RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C RAD52P06778 471 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C DFR1P07807 211 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
RPB11YOL005C YML002WP0CF17 737 aa2.47□□□□□ -2.01
RPB11YOL005C SGV1P23293 657 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C SEC1P30619 724 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C PTR2P32901 601 aa2.47□□□□□ -2.01
RPB11YOL005C WBP1P33767 430 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C FMP46P36141 133 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C OSH3P38713 996 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C VPS52P39904 641 aa2.47□□□□□ -2.01
RPB11YOL005C YEL057CP39983 233 aa2.47□□□□□ -2.01
RPB11YOL005C YJL070CP40361 888 aa2.47□□□□□ -2.01
RPB11YOL005C DIM1P41819 318 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C ALK1P43633 760 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C ZPR1P53303 486 aaKnown RBP2.47□□□□□ -2.01
RPB11YOL005C YMR087WQ04299 284 aa2.47□□□□□ -2.01
RPB11YOL005C YMR317WQ04893 1140 aa2.47□□□□□ -2.01
RPB11YOL005C IVY1Q04934 453 aa2.47□□□□□ -2.01
RPB11YOL005C THI20Q08224 551 aa2.47□□□□□ -2.01
RPB11YOL005C DAP1Q12091 152 aa2.47□□□□□ -2.01
RPB11YOL005C MES1P00958 751 aaKnown RBP2.46□□□□□ -2.02
RPB11YOL005C MET17P06106 444 aa2.46□□□□□ -2.02
RPB11YOL005C COR1P07256 457 aa2.46□□□□□ -2.02
RPB11YOL005C PEP4P07267 405 aaKnown RBP2.46□□□□□ -2.02
RPB11YOL005C PMS1P14242 873 aa2.46□□□□□ -2.02
RPB11YOL005C CDC23P16522 626 aa2.46□□□□□ -2.02
RPB11YOL005C GPI10P30777 616 aa2.46□□□□□ -2.02
RPB11YOL005C YHR210CP38893 341 aa2.46□□□□□ -2.02
RPB11YOL005C POP1P41812 875 aa2.46□□□□□ -2.02
RPB11YOL005C SCD6P45978 349 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
RPB11YOL005C ALT2P52892 507 aa2.46□□□□□ -2.02
RPB11YOL005C MRPL19P53875 158 aa2.46□□□□□ -2.02
RPB11YOL005C RLI1Q03195 608 aaKnown RBP2.46□□□□□ -2.02
RPB11YOL005C FIN1Q03898 291 aa2.46□□□□□ -2.02
RPB11YOL005C PDS5Q04264 1277 aa2.46□□□□□ -2.02
RPB11YOL005C IMH1Q06704 911 aaKnown RBP2.46□□□□□ -2.02
RPB11YOL005C RIM20Q12033 661 aa2.46□□□□□ -2.02
RPB11YOL005C NCE102Q12207 173 aaRIP-Chip data2.46□□□□□ -2.02not detected
RPB11YOL005C RAV1P47104 1357 aa2.46□□□□□ -2.02
RPB11YOL005C MTF1P14908 341 aaKnown RBP2.45□□□□□ -2.02
RPB11YOL005C FRE1P32791 686 aa2.45□□□□□ -2.02
RPB11YOL005C SIP2P34164 415 aaKnown RBP2.45□□□□□ -2.02
RPB11YOL005C TCM62P38228 572 aaKnown RBP2.45□□□□□ -2.02
RPB11YOL005C TIF4631P39935 952 aaKnown RBP2.45□□□□□ -2.02
RPB11YOL005C YTA12P40341 825 aa2.45□□□□□ -2.02
RPB11YOL005C CSM2P40465 213 aa2.45□□□□□ -2.02
RPB11YOL005C MET28P40573 187 aa2.45□□□□□ -2.02
RPB11YOL005C AIM22P47051 409 aa2.45□□□□□ -2.02
RPB11YOL005C YJR154WP47181 346 aa2.45□□□□□ -2.02
RPB11YOL005C MDM1Q01846 1127 aa2.45□□□□□ -2.02
RPB11YOL005C SLD5Q03406 294 aa2.45□□□□□ -2.02
RPB11YOL005C PHO92Q06390 306 aa2.45□□□□□ -2.02
RPB11YOL005C YOR365CQ08844 703 aa2.45□□□□□ -2.02
RPB11YOL005C HSC82P15108 705 aaKnown RBP2.44□□□□□ -2.02
RPB11YOL005C ELO2P25358 347 aa2.44□□□□□ -2.02
RPB11YOL005C YUR1P26725 428 aa2.44□□□□□ -2.02
RPB11YOL005C BUD14P27637 709 aa2.44□□□□□ -2.02
RPB11YOL005C NDC1P32500 655 aa2.44□□□□□ -2.02
RPB11YOL005C MSN2P33748 704 aa2.44□□□□□ -2.02
RPB11YOL005C PMT1P33775 817 aa2.44□□□□□ -2.02
RPB11YOL005C VID24P38263 362 aa2.44□□□□□ -2.02
RPB11YOL005C MBB1P39534 108 aa2.44□□□□□ -2.02
RPB11YOL005C ESL1P40456 1118 aa2.44□□□□□ -2.02
RPB11YOL005C DRN1P53255 507 aaKnown RBP2.44□□□□□ -2.02
RPB11YOL005C GPI1P53306 609 aa2.44□□□□□ -2.02
RPB11YOL005C HEF3P53978 1044 aaKnown RBP2.44□□□□□ -2.02
RPB11YOL005C MRPL51Q06090 140 aaPredicted RBP2.44□□□□□ -2.02
RPB11YOL005C ATG29Q12092 213 aa2.44□□□□□ -2.02
RPB11YOL005C SET6Q12529 373 aa2.44□□□□□ -2.02
RPB11YOL005C YDL007C-AQ2V2Q0 85 aa2.44□□□□□ -2.02
RPB11YOL005C RPL31BP0C2H9 113 aaKnown RBP2.43□□□□□ -2.02
RPB11YOL005C MRS3P10566 314 aa2.43□□□□□ -2.02
RPB11YOL005C RPL3P14126 387 aaKnown RBP2.43□□□□□ -2.02
RPB11YOL005C CKA1P15790 372 aa2.43□□□□□ -2.02
RPB11YOL005C EXO70P19658 623 aa2.43□□□□□ -2.02
RPB11YOL005C PRP2P20095 876 aaPredicted RBP2.43□□□□□ -2.02
RPB11YOL005C PRD1P25375 712 aa2.43□□□□□ -2.02
RPB11YOL005C IDH2P28241 369 aaKnown RBP2.43□□□□□ -2.02
RPB11YOL005C ATS1P31386 333 aa2.43□□□□□ -2.02
RPB11YOL005C CMC1P36064 111 aa2.43□□□□□ -2.02
RPB11YOL005C JNM1P36224 373 aa2.43□□□□□ -2.02
RPB11YOL005C CBP4P37267 147 aa2.43□□□□□ -2.02
RPB11YOL005C DUG2P38149 878 aa2.43□□□□□ -2.02
RPB11YOL005C ELP2P42935 788 aa2.43□□□□□ -2.02
RPB11YOL005C RTT101P47050 842 aa2.43□□□□□ -2.02
RPB11YOL005C OCA1P50946 238 aaPredicted RBP2.43□□□□□ -2.02
RPB11YOL005C TWF1P53250 332 aa2.43□□□□□ -2.02
RPB11YOL005C IRC15Q02733 499 aa2.43□□□□□ -2.02
RPB11YOL005C MRD1Q06106 887 aaKnown RBP2.43□□□□□ -2.02
RPB11YOL005C YDL009CQ12210 107 aa2.43□□□□□ -2.02
RPB11YOL005C LSP1Q12230 341 aaKnown RBP2.43□□□□□ -2.02
RPB11YOL005C KOG1P38873 1557 aa2.42□□□□□ -2.02
RPB11YOL005C CYB2P00175 591 aa2.42□□□□□ -2.02
RPB11YOL005C RPL20AP0CX23 172 aaKnown RBP2.42□□□□□ -2.02
RPB11YOL005C RPL20BP0CX24 172 aaPredicted RBP2.42□□□□□ -2.02
RPB11YOL005C RED1P14291 827 aa2.42□□□□□ -2.02
RPB11YOL005C AFG1P32317 509 aa2.42□□□□□ -2.02
RPB11YOL005C UTR4P32626 227 aa2.42□□□□□ -2.02
RPB11YOL005C MRE11P32829 692 aa2.42□□□□□ -2.02
RPB11YOL005C RSM22P36056 628 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms