RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ppp4r2Q0VGB7 417 aa15.99■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Fan1Q69ZT1 1020 aa15.99■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Cc2d2bA0A286YDU8 1405 aa15.97■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Gtf2e1Q9D0D5 440 aa15.97■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Anks4bQ8K3X6 423 aa15.97■□□□□ 0.15
Ctr9-201ENSMUST00000005749 PogzQ8BZH4 1409 aaKnown RBP15.97■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Zfp644E9QA22 1323 aa15.97■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Plb1Q3TTY0 1478 aa15.96■□□□□ 0.15
Ctr9-201ENSMUST00000005749 DiexfQ8BTT6 772 aaKnown RBP15.96■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Spag9Q58A65 1321 aaKnown RBP15.93■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Senp3Q9EP97 568 aaKnown RBP15.93■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Birc3O08863 600 aa15.91■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Srcin1Q9QWI6 1250 aa15.91■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Anp32aO35381 247 aa15.9■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Utp14aQ640M1 767 aaKnown RBP15.9■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Grin2bQ01097 1482 aa15.9■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Top2aQ01320 1528 aaKnown RBP15.9■□□□□ 0.14
Ctr9-201ENSMUST00000005749 Gm6268A2A3U9 297 aa15.89■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Arhgap31A6X8Z5 1425 aa15.89■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Fgd1P52734 960 aa15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Aplp2Q06335 707 aa15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Dcaf11Q91VU6 549 aa15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Rtn4Q99P72 1162 aaKnown RBP15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Mapk8ip3Q9ESN9 1337 aa15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Wdr62Q3U3T8 1523 aa15.88■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Map3k5O35099 1380 aa15.87■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Exoc6Q8R313 802 aa15.87■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Ggt6Q6PDE7 497 aa15.86■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Fgd6Q69ZL1 1399 aa15.86■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Slc4a1apE9PX68 744 aa15.84■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Usp47Q8BY87 1376 aa15.84■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Upf2A2AT37 1269 aaKnown RBP15.84■□□□□ 0.13
Ctr9-201ENSMUST00000005749 NrkQ9R0G8 1455 aa15.83■□□□□ 0.13
Ctr9-201ENSMUST00000005749 Gm7298A0A0N4SVU1 1476 aa15.82■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Shq1Q7TMX5 569 aa15.82■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Naip1Q9QWK5 1403 aa15.8■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Wdr43Q6ZQL4 677 aaKnown RBP15.79■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Mroh2bQ7M6Y6 1581 aa15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 UacaQ8CGB3 1411 aa15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Rock2P70336 1388 aa15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 CadpsQ80TJ1 1355 aa15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 U2af1Q9D883 239 aaKnown RBP15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Fhad1A6PWD2 1420 aa15.78■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Arap1Q4LDD4 1452 aa15.77■□□□□ 0.12
Ctr9-201ENSMUST00000005749 Tmf1B9EKI3 1091 aa15.77■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Armcx1Q9CX83 456 aa15.77■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Pde4cQ3UEI1 686 aa15.76■□□□□ 0.11
Ctr9-201ENSMUST00000005749 EprsQ8CGC7 1512 aaKnown RBP15.76■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Mink1Q9JM52 1308 aa15.76■□□□□ 0.11
Ctr9-201ENSMUST00000005749 U2surpQ6NV83 1029 aaKnown RBP15.75■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Pip4k2bQ80XI4 416 aa15.75■□□□□ 0.11
Ctr9-201ENSMUST00000005749 DaxxO35613 739 aa15.74■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Gm14025A2AP89 1413 aa15.74■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Ncoa2Q61026 1462 aa15.73■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Usp40Q8BWR4 1235 aa15.73■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Speer4f1Q9D5Q6 258 aa15.72■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Camsap1A2AHC3 1581 aa15.71■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Afap1Q80YS6 731 aa15.71■□□□□ 0.11
Ctr9-201ENSMUST00000005749 Pank3Q8R2W9 370 aa15.7■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Dbr1Q923B1 550 aa15.7■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Trim30dE9PWL0 497 aa15.7■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Pibf1E9Q6K3 756 aa15.7■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Inpp5dQ9ES52 1191 aa15.7■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Tnnt1O88346 262 aa15.69■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Slc4a3P16283 1227 aa15.69■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Q9D9H8 365 aa15.69■□□□□ 0.1
Ctr9-201ENSMUST00000005749 SafbD3YXK2 937 aaKnown RBP15.68■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Ift140E9PY46 1464 aa15.68■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Neo1P97798 1493 aa15.68■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Zscan21Q07231 555 aa15.67■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Iqcf3Q9D498 203 aa15.66■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Q8BT18 775 aa15.66■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Tmco5bQ80X59 307 aa15.65■□□□□ 0.1
Ctr9-201ENSMUST00000005749 CrbnQ8C7D2 445 aa15.65■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Arhgap5P97393 1501 aa15.65■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Ubap1lG3UW59 384 aa15.65■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Tcerg1Q8CGF7 1100 aaKnown RBP15.64■□□□□ 0.1
Ctr9-201ENSMUST00000005749 Cabp4Q8VHC5 271 aa15.64■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Polr1aO35134 1717 aaKnown RBP15.64■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Rsph4aQ8BYM7 716 aa15.63■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Crocc2F6XLV1 1638 aa15.63■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Ap3b2Q9JME5 1082 aa15.63■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Znf330Q922H9 316 aa15.62■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Arhgef5E9Q7D5 1581 aa15.62■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Ttll5Q8CHB8 1328 aa15.62■□□□□ 0.09
Ctr9-201ENSMUST00000005749 B4galnt3Q6L8S8 986 aa15.61■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Golga2Q921M4 999 aa15.61■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Top2bQ64511 1612 aa15.61■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Rtf1A2AQ19 715 aaKnown RBP15.61■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Ythdc1E9Q5K9 736 aaKnown RBP15.61■□□□□ 0.09
Ctr9-201ENSMUST00000005749 ErbinQ80TH2 1402 aa15.6■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Fam163aQ8CAA5 168 aa15.6■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Bcl11bQ99PV8 884 aa15.59■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Grin2aP35436 1464 aa15.59■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Dapk1Q80YE7 1442 aa15.59■□□□□ 0.09
Ctr9-201ENSMUST00000005749 CenpjQ569L8 1344 aa15.59■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Prdm16A2A935 1275 aa15.58■□□□□ 0.09
Ctr9-201ENSMUST00000005749 Map3k1P53349 1493 aa15.58■□□□□ 0.08
Ctr9-201ENSMUST00000005749 Lamc3Q9R0B6 1581 aa15.57■□□□□ 0.08
Ctr9-201ENSMUST00000005749 Dhx9O70133 1380 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms