RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YGL242CP53066 181 aa1.53□□□□□ -2.17
NIP100YPL174C PIR3Q03180 325 aa1.53□□□□□ -2.17
NIP100YPL174C HSH49Q99181 213 aaPredicted RBP1.53□□□□□ -2.17
NIP100YPL174C RAV1P47104 1357 aa1.52□□□□□ -2.17
NIP100YPL174C HEM2P05373 342 aa1.52□□□□□ -2.17
NIP100YPL174C MRS3P10566 314 aa1.52□□□□□ -2.17
NIP100YPL174C FUN19P28003 413 aaPredicted RBP1.52□□□□□ -2.17
NIP100YPL174C CHS3P29465 1165 aa1.52□□□□□ -2.17
NIP100YPL174C NUP133P36161 1157 aa1.52□□□□□ -2.17
NIP100YPL174C FUI1P38196 639 aa1.52□□□□□ -2.17
NIP100YPL174C PCA1P38360 1216 aa1.52□□□□□ -2.17
NIP100YPL174C FMP10P40098 244 aa1.52□□□□□ -2.17
NIP100YPL174C CAF130P53280 1122 aaPredicted RBP1.52□□□□□ -2.17
NIP100YPL174C PHO92Q06390 306 aa1.52□□□□□ -2.17
NIP100YPL174C SYO1Q07395 620 aa1.52□□□□□ -2.17
NIP100YPL174C NOP58Q12499 511 aaKnown RBP1.52□□□□□ -2.17
NIP100YPL174C KGD1P20967 1014 aaKnown RBP1.52□□□□□ -2.17
NIP100YPL174C YCK1P23291 538 aa1.52□□□□□ -2.17
NIP100YPL174C PUT3P25502 979 aaPredicted RBP1.52□□□□□ -2.17
NIP100YPL174C SAC6P32599 642 aaKnown RBP1.52□□□□□ -2.17
NIP100YPL174C DOT5P40553 215 aa1.52□□□□□ -2.17
NIP100YPL174C LYS4P49367 693 aaPredicted RBP1.52□□□□□ -2.17
NIP100YPL174C OPY2Q06810 360 aa1.52□□□□□ -2.17
NIP100YPL174C MUM3Q08750 479 aa1.52□□□□□ -2.17
NIP100YPL174C YAR066WP0CX18 203 aa1.51□□□□□ -2.17
NIP100YPL174C YHR214WP0CX19 203 aa1.51□□□□□ -2.17
NIP100YPL174C MRP13P12686 339 aa1.51□□□□□ -2.17
NIP100YPL174C ATR1P13090 542 aa1.51□□□□□ -2.17
NIP100YPL174C DUO1P53168 247 aaKnown RBP1.51□□□□□ -2.17
NIP100YPL174C ZPR1P53303 486 aaKnown RBP1.51□□□□□ -2.17
NIP100YPL174C CAF40P53829 373 aa1.51□□□□□ -2.17
NIP100YPL174C RPT6Q01939 405 aaKnown RBP1.51□□□□□ -2.17
NIP100YPL174C TOF2Q02208 771 aa1.51□□□□□ -2.17
NIP100YPL174C SLD5Q03406 294 aa1.51□□□□□ -2.17
NIP100YPL174C TFC6Q06339 672 aa1.51□□□□□ -2.17
NIP100YPL174C NAT2P37293 288 aa1.51□□□□□ -2.17
NIP100YPL174C RMD8P43620 662 aa1.51□□□□□ -2.17
NIP100YPL174C RRN11Q04712 507 aa1.51□□□□□ -2.17
NIP100YPL174C YPL199CQ08954 240 aa1.51□□□□□ -2.17
NIP100YPL174C RCN2Q12044 265 aa1.51□□□□□ -2.17
NIP100YPL174C YCL021W-AQ96VH3 125 aa1.51□□□□□ -2.17
NIP100YPL174C BRR1Q99177 341 aaPredicted RBP1.51□□□□□ -2.17
NIP100YPL174C MES1P00958 751 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C YCR007CP25354 239 aa1.5□□□□□ -2.17
NIP100YPL174C GFD2P25370 566 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C REC114P32841 428 aa1.5□□□□□ -2.17
NIP100YPL174C MSN2P33748 704 aa1.5□□□□□ -2.17
NIP100YPL174C DED81P38707 554 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C MSR1P38714 643 aa1.5□□□□□ -2.17
NIP100YPL174C IDP2P41939 412 aa1.5□□□□□ -2.17
NIP100YPL174C GWT1P47026 490 aa1.5□□□□□ -2.17
NIP100YPL174C IMD4P50094 524 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C POP6P53218 158 aa1.5□□□□□ -2.17
NIP100YPL174C YDR239CQ03780 787 aa1.5□□□□□ -2.17
NIP100YPL174C PBA1Q05778 276 aa1.5□□□□□ -2.17
NIP100YPL174C CDC16P09798 840 aa1.5□□□□□ -2.17
NIP100YPL174C HSC82P15108 705 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C YEL045CP32616 141 aa1.5□□□□□ -2.17
NIP100YPL174C ARP1P38696 384 aa1.5□□□□□ -2.17
NIP100YPL174C PTH1P38876 190 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C YHR210CP38893 341 aa1.5□□□□□ -2.17
NIP100YPL174C NCA3P46955 337 aa1.5□□□□□ -2.17
NIP100YPL174C HCR1Q05775 265 aaKnown RBP1.5□□□□□ -2.17
NIP100YPL174C YOR387CQ08910 206 aa1.5□□□□□ -2.17
NIP100YPL174C GAL80P04387 435 aa1.49□□□□□ -2.17
NIP100YPL174C CRM1P30822 1084 aaKnown RBP1.49□□□□□ -2.17
NIP100YPL174C FRE2P36033 711 aa1.49□□□□□ -2.17
NIP100YPL174C BOR1P53838 576 aa1.49□□□□□ -2.17
NIP100YPL174C GOR1P53839 350 aa1.49□□□□□ -2.17
NIP100YPL174C RPM2Q02773 1202 aa1.49□□□□□ -2.17
NIP100YPL174C HNT3Q08702 217 aa1.49□□□□□ -2.17
NIP100YPL174C RAD52P06778 471 aaKnown RBP1.49□□□□□ -2.17
NIP100YPL174C LDB16P25587 256 aa1.49□□□□□ -2.17
NIP100YPL174C NDI1P32340 513 aa1.49□□□□□ -2.17
NIP100YPL174C CST26P38226 397 aa1.49□□□□□ -2.17
NIP100YPL174C ISC1P40015 477 aaKnown RBP1.49□□□□□ -2.17
NIP100YPL174C IES5P40060 125 aa1.49□□□□□ -2.17
NIP100YPL174C YIL067CP40514 678 aa1.49□□□□□ -2.17
NIP100YPL174C OCA1P50946 238 aaPredicted RBP1.49□□□□□ -2.17
NIP100YPL174C COS10P52924 374 aa1.49□□□□□ -2.17
NIP100YPL174C YGR066CP53242 292 aa1.49□□□□□ -2.17
NIP100YPL174C MSO1P53604 210 aaKnown RBP1.49□□□□□ -2.17
NIP100YPL174C VPS38Q05919 439 aa1.49□□□□□ -2.17
NIP100YPL174C CFT2Q12102 859 aaPredicted RBP1.49□□□□□ -2.17
NIP100YPL174C CTF3Q12748 733 aa1.49□□□□□ -2.17
NIP100YPL174C LEU4P06208 619 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C COR1P07256 457 aa1.48□□□□□ -2.17
NIP100YPL174C LPD1P09624 499 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C SYN8P31377 255 aa1.48□□□□□ -2.17
NIP100YPL174C UTR4P32626 227 aa1.48□□□□□ -2.17
NIP100YPL174C MUD2P36084 527 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C SPG5P42933 373 aa1.48□□□□□ -2.17
NIP100YPL174C YJR154WP47181 346 aa1.48□□□□□ -2.17
NIP100YPL174C MEP3P53390 489 aa1.48□□□□□ -2.17
NIP100YPL174C ARK1P53974 638 aa1.48□□□□□ -2.17
NIP100YPL174C ESA1Q08649 445 aa1.48□□□□□ -2.17
NIP100YPL174C SAM1P10659 382 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C SRV2P17555 526 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C SAM2P19358 384 aaKnown RBP1.48□□□□□ -2.17
NIP100YPL174C MCM10P32354 571 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms