RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C FAR3P46671 204 aa3.06□□□□□ -1.92
VPS20YMR077C PIR3Q03180 325 aa3.06□□□□□ -1.92
VPS20YMR077C YOR365CQ08844 703 aa3.06□□□□□ -1.92
VPS20YMR077C CPR4P25334 318 aa3.05□□□□□ -1.92
VPS20YMR077C CDC60P26637 1090 aaKnown RBP3.05□□□□□ -1.92
VPS20YMR077C MRP20P32387 263 aa3.05□□□□□ -1.92
VPS20YMR077C NUP133P36161 1157 aa3.05□□□□□ -1.92
VPS20YMR077C MRP21P38175 177 aa3.05□□□□□ -1.92
VPS20YMR077C EFM6P53970 246 aa3.05□□□□□ -1.92
VPS20YMR077C NCE102Q12207 173 aaRIP-Chip data3.05□□□□□ -1.92not detected
VPS20YMR077C WTM1Q12363 437 aaKnown RBP3.05□□□□□ -1.92
VPS20YMR077C SUC2P00724 532 aa3.04□□□□□ -1.92
VPS20YMR077C PUP3P25451 205 aaKnown RBP3.04□□□□□ -1.92
VPS20YMR077C SYN8P31377 255 aa3.04□□□□□ -1.92
VPS20YMR077C MID2P36027 376 aa3.04□□□□□ -1.92
VPS20YMR077C RPL32P38061 130 aaKnown RBP3.04□□□□□ -1.92
VPS20YMR077C AAD10P47182 288 aa3.04□□□□□ -1.92
VPS20YMR077C RRT6P53117 311 aaPredicted RBP3.04□□□□□ -1.92
VPS20YMR077C TSR1Q07381 788 aaKnown RBP3.04□□□□□ -1.92
VPS20YMR077C NBP2Q12163 236 aa3.04□□□□□ -1.92
VPS20YMR077C NYV1Q12255 253 aa3.04□□□□□ -1.92
VPS20YMR077C CHS1P08004 1131 aa3.03□□□□□ -1.92
VPS20YMR077C GPI1P53306 609 aa3.03□□□□□ -1.92
VPS20YMR077C HAL1Q01766 294 aa3.03□□□□□ -1.92
VPS20YMR077C TSA2Q04120 196 aa3.03□□□□□ -1.92
VPS20YMR077C YEF3P16521 1044 aaKnown RBP3.02□□□□□ -1.93
VPS20YMR077C PET123P17558 318 aa3.02□□□□□ -1.93
VPS20YMR077C UTH1P36135 365 aa3.02□□□□□ -1.93
VPS20YMR077C NAT2P37293 288 aa3.02□□□□□ -1.93
VPS20YMR077C IBD2P53892 351 aa3.02□□□□□ -1.93
VPS20YMR077C MSC1Q03104 513 aa3.02□□□□□ -1.93
VPS20YMR077C PHO92Q06390 306 aa3.02□□□□□ -1.93
VPS20YMR077C YLR108CQ12259 485 aa3.02□□□□□ -1.93
VPS20YMR077C RAD52P06778 471 aaKnown RBP3.01□□□□□ -1.93
VPS20YMR077C IMG1P25626 169 aa3.01□□□□□ -1.93
VPS20YMR077C PIM1P36775 1133 aa3.01□□□□□ -1.93
VPS20YMR077C CIN4P39110 191 aa3.01□□□□□ -1.93
VPS20YMR077C TOF1P53840 1238 aa3.01□□□□□ -1.93
VPS20YMR077C YDL057WQ07379 328 aa3.01□□□□□ -1.93
VPS20YMR077C TRM8Q12009 286 aa3.01□□□□□ -1.93
VPS20YMR077C THP3Q12049 470 aaKnown RBP3.01□□□□□ -1.93
VPS20YMR077C CRM1P30822 1084 aaKnown RBP3□□□□□ -1.93
VPS20YMR077C APT1P49435 187 aaKnown RBP3□□□□□ -1.93
VPS20YMR077C DRN1P53255 507 aaKnown RBP3□□□□□ -1.93
VPS20YMR077C HRI1Q05905 244 aaKnown RBP3□□□□□ -1.93
VPS20YMR077C TCO89Q08921 799 aa3□□□□□ -1.93
VPS20YMR077C PCL1P24867 279 aa2.99□□□□□ -1.93
VPS20YMR077C PAH1P32567 862 aa2.99□□□□□ -1.93
VPS20YMR077C FAU1P40099 211 aa2.99□□□□□ -1.93
VPS20YMR077C BSC5P53755 489 aa2.99□□□□□ -1.93
VPS20YMR077C RSN1Q03516 953 aa2.99□□□□□ -1.93
VPS20YMR077C KGD1P20967 1014 aaKnown RBP2.98□□□□□ -1.93
VPS20YMR077C NDI1P32340 513 aa2.98□□□□□ -1.93
VPS20YMR077C RBS1Q05672 457 aaKnown RBP2.98□□□□□ -1.93
VPS20YMR077C RIX7Q07844 837 aaKnown RBP2.98□□□□□ -1.93
VPS20YMR077C DAL2P25335 343 aa2.97□□□□□ -1.93
VPS20YMR077C MDG1P53885 366 aa2.97□□□□□ -1.93
VPS20YMR077C PEX25Q02969 394 aa2.97□□□□□ -1.93
VPS20YMR077C VID22Q05934 901 aa2.97□□□□□ -1.93
VPS20YMR077C SNF1P06782 633 aaKnown RBP2.96□□□□□ -1.94
VPS20YMR077C APA1P16550 321 aaKnown RBP2.96□□□□□ -1.94
VPS20YMR077C SSE2P32590 693 aaKnown RBP2.96□□□□□ -1.94
VPS20YMR077C YBR144CP34215 104 aa2.96□□□□□ -1.94
VPS20YMR077C RSM22P36056 628 aa2.96□□□□□ -1.94
VPS20YMR077C DUG2P38149 878 aa2.96□□□□□ -1.94
VPS20YMR077C PAN6P40459 309 aa2.96□□□□□ -1.94
VPS20YMR077C WWM1P43582 211 aaKnown RBP2.96□□□□□ -1.94
VPS20YMR077C AVT4P50944 713 aa2.96□□□□□ -1.94
VPS20YMR077C CFT2Q12102 859 aaPredicted RBP2.96□□□□□ -1.94
VPS20YMR077C HSH49Q99181 213 aaPredicted RBP2.96□□□□□ -1.94
VPS20YMR077C MF(ALPHA)1P01149 165 aa2.95□□□□□ -1.94
VPS20YMR077C PEP4P07267 405 aaKnown RBP2.95□□□□□ -1.94
VPS20YMR077C GLK1P17709 500 aaKnown RBP2.95□□□□□ -1.94
VPS20YMR077C SHP1P34223 423 aa2.95□□□□□ -1.94
VPS20YMR077C GCD10P41814 478 aa2.95□□□□□ -1.94
VPS20YMR077C RRT5P43607 289 aa2.95□□□□□ -1.94
VPS20YMR077C ALK1P43633 760 aaKnown RBP2.95□□□□□ -1.94
VPS20YMR077C BNA1P47096 177 aa2.95□□□□□ -1.94
VPS20YMR077C HSP26P15992 214 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
VPS20YMR077C GLC7P32598 312 aaKnown RBP2.94□□□□□ -1.94
VPS20YMR077C MFT1P33441 392 aaKnown RBP2.94□□□□□ -1.94
VPS20YMR077C OGG1P53397 376 aaPredicted RBP2.94□□□□□ -1.94
VPS20YMR077C UBX4P54730 416 aa2.94□□□□□ -1.94
VPS20YMR077C YOL087CQ99247 1116 aa2.94□□□□□ -1.94
VPS20YMR077C FRE2P36033 711 aa2.93□□□□□ -1.94
VPS20YMR077C BNA4P38169 460 aa2.93□□□□□ -1.94
VPS20YMR077C ART5P53244 586 aaKnown RBP2.93□□□□□ -1.94
VPS20YMR077C THP1Q08231 455 aa2.93□□□□□ -1.94
VPS20YMR077C KEL3Q08979 651 aaPredicted RBP2.93□□□□□ -1.94
VPS20YMR077C STB6P36085 766 aa2.92□□□□□ -1.94
VPS20YMR077C MIX23P38162 196 aa2.92□□□□□ -1.94
VPS20YMR077C TIF4631P39935 952 aaKnown RBP2.92□□□□□ -1.94
VPS20YMR077C YER010CP40011 234 aa2.92□□□□□ -1.94
VPS20YMR077C LYS4P49367 693 aaPredicted RBP2.92□□□□□ -1.94
VPS20YMR077C GOR1P53839 350 aa2.92□□□□□ -1.94
VPS20YMR077C HER2Q03557 464 aa2.92□□□□□ -1.94
VPS20YMR077C LUC7Q07508 261 aaPredicted RBP2.92□□□□□ -1.94
VPS20YMR077C SSM4P40318 1319 aa2.92□□□□□ -1.94
VPS20YMR077C ARD1P07347 238 aaPredicted RBP2.91□□□□□ -1.94
VPS20YMR077C PRE8P23639 250 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms