RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	CIK1	Q01649	594 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	RCR2	Q03446	210 aa	Known RBP	4.24	□□□□□ -1.73
TRF5	YNL299W	ECM7	Q06200	448 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	ARR1	Q06596	294 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	ENT4	Q07872	247 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	THI20	Q08224	551 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	IMA2	Q08295	589 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	YDR056C	Q12025	205 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	DIN7	Q12086	430 aa		4.24	□□□□□ -1.73
TRF5	YNL299W	STE2	D6VTK4	431 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	CYC1	P00044	109 aa	Predicted RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	ITR2	P30606	609 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	YPT7	P32939	208 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	KAE1	P36132	386 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	VMA22	P38784	181 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SEC31	P38968	1273 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	SWP82	P43554	623 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	ZAP1	P47043	880 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	BNA1	P47096	177 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	MNP1	P53163	194 aa	Predicted RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	CUL3	P53202	744 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	VPS62	P53285	467 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	MEP3	P53390	489 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	RCF2	P53721	224 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	TPO1	Q07824	586 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	CUE5	Q08412	411 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	KCS1	Q12494	1050 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	GPA2	P10823	449 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	GCN3	P14741	305 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	MSS51	P32335	436 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	PAH1	P32567	862 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SDS22	P36047	338 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	APM3	P38153	483 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	PZF1	P39933	429 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	AST2	P39945	430 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	AVT6	P40074	448 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SNZ3	P43545	298 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	ARC1	P46672	376 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	ASN1	P49089	572 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	EXG2	P52911	562 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SNZ2	P53824	298 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	REX2	P54964	269 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	FMP30	Q02883	468 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SRL4	Q03085	281 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	PLB2	Q03674	706 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	YMR160W	Q03823	816 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	DYN3	Q04949	312 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	YMR226C	Q05016	267 aa	Known RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	GLO2	Q05584	274 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	SEC10	Q06245	871 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	YDL114W	Q07530	308 aa		4.23	□□□□□ -1.73
TRF5	YNL299W	BRR1	Q99177	341 aa	Predicted RBP	4.23	□□□□□ -1.73
TRF5	YNL299W	CAR1	P00812	333 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	WHI2	P12611	486 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	NCP1	P16603	691 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	CAD1	P24813	409 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	HXT3	P32466	567 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	SWC5	P38326	303 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	MSS4	P38994	779 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	DUN1	P39009	513 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	SEO1	P39709	593 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	VHR1	P40522	640 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	MNT2	P53059	558 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	ORC3	P54790	616 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	ARG5,6	Q01217	863 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	ELP3	Q02908	557 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	ERB1	Q04660	807 aa	Known RBP	4.22	□□□□□ -1.73
TRF5	YNL299W	PSY3	Q12318	242 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	LDB17	Q12342	491 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	GIS3	Q12418	502 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	RGS2	Q99188	309 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	LAA1	P39526	2014 aa		4.22	□□□□□ -1.73
TRF5	YNL299W	COX4	P04037	155 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	RHO1	P06780	209 aa	Known RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	UBA1	P22515	1024 aa	Known RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	NGG1	P32494	702 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	MTC7	P32633	139 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	NTR2	P36118	322 aa	Predicted RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	YBR139W	P38109	508 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	VID24	P38263	362 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	TDP1	P38319	544 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	GOS1	P38736	223 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	ECM10	P39987	644 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	YRB2	P40517	327 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	BUD8	P41698	603 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	ASG7	P46993	209 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	YJL055W	P47044	245 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	TRF5	P48561	642 aa	Known RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	AZR1	P50080	613 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	GET1	P53192	235 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	SLU7	Q02775	382 aa	Known RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	YMR099C	Q03161	297 aa	Known RBP	4.21	□□□□□ -1.74
TRF5	YNL299W	ARP9	Q05123	467 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	COA4	Q05809	96 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	VAM6	Q07468	1049 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	LOT6	Q07923	191 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	SGO1	Q08490	590 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	UIP4	Q08926	304 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	EMP46	Q12396	444 aa		4.21	□□□□□ -1.74
TRF5	YNL299W	YMR030W-A	Q3E760	96 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms