RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSH1	YOL054W	YMR209C	Q03648	457 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	YDR179W-A	Q03983	463 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	YLR455W	Q06188	304 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	PSR1	Q07800	427 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	ENB1	Q08299	606 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	MSH5	Q12175	901 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	HOS1	Q12214	470 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	POM34	Q12445	299 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	ADF1	Q2V2Q1	113 aa		5.62	□□□□□ -1.51
PSH1	YOL054W	CAR1	P00812	333 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	TUB1	P09733	447 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	GAS1	P22146	559 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	AMD2	P22580	549 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	DPB2	P24482	689 aa	Predicted RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	GFD2	P25370	566 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	GID7	P25569	745 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	KES1	P35844	434 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	RRN3	P36070	627 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	DBP7	P36120	742 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	PDX3	P38075	228 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	SLM4	P38247	162 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	YHR054C	P38780	354 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	AIM18	P38884	321 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	NUP60	P39705	539 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	FAF1	P40546	346 aa	Predicted RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	ERR3	P42222	437 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	TRF5	P48561	642 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	YVH1	Q02256	364 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	ELP3	Q02908	557 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	SLD5	Q03406	294 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	SPC2	Q04969	178 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	TMA10	Q06177	86 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	ATG26	Q06321	1198 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	DIS3	Q08162	1001 aa	Known RBP	5.61	□□□□□ -1.51
PSH1	YOL054W	IES3	Q12345	250 aa		5.61	□□□□□ -1.51
PSH1	YOL054W	ECM29	P38737	1868 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	PHO5	P00635	467 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	MET3	P08536	511 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	HMG2	P12684	1045 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	VPS34	P22543	875 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	CWH43	P25618	953 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	PMI40	P29952	429 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	PRE4	P30657	266 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	ZIP1	P31111	875 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	FRE1	P32791	686 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	UTP9	P38882	575 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	FMP32	P43557	207 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	YJR054W	P47114	497 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	AMA1	P50082	593 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	PEF1	P53238	335 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	DCP2	P53550	970 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	RNY1	Q02933	434 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	SRL4	Q03085	281 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	SVL3	Q03088	825 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	MZM1	Q03429	123 aa	Predicted RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	YMR160W	Q03823	816 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	YET2	Q04210	160 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	ASA1	Q06822	443 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	YDL073W	Q07454	984 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	AAD15	Q08361	143 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	NRT1	Q08485	598 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	VPS54	Q12071	889 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	RTK1	Q12100	620 aa	Predicted RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	DBP10	Q12389	995 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	HRP1	Q99383	534 aa	Known RBP	5.6	□□□□□ -1.51
PSH1	YOL054W	AI5_ALPHA	Q9ZZX1	630 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	YPR117W	Q06116	2489 aa		5.6	□□□□□ -1.51
PSH1	YOL054W	RHO2	P06781	192 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	CHS1	P08004	1131 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	RPL4A	P10664	362 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	LAT1	P12695	482 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	HSC82	P15108	705 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	CNA1	P23287	553 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	ERG6	P25087	383 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	HXT3	P32466	567 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	AEP1	P32493	518 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SMI1	P32566	505 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SEC66	P33754	206 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	PEX5	P35056	612 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SRL3	P36167	246 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SHM2	P37291	469 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	ATG12	P38316	186 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	ARN1	P38731	627 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	YLF2	P38746	405 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SEC31	P38968	1273 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	RPT2	P40327	437 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	AIM20	P40451	204 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	SEC28	P40509	296 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	PRM2	P40534	656 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	IMA5	P40884	581 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	MAD2	P40958	196 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	YFL012W	P43580	148 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	ASG7	P46993	209 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	YJL132W	P47014	750 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	RPS7B	P48164	190 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	RPL4B	P49626	362 aa	Known RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	BUD32	P53323	261 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	YNR071C	P53757	342 aa		5.59	□□□□□ -1.51
PSH1	YOL054W	CUS2	P53830	285 aa	Predicted RBP	5.59	□□□□□ -1.51
PSH1	YOL054W	RAD30	Q04049	632 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms