RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C EFM6P53970 246 aa4.8□□□□□ -1.64
NUP116YMR047C MPS1P54199 764 aa4.8□□□□□ -1.64
NUP116YMR047C RSC4Q02206 625 aa4.8□□□□□ -1.64
NUP116YMR047C YMR160WQ03823 816 aa4.8□□□□□ -1.64
NUP116YMR047C CIA1Q05583 330 aa4.8□□□□□ -1.64
NUP116YMR047C DTD1Q07648 150 aaKnown RBP4.8□□□□□ -1.64
NUP116YMR047C YOR012WQ12351 137 aa4.8□□□□□ -1.64
NUP116YMR047C YLR462WO13556 202 aa4.79□□□□□ -1.64
NUP116YMR047C ACO1P19414 778 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
NUP116YMR047C CNA1P23287 553 aa4.79□□□□□ -1.64
NUP116YMR047C BUD23P25627 275 aaPredicted RBP4.79□□□□□ -1.64
NUP116YMR047C AEP1P32493 518 aa4.79□□□□□ -1.64
NUP116YMR047C RRT2P38332 387 aa4.79□□□□□ -1.64
NUP116YMR047C YHL049CP38722 271 aa4.79□□□□□ -1.64
NUP116YMR047C LIN1P38852 340 aaPredicted RBP4.79□□□□□ -1.64
NUP116YMR047C YAL037WP39728 267 aa4.79□□□□□ -1.64
NUP116YMR047C YAT2P40017 923 aa4.79□□□□□ -1.64
NUP116YMR047C JLP2P40206 208 aa4.79□□□□□ -1.64
NUP116YMR047C YFL064CP43540 174 aa4.79□□□□□ -1.64
NUP116YMR047C GUS1P46655 708 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
NUP116YMR047C ARH1P48360 493 aa4.79□□□□□ -1.64
NUP116YMR047C COG1P53079 417 aa4.79□□□□□ -1.64
NUP116YMR047C SWC4P53201 476 aa4.79□□□□□ -1.64
NUP116YMR047C YGR250CP53316 781 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C YMR178WQ03219 274 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C MLC2Q06580 163 aa4.79□□□□□ -1.64
NUP116YMR047C PLB3Q08108 686 aa4.79□□□□□ -1.64
NUP116YMR047C PEX15Q08215 383 aa4.79□□□□□ -1.64
NUP116YMR047C SEY1Q99287 776 aa4.79□□□□□ -1.64
NUP116YMR047C AI5_ALPHAQ9ZZX1 630 aa4.79□□□□□ -1.64
NUP116YMR047C INO1P11986 533 aa4.79□□□□□ -1.64
NUP116YMR047C GCN3P14741 305 aa4.79□□□□□ -1.64
NUP116YMR047C CWH43P25618 953 aa4.79□□□□□ -1.64
NUP116YMR047C RML2P32611 393 aa4.79□□□□□ -1.64
NUP116YMR047C SSO1P32867 290 aa4.79□□□□□ -1.64
NUP116YMR047C SDS22P36047 338 aa4.79□□□□□ -1.64
NUP116YMR047C STB6P36085 766 aa4.79□□□□□ -1.64
NUP116YMR047C END3P39013 349 aa4.79□□□□□ -1.64
NUP116YMR047C KHA1P40309 873 aa4.79□□□□□ -1.64
NUP116YMR047C RHO3Q00245 231 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C INA17Q02888 182 aa4.79□□□□□ -1.64
NUP116YMR047C VID22Q05934 901 aa4.79□□□□□ -1.64
NUP116YMR047C GPN2Q08726 347 aaPredicted RBP4.79□□□□□ -1.64
NUP116YMR047C RSA1Q08932 381 aa4.79□□□□□ -1.64
NUP116YMR047C SCM3Q12334 223 aa4.79□□□□□ -1.64
NUP116YMR047C AFI1Q99222 893 aa4.79□□□□□ -1.64
NUP116YMR047C TDH1P00360 332 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C PRP4P20053 465 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C RFA2P26754 273 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C CIN8P27895 1000 aa4.79□□□□□ -1.64
NUP116YMR047C SPS19P32573 292 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C RRN3P36070 627 aa4.79□□□□□ -1.64
NUP116YMR047C FES1P38260 290 aa4.79□□□□□ -1.64
NUP116YMR047C UTP9P38882 575 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C AXL2P38928 823 aa4.79□□□□□ -1.64
NUP116YMR047C GIP4P39732 760 aa4.79□□□□□ -1.64
NUP116YMR047C ROK1P45818 564 aaPredicted RBP4.79□□□□□ -1.64
NUP116YMR047C RTA1P53047 317 aa4.79□□□□□ -1.64
NUP116YMR047C PEX8P53248 589 aa4.79□□□□□ -1.64
NUP116YMR047C NAM8Q00539 523 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C SPP2Q02521 185 aa4.79□□□□□ -1.64
NUP116YMR047C RVB1Q03940 463 aaKnown RBP4.79□□□□□ -1.64
NUP116YMR047C YLR352WQ06479 807 aa4.79□□□□□ -1.64
NUP116YMR047C THI73Q07904 523 aa4.79□□□□□ -1.64
NUP116YMR047C OSW1Q08692 278 aa4.79□□□□□ -1.64
NUP116YMR047C HMS1Q12398 434 aa4.79□□□□□ -1.64
NUP116YMR047C NAG1Q8TGN9 163 aa4.79□□□□□ -1.64
NUP116YMR047C Q0182Q9ZZW1 134 aa4.79□□□□□ -1.64
NUP116YMR047C MET3P08536 511 aa4.78□□□□□ -1.64
NUP116YMR047C SLY1P22213 666 aa4.78□□□□□ -1.64
NUP116YMR047C SFP1P32432 683 aa4.78□□□□□ -1.64
NUP116YMR047C VMA8P32610 256 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C GCG1P32656 232 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C CUE2P36075 443 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C MSG5P38590 489 aa4.78□□□□□ -1.64
NUP116YMR047C EMW1P42842 904 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C SMA1Q02651 245 aa4.78□□□□□ -1.64
NUP116YMR047C NOG1Q02892 647 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C YFT2Q06676 274 aa4.78□□□□□ -1.64
NUP116YMR047C ARG80P07249 177 aa4.78□□□□□ -1.64
NUP116YMR047C SWI5P08153 709 aa4.78□□□□□ -1.64
NUP116YMR047C HOP09932 586 aa4.78□□□□□ -1.64
NUP116YMR047C RAP1P11938 827 aa4.78□□□□□ -1.64
NUP116YMR047C MRPL33P20084 86 aa4.78□□□□□ -1.64
NUP116YMR047C PRP2P20095 876 aaPredicted RBP4.78□□□□□ -1.64
NUP116YMR047C PRP28P23394 588 aa4.78□□□□□ -1.64
NUP116YMR047C DPB2P24482 689 aaPredicted RBP4.78□□□□□ -1.64
NUP116YMR047C GUT2P32191 649 aa4.78□□□□□ -1.64
NUP116YMR047C ORC2P32833 620 aa4.78□□□□□ -1.64
NUP116YMR047C BMT2P38278 337 aa4.78□□□□□ -1.64
NUP116YMR047C LNP1P38878 278 aa4.78□□□□□ -1.64
NUP116YMR047C CKB2P38930 258 aa4.78□□□□□ -1.64
NUP116YMR047C CCT4P39078 528 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C AIM10P39965 576 aaKnown RBP4.78□□□□□ -1.64
NUP116YMR047C LCP5P40079 357 aaPredicted RBP4.78□□□□□ -1.64
NUP116YMR047C YJL107CP42947 387 aa4.78□□□□□ -1.64
NUP116YMR047C MIC19P43594 170 aa4.78□□□□□ -1.64
NUP116YMR047C MAL13P53338 473 aa4.78□□□□□ -1.64
NUP116YMR047C SPO20Q04359 397 aa4.78□□□□□ -1.64
NUP116YMR047C TDA9Q04545 1251 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms