RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 MRP13P12686 339 aa2.48□□□□□ -2.01
snR54snR54 PMR1P13586 950 aa2.48□□□□□ -2.01
snR54snR54 PRE8P23639 250 aa2.48□□□□□ -2.01
snR54snR54 YCR007CP25354 239 aa2.48□□□□□ -2.01
snR54snR54 YIH1P25637 258 aa2.48□□□□□ -2.01
snR54snR54 FUN19P28003 413 aaPredicted RBP2.48□□□□□ -2.01
snR54snR54 LYS14P40971 790 aa2.48□□□□□ -2.01
snR54snR54 YGL242CP53066 181 aa2.48□□□□□ -2.01
snR54snR54 COQ9Q05779 260 aa2.48□□□□□ -2.01
snR54snR54 PHO92Q06390 306 aa2.48□□□□□ -2.01
snR54snR54 SUC2P00724 532 aa2.47□□□□□ -2.01
snR54snR54 RPL19AP0CX82 189 aaKnown RBP2.47□□□□□ -2.01
snR54snR54 RPL19BP0CX83 189 aaPredicted RBP2.47□□□□□ -2.01
snR54snR54 SUI2P20459 304 aaKnown RBP2.47□□□□□ -2.01
snR54snR54 YCK1P23291 538 aa2.47□□□□□ -2.01
snR54snR54 VPS24P36095 224 aaKnown RBP2.47□□□□□ -2.01
snR54snR54 CIN4P39110 191 aa2.47□□□□□ -2.01
snR54snR54 PRE5P40302 234 aaKnown RBP2.47□□□□□ -2.01
snR54snR54 RBG2P53295 368 aaKnown RBP2.47□□□□□ -2.01
snR54snR54 IRC15Q02733 499 aa2.47□□□□□ -2.01
snR54snR54 YOR387CQ08910 206 aa2.47□□□□□ -2.01
snR54snR54 CPR1P14832 162 aaKnown RBP2.46□□□□□ -2.02
snR54snR54 NAM9P27929 486 aa2.46□□□□□ -2.02
snR54snR54 CHS3P29465 1165 aa2.46□□□□□ -2.02
snR54snR54 GWT1P47026 490 aa2.46□□□□□ -2.02
snR54snR54 RPC11Q04307 110 aaPredicted RBP2.46□□□□□ -2.02
snR54snR54 FMP40Q08968 688 aaPredicted RBP2.46□□□□□ -2.02
snR54snR54 EST1P17214 699 aaPredicted RBP2.45□□□□□ -2.02
snR54snR54 YEL045CP32616 141 aa2.45□□□□□ -2.02
snR54snR54 UTR4P32626 227 aa2.45□□□□□ -2.02
snR54snR54 CCT6P39079 546 aa2.45□□□□□ -2.02
snR54snR54 YIL067CP40514 678 aa2.45□□□□□ -2.02
snR54snR54 IPI3P53877 555 aa2.45□□□□□ -2.02
snR54snR54 NGL3Q03210 505 aa2.45□□□□□ -2.02
snR54snR54 VPS74Q06385 345 aa2.45□□□□□ -2.02
snR54snR54 THP1Q08231 455 aa2.45□□□□□ -2.02
snR54snR54 LSP1Q12230 341 aaKnown RBP2.45□□□□□ -2.02
snR54snR54 ART10P18634 518 aaKnown RBP2.44□□□□□ -2.02
snR54snR54 ELO2P25358 347 aa2.44□□□□□ -2.02
snR54snR54 PWP2P25635 923 aaKnown RBP2.44□□□□□ -2.02
snR54snR54 MSN2P33748 704 aa2.44□□□□□ -2.02
snR54snR54 YBL029WP38201 376 aa2.44□□□□□ -2.02
snR54snR54 TCM62P38228 572 aaKnown RBP2.44□□□□□ -2.02
snR54snR54 TIF4631P39935 952 aaKnown RBP2.44□□□□□ -2.02
snR54snR54 AIM22P47051 409 aa2.44□□□□□ -2.02
snR54snR54 MEP3P53390 489 aa2.44□□□□□ -2.02
snR54snR54 VMS1Q04311 632 aaKnown RBP2.44□□□□□ -2.02
snR54snR54 YKU80Q04437 629 aa2.44□□□□□ -2.02
snR54snR54 BSC6Q08280 497 aa2.44□□□□□ -2.02
snR54snR54 CFT2Q12102 859 aaPredicted RBP2.44□□□□□ -2.02
snR54snR54 RKM5Q12367 367 aa2.44□□□□□ -2.02
snR54snR54 MES1P00958 751 aaKnown RBP2.43□□□□□ -2.02
snR54snR54 CHS1P08004 1131 aa2.43□□□□□ -2.02
snR54snR54 YIM1P28625 365 aa2.43□□□□□ -2.02
snR54snR54 SHP1P34223 423 aa2.43□□□□□ -2.02
snR54snR54 BNA4P38169 460 aa2.43□□□□□ -2.02
snR54snR54 NDT80P38830 627 aa2.43□□□□□ -2.02
snR54snR54 ELP2P42935 788 aa2.43□□□□□ -2.02
snR54snR54 DUO1P53168 247 aaKnown RBP2.43□□□□□ -2.02
snR54snR54 GPI1P53306 609 aa2.43□□□□□ -2.02
snR54snR54 PIR3Q03180 325 aa2.43□□□□□ -2.02
snR54snR54 RBS1Q05672 457 aaKnown RBP2.43□□□□□ -2.02
snR54snR54 TMC1Q08422 150 aaPredicted RBP2.43□□□□□ -2.02
snR54snR54 RRP12Q12754 1228 aaKnown RBP2.43□□□□□ -2.02
snR54snR54 YBR126W-AQ8TGU7 68 aa2.43□□□□□ -2.02
snR54snR54 LPD1P09624 499 aaKnown RBP2.42□□□□□ -2.02
snR54snR54 CDC16P09798 840 aa2.42□□□□□ -2.02
snR54snR54 SPT15P13393 240 aaKnown RBP2.42□□□□□ -2.02
snR54snR54 EXO70P19658 623 aa2.42□□□□□ -2.02
snR54snR54 DEG1P31115 442 aaKnown RBP2.42□□□□□ -2.02
snR54snR54 YME1P32795 747 aa2.42□□□□□ -2.02
snR54snR54 MRP4P32902 394 aa2.42□□□□□ -2.02
snR54snR54 YBL059WP34224 193 aa2.42□□□□□ -2.02
snR54snR54 DUG2P38149 878 aa2.42□□□□□ -2.02
snR54snR54 RRT2P38332 387 aa2.42□□□□□ -2.02
snR54snR54 MTC6P38849 526 aa2.42□□□□□ -2.02
snR54snR54 PTH1P38876 190 aaKnown RBP2.42□□□□□ -2.02
snR54snR54 FAU1P40099 211 aa2.42□□□□□ -2.02
snR54snR54 GCD10P41814 478 aa2.42□□□□□ -2.02
snR54snR54 IMD4P50094 524 aaKnown RBP2.42□□□□□ -2.02
snR54snR54 ARK1P53974 638 aa2.42□□□□□ -2.02
snR54snR54 TOF2Q02208 771 aa2.42□□□□□ -2.02
snR54snR54 TMS1Q12116 473 aa2.42□□□□□ -2.02
snR54snR54 HIP1P06775 603 aa2.41□□□□□ -2.02
snR54snR54 SEF1P34228 1148 aa2.41□□□□□ -2.02
snR54snR54 MUD2P36084 527 aaKnown RBP2.41□□□□□ -2.02
snR54snR54 SWD3P38123 315 aa2.41□□□□□ -2.02
snR54snR54 ALG5P40350 334 aa2.41□□□□□ -2.02
snR54snR54 SGN1P40561 250 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
snR54snR54 ALK1P43633 760 aaKnown RBP2.41□□□□□ -2.02
snR54snR54 AVT4P50944 713 aa2.41□□□□□ -2.02
snR54snR54 ZPR1P53303 486 aaKnown RBP2.41□□□□□ -2.02
snR54snR54 ELP3Q02908 557 aaKnown RBP2.41□□□□□ -2.02
snR54snR54 YMR018WQ04364 514 aa2.41□□□□□ -2.02
snR54snR54 HEL2Q05580 639 aaKnown RBP2.41□□□□□ -2.02
snR54snR54 PBA1Q05778 276 aa2.41□□□□□ -2.02
snR54snR54 ERV2Q12284 196 aa2.41□□□□□ -2.02
snR54snR54 CLN3P13365 580 aa2.4□□□□□ -2.03
snR54snR54 HEM15P16622 393 aa2.4□□□□□ -2.03
snR54snR54 GLK1P17709 500 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms