RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	HEM12	P32347	362 aa	Predicted RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	HOG1	P32485	435 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	SPS19	P32573	292 aa	Known RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	PHO11	P35842	467 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	EMC3	P36039	253 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	PSY4	P38193	441 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	YBR259W	P38338	688 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	PHO12	P38693	467 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	DED81	P38707	554 aa	Known RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	CYC2	P38909	366 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	STN1	P38960	494 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	KHA1	P40309	873 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	RFX1	P48743	811 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	FRE4	P53746	719 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	LDB18	Q07887	179 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	ETT1	Q08421	412 aa	Known RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	TMA16	Q08687	178 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	SMF3	Q12078	473 aa	Predicted RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	TMS1	Q12116	473 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	HSP42	Q12329	375 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	AI5_ALPHA	Q9ZZX1	630 aa		4.2	□□□□□ -1.74
SPN1	YPR133C	FAS1	P07149	2051 aa	Known RBP	4.2	□□□□□ -1.74
SPN1	YPR133C	PCT1	P13259	424 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	GFA1	P14742	717 aa	Known RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	PET309	P32522	965 aa	Predicted RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	REC104	P33323	182 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	SKN1	P33336	771 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	GMH1	P36125	273 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	DBP8	P38719	431 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	LRO1	P40345	661 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	HIS6	P40545	261 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	TES1	P41903	349 aa	Known RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	IKS1	P47042	667 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	DAM1	P53267	343 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	GND2	P53319	492 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	ARP4	P80428	489 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	ARX1	Q03862	593 aa	Known RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	REH1	Q06709	432 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	YLR030W	Q07967	263 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	NEW1	Q08972	1196 aa	Known RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	ENV7	Q12003	364 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	TGL5	Q12043	749 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	RRP12	Q12754	1228 aa	Known RBP	4.19	□□□□□ -1.74
SPN1	YPR133C	YOL087C	Q99247	1116 aa		4.19	□□□□□ -1.74
SPN1	YPR133C	MSS18	P08593	268 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SPN1	YPR133C	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	YSR3	P23501	404 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	GFD2	P25370	566 aa	Known RBP	4.18	□□□□□ -1.74
SPN1	YPR133C	MEI4	P29467	408 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	SIN4	P32259	974 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	DCG1	P32460	244 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	JNM1	P36224	373 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	OTU2	P38747	307 aa	Known RBP	4.18	□□□□□ -1.74
SPN1	YPR133C	PCL5	P38794	229 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	MTG2	P38860	518 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	LYS1	P38998	373 aa	RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
SPN1	YPR133C	VFA1	P40080	203 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	EMP65	P40085	556 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	RET2	P43621	546 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	ASK10	P48361	1146 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	ARE2	P53629	642 aa	Known RBP	4.18	□□□□□ -1.74
SPN1	YPR133C	RHO3	Q00245	231 aa	Known RBP	4.18	□□□□□ -1.74
SPN1	YPR133C	CDC14	Q00684	551 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	PEX25	Q02969	394 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	IVY1	Q04934	453 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	YDR338C	Q05497	695 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	AAD15	Q08361	143 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	NPC2	Q12408	173 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	KCS1	Q12494	1050 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	YLR149C	Q99296	730 aa		4.18	□□□□□ -1.74
SPN1	YPR133C	CPA1	P07258	411 aa	Known RBP	4.17	□□□□□ -1.74
SPN1	YPR133C	ILS1	P09436	1072 aa	Known RBP	4.17	□□□□□ -1.74
SPN1	YPR133C	HOP1	P20050	605 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	SEC62	P21825	274 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	RFA1	P22336	621 aa	Known RBP	4.17	□□□□□ -1.74
SPN1	YPR133C	VPS34	P22543	875 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	SEC65	P29478	273 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	MCM10	P32354	571 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	CTP1	P38152	299 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	YHR033W	P38690	423 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	YEL073C	P39974	107 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	MNT3	P40549	630 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	EXG2	P52911	562 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	SAP4	P53036	818 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	ECM9	Q02202	377 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	UPC2	Q12151	913 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	NTO1	Q12311	748 aa		4.17	□□□□□ -1.74
SPN1	YPR133C	BCY1	P07278	416 aa	Known RBP	4.16	□□□□□ -1.74
SPN1	YPR133C	PHO81	P17442	1178 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	YSP3	P25036	478 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	IMG1	P25626	169 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	TOA1	P32773	286 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	NTR2	P36118	322 aa	Predicted RBP	4.16	□□□□□ -1.74
SPN1	YPR133C	QRI7	P43122	407 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	SRB7	P47822	140 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	PHO23	P50947	330 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	SLD3	P53135	668 aa		4.16	□□□□□ -1.74
SPN1	YPR133C	NOG2	P53742	486 aa	Known RBP	4.16	□□□□□ -1.74
SPN1	YPR133C	RRN11	Q04712	507 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms