RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YPL272CQ08984 517 aa1.22□□□□□ -2.21
SGF11YPL047W NBP2Q12163 236 aa1.22□□□□□ -2.21
SGF11YPL047W NCE102Q12207 173 aaRIP-Chip data1.22□□□□□ -2.21not detected
SGF11YPL047W LSP1Q12230 341 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W WTM1Q12363 437 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W YLR302CO13544 120 aa1.21□□□□□ -2.22
SGF11YPL047W HIP1P06775 603 aa1.21□□□□□ -2.22
SGF11YPL047W PET123P17558 318 aa1.21□□□□□ -2.22
SGF11YPL047W CPR4P25334 318 aa1.21□□□□□ -2.22
SGF11YPL047W CDC60P26637 1090 aaKnown RBP1.21□□□□□ -2.22
SGF11YPL047W SYN8P31377 255 aa1.21□□□□□ -2.22
SGF11YPL047W KTR3P38130 404 aaPredicted RBP1.21□□□□□ -2.22
SGF11YPL047W UME6P39001 836 aa1.21□□□□□ -2.22
SGF11YPL047W FAR3P46671 204 aa1.21□□□□□ -2.22
SGF11YPL047W GWT1P47026 490 aa1.21□□□□□ -2.22
SGF11YPL047W YGR127WP53275 312 aa1.21□□□□□ -2.22
SGF11YPL047W BUD32P53323 261 aa1.21□□□□□ -2.22
SGF11YPL047W MSC1Q03104 513 aa1.21□□□□□ -2.22
SGF11YPL047W TSR1Q07381 788 aaKnown RBP1.21□□□□□ -2.22
SGF11YPL047W PSR1Q07800 427 aa1.21□□□□□ -2.22
SGF11YPL047W YOL087CQ99247 1116 aa1.21□□□□□ -2.22
SGF11YPL047W SNF1P06782 633 aaKnown RBP1.2□□□□□ -2.22
SGF11YPL047W SUI2P20459 304 aaKnown RBP1.2□□□□□ -2.22
SGF11YPL047W VMA16P23968 213 aa1.2□□□□□ -2.22
SGF11YPL047W UTR4P32626 227 aa1.2□□□□□ -2.22
SGF11YPL047W CNS1P33313 385 aa1.2□□□□□ -2.22
SGF11YPL047W YBL055CP34220 418 aaPredicted RBP1.2□□□□□ -2.22
SGF11YPL047W ALY1P36117 915 aa1.2□□□□□ -2.22
SGF11YPL047W PIM1P36775 1133 aa1.2□□□□□ -2.22
SGF11YPL047W DRN1P53255 507 aaKnown RBP1.2□□□□□ -2.22
SGF11YPL047W VID22Q05934 901 aa1.2□□□□□ -2.22
SGF11YPL047W TRM8Q12009 286 aa1.2□□□□□ -2.22
SGF11YPL047W NYV1Q12255 253 aa1.2□□□□□ -2.22
SGF11YPL047W CHS1P08004 1131 aa1.19□□□□□ -2.22
SGF11YPL047W APA1P16550 321 aaKnown RBP1.19□□□□□ -2.22
SGF11YPL047W BOS1P25385 244 aa1.19□□□□□ -2.22
SGF11YPL047W DBF20P32328 564 aa1.19□□□□□ -2.22
SGF11YPL047W PAH1P32567 862 aa1.19□□□□□ -2.22
SGF11YPL047W SSE2P32590 693 aaKnown RBP1.19□□□□□ -2.22
SGF11YPL047W PTH2P34222 208 aa1.19□□□□□ -2.22
SGF11YPL047W NAT2P37293 288 aa1.19□□□□□ -2.22
SGF11YPL047W PSY4P38193 441 aa1.19□□□□□ -2.22
SGF11YPL047W ICS2P38284 255 aa1.19□□□□□ -2.22
SGF11YPL047W CIN4P39110 191 aa1.19□□□□□ -2.22
SGF11YPL047W YER010CP40011 234 aa1.19□□□□□ -2.22
SGF11YPL047W SAP185P40856 1058 aa1.19□□□□□ -2.22
SGF11YPL047W ARC1P46672 376 aaKnown RBP1.19□□□□□ -2.22
SGF11YPL047W SIP4P46954 829 aa1.19□□□□□ -2.22
SGF11YPL047W DSD1P53095 428 aa1.19□□□□□ -2.22
SGF11YPL047W TOF1P53840 1238 aa1.19□□□□□ -2.22
SGF11YPL047W TSA2Q04120 196 aa1.19□□□□□ -2.22
SGF11YPL047W DPB4Q04603 196 aaKnown RBP1.19□□□□□ -2.22
SGF11YPL047W HRI1Q05905 244 aaKnown RBP1.19□□□□□ -2.22
SGF11YPL047W YLR108CQ12259 485 aa1.19□□□□□ -2.22
SGF11YPL047W MF(ALPHA)1P01149 165 aa1.18□□□□□ -2.22
SGF11YPL047W PEP4P07267 405 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W YEF3P16521 1044 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W MFT1P33441 392 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W YBR144CP34215 104 aa1.18□□□□□ -2.22
SGF11YPL047W RPL32P38061 130 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W DUG2P38149 878 aa1.18□□□□□ -2.22
SGF11YPL047W WWM1P43582 211 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W ALK1P43633 760 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W YGR126WP53274 230 aa1.18□□□□□ -2.22
SGF11YPL047W PEX25Q02969 394 aa1.18□□□□□ -2.22
SGF11YPL047W PHO92Q06390 306 aa1.18□□□□□ -2.22
SGF11YPL047W YDL057WQ07379 328 aa1.18□□□□□ -2.22
SGF11YPL047W RIX7Q07844 837 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W KEL3Q08979 651 aaPredicted RBP1.18□□□□□ -2.22
SGF11YPL047W THP3Q12049 470 aaKnown RBP1.18□□□□□ -2.22
SGF11YPL047W SSM4P40318 1319 aa1.17□□□□□ -2.22
SGF11YPL047W RAD52P06778 471 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W GLK1P17709 500 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W KGD1P20967 1014 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W DAL2P25335 343 aa1.17□□□□□ -2.22
SGF11YPL047W IMG1P25626 169 aa1.17□□□□□ -2.22
SGF11YPL047W CRM1P30822 1084 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W IES5P40060 125 aa1.17□□□□□ -2.22
SGF11YPL047W KAP123P40069 1113 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W PAN6P40459 309 aa1.17□□□□□ -2.22
SGF11YPL047W RRT5P43607 289 aa1.17□□□□□ -2.22
SGF11YPL047W YGR021WP53212 290 aa1.17□□□□□ -2.22
SGF11YPL047W GPI1P53306 609 aa1.17□□□□□ -2.22
SGF11YPL047W OGG1P53397 376 aaPredicted RBP1.17□□□□□ -2.22
SGF11YPL047W BSC5P53755 489 aa1.17□□□□□ -2.22
SGF11YPL047W GOR1P53839 350 aa1.17□□□□□ -2.22
SGF11YPL047W IBD2P53892 351 aa1.17□□□□□ -2.22
SGF11YPL047W SNO4Q04902 237 aa1.17□□□□□ -2.22
SGF11YPL047W RBS1Q05672 457 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W HSP33Q08914 237 aaKnown RBP1.17□□□□□ -2.22
SGF11YPL047W HSP32Q08992 237 aa1.17□□□□□ -2.22
SGF11YPL047W BRR1Q99177 341 aaPredicted RBP1.17□□□□□ -2.22
SGF11YPL047W ARD1P07347 238 aaPredicted RBP1.16□□□□□ -2.22
SGF11YPL047W FUM1P08417 488 aaKnown RBP1.16□□□□□ -2.22
SGF11YPL047W RPL19AP0CX82 189 aaKnown RBP1.16□□□□□ -2.22
SGF11YPL047W RPL19BP0CX83 189 aaPredicted RBP1.16□□□□□ -2.22
SGF11YPL047W HSP26P15992 214 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SGF11YPL047W ART10P18634 518 aaKnown RBP1.16□□□□□ -2.22
SGF11YPL047W NDI1P32340 513 aa1.16□□□□□ -2.22
SGF11YPL047W SHP1P34223 423 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms