39
Rho-201ENSMUST00000032471 CenpjQ569L8 1344 aa12.59□□□□□ -0.39
Rho-201ENSMUST00000032471 Plekhh2Q8C115 1491 aa12.59□□□□□ -0.39
Rho-201ENSMUST00000032471 Urb2E9Q7L1 1524 aaKnown RBP12.59□□□□□ -0.39
Rho-201ENSMUST00000032471 Fgd6Q69ZL1 1399 aa12.58□□□□□ -0.4
Rho-201ENSMUST00000032471 Irx3P81067 507 aa12.57□□□□□ -0.4
Rho-201ENSMUST00000032471 Dcaf11Q91VU6 549 aa12.57□□□□□ -0.4
Rho-201ENSMUST00000032471 Ccdc27Q3V036 639 aa12.56□□□□□ -0.4
Rho-201ENSMUST00000032471 Sirt1Q923E4 737 aa12.56□□□□□ -0.4
Rho-201ENSMUST00000032471 Tnnt1O88346 262 aa12.56□□□□□ -0.4
Rho-201ENSMUST00000032471 Fyb1O35601 819 aa12.55□□□□□ -0.4
Rho-201ENSMUST00000032471 Ppp4r2Q0VGB7 417 aa12.55□□□□□ -0.4
Rho-201ENSMUST00000032471 Trim30dE9PWL0 497 aa12.54□□□□□ -0.4
Rho-201ENSMUST00000032471 Sart3Q9JLI8 962 aaKnown RBP12.54□□□□□ -0.4
Rho-201ENSMUST00000032471 Tdrd9Q14BI7 1383 aa12.53□□□□□ -0.4
Rho-201ENSMUST00000032471 Chrna2Q91X60 512 aa12.52□□□□□ -0.4
Rho-201ENSMUST00000032471 Wdr43Q6ZQL4 677 aaKnown RBP12.52□□□□□ -0.41
Rho-201ENSMUST00000032471 Dnai2A2AC93 623 aa12.52□□□□□ -0.41
Rho-201ENSMUST00000032471 Ncoa2Q61026 1462 aa12.51□□□□□ -0.41
Rho-201ENSMUST00000032471 Sf3b2Q3UJB0 878 aaKnown RBP12.51□□□□□ -0.41
Rho-201ENSMUST00000032471 Rock2P70336 1388 aa12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 Mrc2Q64449 1479 aa12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 Hsp90b1P08113 802 aaKnown RBP12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 HnrnpuQ8VEK3 800 aaKnown RBP12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 Efcab5A0JP43 1406 aa12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 Sh3bp5Q9Z131 463 aa12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 Iqgap2Q3UQ44 1575 aa12.5□□□□□ -0.41
Rho-201ENSMUST00000032471 PnnO35691 725 aaKnown RBP12.49□□□□□ -0.41
Rho-201ENSMUST00000032471 Arhgap35Q91YM2 1499 aa12.49□□□□□ -0.41
Rho-201ENSMUST00000032471 Gm21190A0A0G2JGJ6 266 aa12.49□□□□□ -0.41
Rho-201ENSMUST00000032471 Pde3bQ61409 1100 aa12.48□□□□□ -0.41
Rho-201ENSMUST00000032471 Pknox2Q8BG99 474 aa12.48□□□□□ -0.41
Rho-201ENSMUST00000032471 Cc2d2bA0A286YDU8 1405 aa12.48□□□□□ -0.41
Rho-201ENSMUST00000032471 Chmp3Q9CQ10 224 aa12.48□□□□□ -0.41
Rho-201ENSMUST00000032471 Tmco5bQ80X59 307 aa12.47□□□□□ -0.41
Rho-201ENSMUST00000032471 Mink1Q9JM52 1308 aa12.47□□□□□ -0.41
Rho-201ENSMUST00000032471 CadpsQ80TJ1 1355 aa12.47□□□□□ -0.41
Rho-201ENSMUST00000032471 DekQ7TNV0 380 aaKnown RBP12.46□□□□□ -0.41
Rho-201ENSMUST00000032471 Prdm16A2A935 1275 aa12.46□□□□□ -0.41
Rho-201ENSMUST00000032471 Chmp7Q8R1T1 451 aa12.46□□□□□ -0.42
Rho-201ENSMUST00000032471 Stk31Q99MW1 1018 aa12.46□□□□□ -0.42
Rho-201ENSMUST00000032471 Evi5lH3BKQ3 813 aa12.45□□□□□ -0.42
Rho-201ENSMUST00000032471 Rassf8Q8CJ96 419 aa12.45□□□□□ -0.42
Rho-201ENSMUST00000032471 Map7O88735 730 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Speer4f1Q9D5Q6 258 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Synj1Q8CHC4 1574 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Slc4a1apE9PX68 744 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Hsp90ab1P11499 724 aaKnown RBP12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Wwc2Q6NXJ0 1187 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Dmrt2Q8BG36 561 aa12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 Ddx54Q8K4L0 874 aaKnown RBP12.44□□□□□ -0.42
Rho-201ENSMUST00000032471 SafbD3YXK2 937 aaKnown RBP12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 Usp40Q8BWR4 1235 aa12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 Golga2Q921M4 999 aa12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 Afap1Q80YS6 731 aa12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 Aebp2Q9Z248 504 aaKnown RBP12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 Pibf1E9Q6K3 756 aa12.43□□□□□ -0.42
Rho-201ENSMUST00000032471 ScribQ80U72 1612 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 ErbinQ80TH2 1402 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 UacaQ8CGB3 1411 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 Smarca2Q6DIC0 1577 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 Gm14025A2AP89 1413 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 Nsd2Q8BVE8 1365 aa12.42□□□□□ -0.42
Rho-201ENSMUST00000032471 Rab11fip3Q8CHD8 1047 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 99.2 ms