RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W VPS38Q05919 439 aa3.38□□□□□ -1.87
VPS38YLR360W SYO1Q07395 620 aa3.38□□□□□ -1.87
VPS38YLR360W THP1Q08231 455 aa3.38□□□□□ -1.87
VPS38YLR360W YOR365CQ08844 703 aa3.38□□□□□ -1.87
VPS38YLR360W CTI6Q08923 506 aa3.38□□□□□ -1.87
VPS38YLR360W YJR112W-AQ3E743 109 aa3.38□□□□□ -1.87
VPS38YLR360W GAL80P04387 435 aa3.37□□□□□ -1.87
VPS38YLR360W CBS1P14066 229 aa3.37□□□□□ -1.87
VPS38YLR360W AGA1P32323 725 aa3.37□□□□□ -1.87
VPS38YLR360W SPC110P32380 944 aa3.37□□□□□ -1.87
VPS38YLR360W FRE1P32791 686 aa3.37□□□□□ -1.87
VPS38YLR360W YME1P32795 747 aa3.37□□□□□ -1.87
VPS38YLR360W SHP1P34223 423 aa3.37□□□□□ -1.87
VPS38YLR360W TCD2P36101 447 aaKnown RBP3.37□□□□□ -1.87
VPS38YLR360W ALK1P43633 760 aaKnown RBP3.37□□□□□ -1.87
VPS38YLR360W ROK1P45818 564 aaPredicted RBP3.37□□□□□ -1.87
VPS38YLR360W DRN1P53255 507 aaKnown RBP3.37□□□□□ -1.87
VPS38YLR360W IMP4P53941 290 aaKnown RBP3.37□□□□□ -1.87
VPS38YLR360W SLD5Q03406 294 aa3.37□□□□□ -1.87
VPS38YLR360W MRPL51Q06090 140 aaPredicted RBP3.37□□□□□ -1.87
VPS38YLR360W YDL009CQ12210 107 aa3.37□□□□□ -1.87
VPS38YLR360W RLM1Q12224 676 aa3.37□□□□□ -1.87
VPS38YLR360W AYT1Q12226 474 aa3.37□□□□□ -1.87
VPS38YLR360W RPL20AP0CX23 172 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W RPL20BP0CX24 172 aaPredicted RBP3.36□□□□□ -1.87
VPS38YLR360W AMD1P15274 810 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W MCK1P21965 375 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W CPR3P25719 182 aa3.36□□□□□ -1.87
VPS38YLR360W PAP1P29468 568 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W BNA4P38169 460 aa3.36□□□□□ -1.87
VPS38YLR360W TCM62P38228 572 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W DOT5P40553 215 aa3.36□□□□□ -1.87
VPS38YLR360W YDL186WP48568 277 aa3.36□□□□□ -1.87
VPS38YLR360W YGR066CP53242 292 aa3.36□□□□□ -1.87
VPS38YLR360W ERP1Q05359 219 aaKnown RBP3.36□□□□□ -1.87
VPS38YLR360W PHO92Q06390 306 aa3.36□□□□□ -1.87
VPS38YLR360W OLE1P21147 510 aaKnown RBP3.35□□□□□ -1.87
VPS38YLR360W ELO2P25358 347 aa3.35□□□□□ -1.87
VPS38YLR360W UTR4P32626 227 aa3.35□□□□□ -1.87
VPS38YLR360W LOS1P33418 1100 aaPredicted RBP3.35□□□□□ -1.87
VPS38YLR360W YHR218WP38899 603 aa3.35□□□□□ -1.87
VPS38YLR360W TIF4631P39935 952 aaKnown RBP3.35□□□□□ -1.87
VPS38YLR360W ZPR1P53303 486 aaKnown RBP3.35□□□□□ -1.87
VPS38YLR360W IRC15Q02733 499 aa3.35□□□□□ -1.87
VPS38YLR360W BNA5Q05979 453 aa3.35□□□□□ -1.87
VPS38YLR360W AVL9Q12500 764 aa3.35□□□□□ -1.87
VPS38YLR360W YCR007CP25354 239 aa3.34□□□□□ -1.87
VPS38YLR360W YCR022CP25620 114 aa3.34□□□□□ -1.87
VPS38YLR360W MSN2P33748 704 aa3.34□□□□□ -1.87
VPS38YLR360W DUG2P38149 878 aa3.34□□□□□ -1.87
VPS38YLR360W SRO77P38163 1010 aa3.34□□□□□ -1.87
VPS38YLR360W SHO1P40073 367 aa3.34□□□□□ -1.87
VPS38YLR360W RMD8P43620 662 aa3.34□□□□□ -1.87
VPS38YLR360W COS10P52924 374 aa3.34□□□□□ -1.87
VPS38YLR360W RPT6Q01939 405 aaKnown RBP3.34□□□□□ -1.87
VPS38YLR360W YDL121CQ07541 149 aa3.34□□□□□ -1.87
VPS38YLR360W LSP1Q12230 341 aaKnown RBP3.34□□□□□ -1.87
VPS38YLR360W SUC2P00724 532 aa3.33□□□□□ -1.88
VPS38YLR360W GCN4P03069 281 aa3.33□□□□□ -1.88
VPS38YLR360W EXO70P19658 623 aa3.33□□□□□ -1.88
VPS38YLR360W AIM22P47051 409 aa3.33□□□□□ -1.88
VPS38YLR360W CAF130P53280 1122 aaPredicted RBP3.33□□□□□ -1.88
VPS38YLR360W GPI1P53306 609 aa3.33□□□□□ -1.88
VPS38YLR360W VPS75P53853 264 aa3.33□□□□□ -1.88
VPS38YLR360W HEF3P53978 1044 aaKnown RBP3.33□□□□□ -1.88
VPS38YLR360W VPS74Q06385 345 aa3.33□□□□□ -1.88
VPS38YLR360W FOB1O13329 566 aa3.32□□□□□ -1.88
VPS38YLR360W MES1P00958 751 aaKnown RBP3.32□□□□□ -1.88
VPS38YLR360W HEM2P05373 342 aa3.32□□□□□ -1.88
VPS38YLR360W COR1P07256 457 aa3.32□□□□□ -1.88
VPS38YLR360W DFR1P07807 211 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
VPS38YLR360W WBP1P33767 430 aaKnown RBP3.32□□□□□ -1.88
VPS38YLR360W PMU1P36069 295 aa3.32□□□□□ -1.88
VPS38YLR360W TUL1P36096 758 aa3.32□□□□□ -1.88
VPS38YLR360W YBR225WP38321 900 aa3.32□□□□□ -1.88
VPS38YLR360W MBB1P39534 108 aa3.32□□□□□ -1.88
VPS38YLR360W ALG8P40351 577 aa3.32□□□□□ -1.88
VPS38YLR360W ELP2P42935 788 aa3.32□□□□□ -1.88
VPS38YLR360W YDR239CQ03780 787 aa3.32□□□□□ -1.88
VPS38YLR360W FIN1Q03898 291 aa3.32□□□□□ -1.88
VPS38YLR360W PRP2P20095 876 aaPredicted RBP3.31□□□□□ -1.88
VPS38YLR360W YBP1P38315 674 aa3.31□□□□□ -1.88
VPS38YLR360W YJL132WP47014 750 aa3.31□□□□□ -1.88
VPS38YLR360W PET130P47065 347 aa3.31□□□□□ -1.88
VPS38YLR360W ARE2P53629 642 aaKnown RBP3.31□□□□□ -1.88
VPS38YLR360W WSC2P53832 503 aa3.31□□□□□ -1.88
VPS38YLR360W RBS1Q05672 457 aaKnown RBP3.31□□□□□ -1.88
VPS38YLR360W CFT2Q12102 859 aaPredicted RBP3.31□□□□□ -1.88
VPS38YLR360W RAV1P47104 1357 aa3.3□□□□□ -1.88
VPS38YLR360W ATR1P13090 542 aa3.3□□□□□ -1.88
VPS38YLR360W CBS2P14905 389 aa3.3□□□□□ -1.88
VPS38YLR360W HSC82P15108 705 aaKnown RBP3.3□□□□□ -1.88
VPS38YLR360W MET8P15807 274 aa3.3□□□□□ -1.88
VPS38YLR360W GLK1P17709 500 aaKnown RBP3.3□□□□□ -1.88
VPS38YLR360W PRD1P25375 712 aa3.3□□□□□ -1.88
VPS38YLR360W YBR139WP38109 508 aa3.3□□□□□ -1.88
VPS38YLR360W CST26P38226 397 aa3.3□□□□□ -1.88
VPS38YLR360W POP1P41812 875 aa3.3□□□□□ -1.88
VPS38YLR360W BRR1Q99177 341 aaPredicted RBP3.3□□□□□ -1.88
VPS38YLR360W PCA1P38360 1216 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms