RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C PMT6P42934 759 aa3.2□□□□□ -1.9
LCB4YOR171C SNZ3P43545 298 aa3.2□□□□□ -1.9
LCB4YOR171C YFR018CP43599 363 aa3.2□□□□□ -1.9
LCB4YOR171C ARC1P46672 376 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C NET1P47035 1189 aa3.2□□□□□ -1.9
LCB4YOR171C URB2P47108 1174 aa3.2□□□□□ -1.9
LCB4YOR171C MRK1P50873 501 aa3.2□□□□□ -1.9
LCB4YOR171C YIP4P53093 235 aa3.2□□□□□ -1.9
LCB4YOR171C YGL138CP53122 345 aa3.2□□□□□ -1.9
LCB4YOR171C SNZ2P53824 298 aa3.2□□□□□ -1.9
LCB4YOR171C YNL134CP53912 376 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C SAM50P53969 484 aa3.2□□□□□ -1.9
LCB4YOR171C RPS15Q01855 142 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C ARX1Q03862 593 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C YLR455WQ06188 304 aa3.2□□□□□ -1.9
LCB4YOR171C GMC2Q06201 188 aa3.2□□□□□ -1.9
LCB4YOR171C IWR1Q07532 353 aaPredicted RBP3.2□□□□□ -1.9
LCB4YOR171C SNA4Q07549 140 aa3.2□□□□□ -1.9
LCB4YOR171C AAD4Q07747 329 aa3.2□□□□□ -1.9
LCB4YOR171C RIM20Q12033 661 aa3.2□□□□□ -1.9
LCB4YOR171C MRH1Q12117 320 aaPredicted RBP3.2□□□□□ -1.9
LCB4YOR171C LEU9Q12166 604 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C MED4Q12343 284 aa3.2□□□□□ -1.9
LCB4YOR171C SEC12P11655 471 aa3.2□□□□□ -1.9
LCB4YOR171C APA2P22108 325 aa3.2□□□□□ -1.9
LCB4YOR171C GEX1P25596 615 aa3.2□□□□□ -1.9
LCB4YOR171C ICL1P28240 557 aaPredicted RBP3.2□□□□□ -1.9
LCB4YOR171C TIF3P34167 436 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C OPY1P38271 328 aa3.2□□□□□ -1.9
LCB4YOR171C POP7P38291 140 aa3.2□□□□□ -1.9
LCB4YOR171C PFK26P40433 827 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C AGE2P40529 298 aa3.2□□□□□ -1.9
LCB4YOR171C VMA13P41807 478 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C BNA6P43619 295 aa3.2□□□□□ -1.9
LCB4YOR171C PNC1P53184 216 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C YGR111WP53265 400 aa3.2□□□□□ -1.9
LCB4YOR171C COQ6P53318 479 aa3.2□□□□□ -1.9
LCB4YOR171C PET117Q02771 107 aa3.2□□□□□ -1.9
LCB4YOR171C MFM1Q02783 413 aa3.2□□□□□ -1.9
LCB4YOR171C TRS31Q03337 283 aa3.2□□□□□ -1.9
LCB4YOR171C YDR179W-AQ03983 463 aa3.2□□□□□ -1.9
LCB4YOR171C RBS1Q05672 457 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C CMS1Q07897 291 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C DCI1Q08558 271 aa3.2□□□□□ -1.9
LCB4YOR171C NBP2Q12163 236 aa3.2□□□□□ -1.9
LCB4YOR171C RSR1P13856 272 aa3.19□□□□□ -1.9
LCB4YOR171C YAK1P14680 807 aa3.19□□□□□ -1.9
LCB4YOR171C SEC63P14906 663 aa3.19□□□□□ -1.9
LCB4YOR171C PRP16P15938 1071 aaPredicted RBP3.19□□□□□ -1.9
LCB4YOR171C SIR1P21691 654 aa3.19□□□□□ -1.9
LCB4YOR171C KIN3P22209 435 aa3.19□□□□□ -1.9
LCB4YOR171C MRPL8P22353 238 aa3.19□□□□□ -1.9
LCB4YOR171C SWI4P25302 1093 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C RPS7AP26786 190 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C PRS1P32895 427 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C SEF1P34228 1148 aa3.19□□□□□ -1.9
LCB4YOR171C YKL070WP36087 169 aa3.19□□□□□ -1.9
LCB4YOR171C ATP3P38077 311 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C YBL029WP38201 376 aa3.19□□□□□ -1.9
LCB4YOR171C SEC31P38968 1273 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C ALG5P40350 334 aa3.19□□□□□ -1.9
LCB4YOR171C CAK1P43568 368 aaPredicted RBP3.19□□□□□ -1.9
LCB4YOR171C EMC2P47133 292 aaKnown RBP3.19□□□□□ -1.9
LCB4YOR171C COS12P53053 380 aa3.19□□□□□ -1.9
LCB4YOR171C RRP46P53256 223 aaPredicted RBP3.19□□□□□ -1.9
LCB4YOR171C YMR102CQ03177 834 aa3.19□□□□□ -1.9
LCB4YOR171C USA1Q03714 838 aa3.19□□□□□ -1.9
LCB4YOR171C TRS23Q03784 219 aa3.19□□□□□ -1.9
LCB4YOR171C RAD30Q04049 632 aa3.19□□□□□ -1.9
LCB4YOR171C CRF1Q04930 467 aa3.19□□□□□ -1.9
LCB4YOR171C VPS38Q05919 439 aa3.19□□□□□ -1.9
LCB4YOR171C ATG17Q06410 417 aa3.19□□□□□ -1.9
LCB4YOR171C CRD1Q07560 283 aa3.19□□□□□ -1.9
LCB4YOR171C ENT4Q07872 247 aa3.19□□□□□ -1.9
LCB4YOR171C YOL107WQ12239 342 aa3.19□□□□□ -1.9
LCB4YOR171C RAD61Q99359 647 aa3.19□□□□□ -1.9
LCB4YOR171C VPS63O13549 108 aa3.18□□□□□ -1.9
LCB4YOR171C CNE1P27825 502 aa3.18□□□□□ -1.9
LCB4YOR171C AFG1P32317 509 aa3.18□□□□□ -1.9
LCB4YOR171C ARO4P32449 370 aaKnown RBP3.18□□□□□ -1.9
LCB4YOR171C TAE1P38340 232 aa3.18□□□□□ -1.9
LCB4YOR171C SSO2P39926 295 aa3.18□□□□□ -1.9
LCB4YOR171C RGI2P40188 164 aa3.18□□□□□ -1.9
LCB4YOR171C MET28P40573 187 aa3.18□□□□□ -1.9
LCB4YOR171C OTU1P43558 301 aa3.18□□□□□ -1.9
LCB4YOR171C LOH1P47055 219 aa3.18□□□□□ -1.9
LCB4YOR171C EFM3P47163 339 aa3.18□□□□□ -1.9
LCB4YOR171C SPC98P53540 846 aa3.18□□□□□ -1.9
LCB4YOR171C BUD17P53727 317 aa3.18□□□□□ -1.9
LCB4YOR171C RHO5P53879 331 aaKnown RBP3.18□□□□□ -1.9
LCB4YOR171C YNL143CP53908 130 aa3.18□□□□□ -1.9
LCB4YOR171C BET4Q00618 327 aa3.18□□□□□ -1.9
LCB4YOR171C PPM1Q04081 328 aa3.18□□□□□ -1.9
LCB4YOR171C ARP10Q04549 284 aa3.18□□□□□ -1.9
LCB4YOR171C ORM2Q06144 216 aa3.18□□□□□ -1.9
LCB4YOR171C SEC10Q06245 871 aa3.18□□□□□ -1.9
LCB4YOR171C YLL007CQ07799 665 aa3.18□□□□□ -1.9
LCB4YOR171C GSH2Q08220 491 aa3.18□□□□□ -1.9
LCB4YOR171C ICL2Q12031 575 aa3.18□□□□□ -1.9
LCB4YOR171C ATG29Q12092 213 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms