RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Cluap1Q8R3P7 413 aa15.37■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Tomm22Q9CPQ3 142 aa15.36■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Mre11Q61216 706 aa15.36■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 GorabQ8BRM2 368 aa15.36■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 1700019A02RikA0A087WPV9 146 aa15.36■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Ipo4Q8VI75 1082 aa15.36■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Sart3Q9JLI8 962 aaKnown RBP15.35■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Setd5Q5XJV7 1441 aa15.35■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 NudcO35685 332 aaKnown RBP15.34■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Hspa5P20029 655 aaKnown RBP15.34■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Anapc15P60007 132 aa15.34■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Speer4f1Q9D5Q6 258 aa15.34■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Clstn1Q9EPL2 979 aa15.34■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Cspp1B2RX88 1205 aa15.33■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Sin3aQ60520 1274 aaKnown RBP15.33■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Sh3bp5Q9Z131 463 aa15.33■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Rrp9Q91WM3 475 aaKnown RBP15.32■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 BccipQ9CWI3 316 aa15.31■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 CrebrfQ8CDG5 640 aaKnown RBP15.31■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 HnrnpuQ8VEK3 800 aaKnown RBP15.3■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Taf3Q5HZG4 932 aa15.29■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Znf771Q8BJ90 317 aa15.28■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Ftsj3Q9DBE9 838 aaKnown RBP15.28■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Rsph3aQ3UFY4 516 aa15.27■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Brd4Q9ESU6 1400 aaKnown RBP15.27■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Iffo2Q8R2V2 512 aa15.27■□□□□ 0.04
Pcdhac1-201ENSMUST00000007584 Zscan21Q07231 555 aa15.26■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Fam13bQ8K2H3 851 aa15.26■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Rassf8Q8CJ96 419 aa15.26■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 TimelessQ9R1X4 1197 aa15.25■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Exosc9Q9JHI7 438 aaKnown RBP15.24■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Mroh3A0A1D5RM54 893 aa15.24■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Fam43aQ8BUP8 424 aa15.24■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Rbm10Q99KG3 930 aaKnown RBP15.23■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Sf3a1Q8K4Z5 791 aaKnown RBP15.23■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Ubap1lG3UW59 384 aa15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Tpm2P58774 284 aa15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Gm20521D3Z5F7 333 aa15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Pnmal2G3X9N3 661 aa15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Srpk2O54781 681 aaKnown RBP15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 IqubQ8CDK3 788 aa15.22■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Tmco5bQ80X59 307 aa15.21■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Gtf2a1Q99PM3 378 aa15.21■□□□□ 0.03
Pcdhac1-201ENSMUST00000007584 Tpm3-rs7D3Z2H9 248 aa15.21■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Tpm3P21107 285 aaKnown RBP15.21■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Eif2s2Q99L45 331 aaKnown RBP15.21■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Znf692Q3U381 531 aa15.2■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 R3hcc1Q8BSI6 488 aa15.2■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Znf330Q922H9 316 aa15.2■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Ralbp1Q62172 648 aa15.18■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Mical1Q8VDP3 1048 aa15.18■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Arid4aF8VPQ2 1261 aaKnown RBP15.18■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Drc7Q6V3W6 876 aa15.18■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Q8BT18 775 aa15.18■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Rfx1P48377 963 aa15.17■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Cnga1P29974 684 aa15.17■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Utp3Q9JI13 469 aaKnown RBP15.17■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Anp32eP97822 260 aaKnown RBP15.16■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Tpd52l1O54818 204 aa15.16■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Stard8Q8K031 1019 aa15.16■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Iqcf3Q9D498 203 aa15.16■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Mrvi1Q9WUX5 899 aaKnown RBP15.16■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Atp6v1dP57746 247 aa15.15■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Ccdc34Q3UI66 367 aa15.15■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 Smarce1O54941 411 aaKnown RBP15.15■□□□□ 0.02
Pcdhac1-201ENSMUST00000007584 CrbnQ8C7D2 445 aa15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Fhad1A6PWD2 1420 aa15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 CalrP14211 416 aaKnown RBP15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Plppr3Q7TPB0 716 aa15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 CntlnA2AM05 1397 aa15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Dusp9Q7TNL7 452 aa15.14■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Ak7Q9D2H2 614 aa15.13■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Rundc1Q0VDN7 615 aa15.13■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 U2surpQ6NV83 1029 aaKnown RBP15.13■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Glipr1l2Q9CQ35 332 aa15.13■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 MecomP14404 1042 aa15.12■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Ecm2Q5FW85 670 aa15.11■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Pak3Q61036 559 aa15.11■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Mia2Q91ZV0 1396 aa15.11■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Casq1O09165 405 aa15.1■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Dixdc1Q80Y83 711 aa15.1■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Gripap1Q8VD04 806 aa15.1■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Ccer1Q9CQL2 403 aa15.1■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Kif3aP28741 701 aa15.09■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Golga2Q921M4 999 aa15.09■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Cwc15Q9JHS9 229 aaKnown RBP15.09■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Sh3bgrQ9WUZ7 214 aa15.08■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Ylpm1Q9R0I7 1386 aaKnown RBP15.08■□□□□ 0.01
Pcdhac1-201ENSMUST00000007584 Polr3gQ6NXY9 223 aa15.08■□□□□ 0
Pcdhac1-201ENSMUST00000007584 St18Q80TY4 1045 aa15.08■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Pde3bQ61409 1100 aa15.07■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Eea1Q8BL66 1411 aa15.07■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Kif4P33174 1231 aa15.07■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Ccdc146E9Q9F7 977 aa15.06■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Stag3O70576 1240 aa15.06■□□□□ 0
Pcdhac1-201ENSMUST00000007584 U2af1Q9D883 239 aaKnown RBP15.06■□□□□ 0
Pcdhac1-201ENSMUST00000007584 BbxQ8VBW5 907 aa15.05■□□□□ 0
Pcdhac1-201ENSMUST00000007584 Phf14Q9D4H9 881 aa15.05■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Rnf214Q8BFU3 668 aaKnown RBP15.05■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Ksr2Q3UVC0 959 aa15.04■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms