RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Abca8bQ8K440 1620 aa22.49■■□□□ 1.19
Ercc1-201ENSMUST00000003645 3425401B19RikD3Z1D3 1412 aa22.43■■□□□ 1.18
Ercc1-201ENSMUST00000003645 Arid3cA6PWV5 409 aa22.43■■□□□ 1.18
Ercc1-201ENSMUST00000003645 Mlh3A0A1Y7VMP7 1443 aa22.43■■□□□ 1.18
Ercc1-201ENSMUST00000003645 Ak9G3UYQ4 1894 aa22.4■■□□□ 1.18
Ercc1-201ENSMUST00000003645 Adcy10Q8C0T9 1614 aa22.38■■□□□ 1.17
Ercc1-201ENSMUST00000003645 A2mQ6GQT1 1474 aa22.38■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Arhgef40Q3UPH7 1517 aa22.37■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Caskin1Q6P9K8 1431 aa22.37■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Clasp1Q80TV8 1535 aaKnown RBP22.36■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Rnf17Q99MV7 1640 aa22.35■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Ncapd3Q6ZQK0 1506 aa22.34■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Zfyve16Q80U44 1528 aa22.34■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Ttbk1Q6PCN3 1308 aa22.33■■□□□ 1.17
Ercc1-201ENSMUST00000003645 Tdrd9Q14BI7 1383 aa22.31■■□□□ 1.16
Ercc1-201ENSMUST00000003645 Cdk11bP24788 784 aaKnown RBP22.29■■□□□ 1.16
Ercc1-201ENSMUST00000003645 Arhgap5P97393 1501 aa22.28■■□□□ 1.16
Ercc1-201ENSMUST00000003645 Ppp1r18Q8BQ30 594 aa22.27■■□□□ 1.16
Ercc1-201ENSMUST00000003645 Kdm6bQ5NCY0 1641 aa22.26■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Abcc5Q9R1X5 1436 aa22.24■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Gm32742A0A1B0GT42 1604 aa22.23■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Ttc37F8VPK0 1563 aa22.23■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Cfap74Q3UY96 1578 aa22.23■■□□□ 1.15
Ercc1-201ENSMUST00000003645 AglF8VPN4 1532 aa22.21■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Naip2Q9QUK4 1447 aa22.21■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Depdc5P61460 1591 aa22.2■■□□□ 1.15
Ercc1-201ENSMUST00000003645 Abcc3B2RX12 1523 aa22.2■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Trappc8E9PWG2 1437 aa22.2■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Abca9Q8K449 1623 aa22.18■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Pdcd11Q6NS46 1862 aaKnown RBP22.18■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Plekhh2Q8C115 1491 aa22.17■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Mier1Q5UAK0 511 aa22.15■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Mtus2Q3UHD3 1353 aa22.15■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Il16O54824 1322 aa22.15■■□□□ 1.14
Ercc1-201ENSMUST00000003645 Cabp1Q9JLK7 227 aa22.14■■□□□ 1.14
Ercc1-201ENSMUST00000003645 UacaQ8CGB3 1411 aa22.12■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Fam50aQ9WV03 339 aaKnown RBP22.12■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Kidins220E9Q9B7 1793 aa22.11■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Sart1Q9Z315 806 aaKnown RBP22.11■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Chic2Q9D9G3 165 aa22.1■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Mia2Q91ZV0 1396 aa22.09■■□□□ 1.13
Ercc1-201ENSMUST00000003645 Rfx7F8VPJ6 1459 aa22.07■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Lemd3Q9WU40 921 aa22.05■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Neurl4Q5NCX5 1563 aa22.05■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Fhad1A6PWD2 1420 aa22.04■■□□□ 1.12
Ercc1-201ENSMUST00000003645 AdgbG3UZ78 1657 aa22.04■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Kdm3bQ6ZPY7 1562 aa22.03■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Mast1Q9R1L5 1570 aa22.03■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Hecw1Q8K4P8 1604 aa22.02■■□□□ 1.12
Ercc1-201ENSMUST00000003645 Vps8Q0P5W1 1427 aa22.01■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Kiaa0556Q8C753 1610 aa22■■□□□ 1.11
Ercc1-201ENSMUST00000003645 SphkapQ6NSW3 1687 aa22■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Pcdh10E9PXQ7 1057 aa21.99■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Fmn2Q9JL04 1578 aa21.99■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Cdc42bpbQ7TT50 1713 aa21.99■■□□□ 1.11
Ercc1-201ENSMUST00000003645 OvosQ3UU35 1456 aa21.99■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Adgrb2Q8CGM1 1561 aa21.98■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Adgrl2Q8JZZ7 1487 aa21.98■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Prdm16A2A935 1275 aa21.97■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Dennd4bQ3U1Y4 1499 aa21.96■■□□□ 1.11
Ercc1-201ENSMUST00000003645 NclP09405 707 aaKnown RBP21.96■■□□□ 1.11
Ercc1-201ENSMUST00000003645 Acin1Q9JIX8 1338 aaKnown RBP21.95■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Kdm5cP41230 1554 aa21.95■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Fndc1E9Q043 1732 aa21.95■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Rrp7aQ9D1C9 280 aaKnown RBP21.93■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Synj2Q9D2G5 1434 aa21.91■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Atp10aO54827 1508 aa21.91■■□□□ 1.1
Ercc1-201ENSMUST00000003645 Nos1Q9Z0J4 1429 aa21.89■■□□□ 1.09
Ercc1-201ENSMUST00000003645 Map3k5O35099 1380 aa21.87■■□□□ 1.09
Ercc1-201ENSMUST00000003645 Ptch1Q61115 1434 aa21.86■■□□□ 1.09
Ercc1-201ENSMUST00000003645 Hecw2Q6I6G8 1578 aa21.84■■□□□ 1.09
Ercc1-201ENSMUST00000003645 Ssh2Q5SW75 1423 aa21.84■■□□□ 1.09
Ercc1-201ENSMUST00000003645 Ccer2J3QPU5 274 aa21.83■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Dip2cE9PWR4 1557 aa21.82■■□□□ 1.08
Ercc1-201ENSMUST00000003645 AlkP97793 1621 aa21.82■■□□□ 1.08
Ercc1-201ENSMUST00000003645 RereQ80TZ9 1558 aa21.8■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Zfp644E9QA22 1323 aa21.78■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Spag9Q58A65 1321 aaKnown RBP21.78■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Fhod3Q76LL6 1578 aa21.78■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Yeats2Q3TUF7 1407 aa21.77■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Znf518aB2RRF6 1478 aaKnown RBP21.77■■□□□ 1.08
Ercc1-201ENSMUST00000003645 Trpm2Q91YD4 1506 aa21.76■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Xrn1P97789 1719 aaKnown RBP21.75■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Ube2uB1AUC4 352 aa21.74■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Abca17E9PX95 1733 aa21.73■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Nup155Q99P88 1391 aaKnown RBP21.73■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Cdc42bpgQ80UW5 1551 aa21.72■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Dnajc5gQ8C632 165 aa21.71■■□□□ 1.07
Ercc1-201ENSMUST00000003645 Clstn2Q9ER65 966 aa21.69■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Zmym4A2A791 1549 aaKnown RBP21.68■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Mphosph9A6H5Y1 991 aa21.68■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Map4P27546 1125 aaKnown RBP21.68■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Kif3bQ61771 747 aa21.68■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Usp54Q8BL06 1588 aaKnown RBP21.68■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Naip6Q9JIB6 1403 aa21.67■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Ttll5Q8CHB8 1328 aa21.66■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Topbp1Q6ZQF0 1515 aa21.66■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Plch2A2AP18 1501 aa21.65■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Pde4cQ3UEI1 686 aa21.65■■□□□ 1.06
Ercc1-201ENSMUST00000003645 Gli2Q0VGT2 1544 aa21.65■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms