RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W THI20Q08224 551 aa3.27□□□□□ -1.89
SRP1YNL189W RIM20Q12033 661 aa3.27□□□□□ -1.89
SRP1YNL189W RTN2Q12443 393 aa3.27□□□□□ -1.89
SRP1YNL189W COR1P07256 457 aa3.26□□□□□ -1.89
SRP1YNL189W CDC23P16522 626 aa3.26□□□□□ -1.89
SRP1YNL189W SHP1P34223 423 aa3.26□□□□□ -1.89
SRP1YNL189W MUM2P38236 366 aa3.26□□□□□ -1.89
SRP1YNL189W SMF1P38925 575 aa3.26□□□□□ -1.89
SRP1YNL189W STB2P46679 850 aa3.26□□□□□ -1.89
SRP1YNL189W FIN1Q03898 291 aa3.26□□□□□ -1.89
SRP1YNL189W PDS5Q04264 1277 aa3.26□□□□□ -1.89
SRP1YNL189W YLR287CQ05881 355 aa3.26□□□□□ -1.89
SRP1YNL189W ATG29Q12092 213 aa3.26□□□□□ -1.89
SRP1YNL189W YDL007C-AQ2V2Q0 85 aa3.26□□□□□ -1.89
SRP1YNL189W SUC2P00724 532 aa3.26□□□□□ -1.89
SRP1YNL189W TYR1P20049 452 aa3.26□□□□□ -1.89
SRP1YNL189W PRP2P20095 876 aaPredicted RBP3.26□□□□□ -1.89
SRP1YNL189W TRS65P32893 560 aa3.26□□□□□ -1.89
SRP1YNL189W SAS3P34218 831 aa3.26□□□□□ -1.89
SRP1YNL189W MPE1P35728 441 aaKnown RBP3.26□□□□□ -1.89
SRP1YNL189W MBB1P39534 108 aa3.26□□□□□ -1.89
SRP1YNL189W VPS52P39904 641 aa3.26□□□□□ -1.89
SRP1YNL189W YIR014WP40570 242 aa3.26□□□□□ -1.89
SRP1YNL189W TWF1P53250 332 aa3.26□□□□□ -1.89
SRP1YNL189W ZPR1P53303 486 aaKnown RBP3.26□□□□□ -1.89
SRP1YNL189W HEF3P53978 1044 aaKnown RBP3.26□□□□□ -1.89
SRP1YNL189W NUP53Q03790 475 aa3.26□□□□□ -1.89
SRP1YNL189W YMR155WQ03795 547 aa3.26□□□□□ -1.89
SRP1YNL189W TAP42Q04372 366 aa3.26□□□□□ -1.89
SRP1YNL189W RBS1Q05672 457 aaKnown RBP3.26□□□□□ -1.89
SRP1YNL189W RRG1Q12167 365 aaPredicted RBP3.26□□□□□ -1.89
SRP1YNL189W RPL31BP0C2H9 113 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W MRS3P10566 314 aa3.25□□□□□ -1.89
SRP1YNL189W APE1P14904 514 aa3.25□□□□□ -1.89
SRP1YNL189W ATS1P31386 333 aa3.25□□□□□ -1.89
SRP1YNL189W RPN2P32565 945 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W ECM15P35195 104 aa3.25□□□□□ -1.89
SRP1YNL189W JNM1P36224 373 aa3.25□□□□□ -1.89
SRP1YNL189W DUG2P38149 878 aa3.25□□□□□ -1.89
SRP1YNL189W BNA4P38169 460 aa3.25□□□□□ -1.89
SRP1YNL189W OSH3P38713 996 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W NOC2P39744 710 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W YMR147WP40218 223 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W SCD6P45978 349 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SRP1YNL189W YJR154WP47181 346 aa3.25□□□□□ -1.89
SRP1YNL189W SRB7P47822 140 aa3.25□□□□□ -1.89
SRP1YNL189W RLI1Q03195 608 aaKnown RBP3.25□□□□□ -1.89
SRP1YNL189W SLD5Q03406 294 aa3.25□□□□□ -1.89
SRP1YNL189W GLO2Q05584 274 aa3.25□□□□□ -1.89
SRP1YNL189W NRT1Q08485 598 aa3.25□□□□□ -1.89
SRP1YNL189W RKM5Q12367 367 aa3.25□□□□□ -1.89
SRP1YNL189W ARP6Q12509 438 aa3.25□□□□□ -1.89
SRP1YNL189W SEC39Q12745 709 aa3.25□□□□□ -1.89
SRP1YNL189W YML133CQ03099 1374 aa3.24□□□□□ -1.89
SRP1YNL189W YLL067CQ07888 1374 aa3.24□□□□□ -1.89
SRP1YNL189W YLL066CQ99208 1374 aa3.24□□□□□ -1.89
SRP1YNL189W MES1P00958 751 aaKnown RBP3.24□□□□□ -1.89
SRP1YNL189W SEC62P21825 274 aa3.24□□□□□ -1.89
SRP1YNL189W CMC1P36064 111 aa3.24□□□□□ -1.89
SRP1YNL189W GPD2P41911 440 aaKnown RBP3.24□□□□□ -1.89
SRP1YNL189W SAD1P43589 448 aa3.24□□□□□ -1.89
SRP1YNL189W ALK1P43633 760 aaKnown RBP3.24□□□□□ -1.89
SRP1YNL189W SLG1P54867 378 aa3.24□□□□□ -1.89
SRP1YNL189W PHO92Q06390 306 aa3.24□□□□□ -1.89
SRP1YNL189W RRD2Q12461 358 aa3.24□□□□□ -1.89
SRP1YNL189W SUI2P20459 304 aaKnown RBP3.23□□□□□ -1.89
SRP1YNL189W ATP11P32453 318 aa3.23□□□□□ -1.89
SRP1YNL189W FRE1P32791 686 aa3.23□□□□□ -1.89
SRP1YNL189W MIC60P36112 540 aa3.23□□□□□ -1.89
SRP1YNL189W RIM2P38127 377 aa3.23□□□□□ -1.89
SRP1YNL189W LSM5P40089 93 aaKnown RBP3.23□□□□□ -1.89
SRP1YNL189W HXT14P42833 540 aa3.23□□□□□ -1.89
SRP1YNL189W NDD1Q08887 554 aa3.23□□□□□ -1.89
SRP1YNL189W FUR1P18562 216 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W PPH22P23595 377 aa3.22□□□□□ -1.89
SRP1YNL189W YCR022CP25620 114 aa3.22□□□□□ -1.89
SRP1YNL189W BUD14P27637 709 aa3.22□□□□□ -1.89
SRP1YNL189W PAP1P29468 568 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W HXT3P32466 567 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W VPS17P32913 551 aa3.22□□□□□ -1.89
SRP1YNL189W SEC66P33754 206 aa3.22□□□□□ -1.89
SRP1YNL189W SIP2P34164 415 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W RKM3P38222 552 aa3.22□□□□□ -1.89
SRP1YNL189W BZZ1P38822 633 aa3.22□□□□□ -1.89
SRP1YNL189W UTP9P38882 575 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W YJL068CP40363 299 aa3.22□□□□□ -1.89
SRP1YNL189W VMA13P41807 478 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W ALT2P52892 507 aa3.22□□□□□ -1.89
SRP1YNL189W RPA49Q01080 415 aaPredicted RBP3.22□□□□□ -1.89
SRP1YNL189W RQC1Q05468 723 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W SCM3Q12334 223 aa3.22□□□□□ -1.89
SRP1YNL189W RPL3P14126 387 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W AMD1P15274 810 aaKnown RBP3.22□□□□□ -1.89
SRP1YNL189W SYG1P40528 902 aa3.22□□□□□ -1.89
SRP1YNL189W IKS1P47042 667 aa3.22□□□□□ -1.89
SRP1YNL189W YGL108CP53139 140 aa3.22□□□□□ -1.89
SRP1YNL189W IVY1Q04934 453 aa3.22□□□□□ -1.89
SRP1YNL189W YLR281CQ05863 155 aa3.22□□□□□ -1.89
SRP1YNL189W SYO1Q07395 620 aa3.22□□□□□ -1.89
SRP1YNL189W DAP1Q12091 152 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms