RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W HSH49Q99181 213 aaPredicted RBP3.61□□□□□ -1.83
SMD2YLR275W HEM2P05373 342 aa3.6□□□□□ -1.83
SMD2YLR275W EST1P17214 699 aaPredicted RBP3.6□□□□□ -1.83
SMD2YLR275W YCR022CP25620 114 aa3.6□□□□□ -1.83
SMD2YLR275W SEF1P34228 1148 aa3.6□□□□□ -1.83
SMD2YLR275W PMU1P36069 295 aa3.6□□□□□ -1.83
SMD2YLR275W FLC2P39719 783 aa3.6□□□□□ -1.83
SMD2YLR275W SHO1P40073 367 aa3.6□□□□□ -1.83
SMD2YLR275W VID30P53076 958 aa3.6□□□□□ -1.83
SMD2YLR275W IPI3P53877 555 aa3.6□□□□□ -1.83
SMD2YLR275W YEH1Q07804 573 aa3.6□□□□□ -1.83
SMD2YLR275W NMD4Q12129 218 aa3.6□□□□□ -1.83
SMD2YLR275W SUC2P00724 532 aa3.59□□□□□ -1.83
SMD2YLR275W ATR1P13090 542 aa3.59□□□□□ -1.83
SMD2YLR275W PAH1P32567 862 aa3.59□□□□□ -1.83
SMD2YLR275W UTR4P32626 227 aa3.59□□□□□ -1.83
SMD2YLR275W TUL1P36096 758 aa3.59□□□□□ -1.83
SMD2YLR275W PCA1P38360 1216 aa3.59□□□□□ -1.83
SMD2YLR275W ALG5P40350 334 aa3.59□□□□□ -1.83
SMD2YLR275W ALG8P40351 577 aa3.59□□□□□ -1.83
SMD2YLR275W IDP2P41939 412 aa3.59□□□□□ -1.83
SMD2YLR275W ALK1P43633 760 aaKnown RBP3.59□□□□□ -1.83
SMD2YLR275W TOF2Q02208 771 aa3.59□□□□□ -1.83
SMD2YLR275W COQ9Q05779 260 aa3.59□□□□□ -1.83
SMD2YLR275W THP1Q08231 455 aa3.59□□□□□ -1.83
SMD2YLR275W LSP1Q12230 341 aaKnown RBP3.59□□□□□ -1.83
SMD2YLR275W YPT6Q99260 215 aa3.59□□□□□ -1.83
SMD2YLR275W SEC53P07283 254 aaKnown RBP3.58□□□□□ -1.84
SMD2YLR275W SHP1P34223 423 aa3.58□□□□□ -1.84
SMD2YLR275W TIF5P38431 405 aaKnown RBP3.58□□□□□ -1.84
SMD2YLR275W IRC15Q02733 499 aa3.58□□□□□ -1.84
SMD2YLR275W VPS74Q06385 345 aa3.58□□□□□ -1.84
SMD2YLR275W PHO92Q06390 306 aa3.58□□□□□ -1.84
SMD2YLR275W SEM1O94742 89 aa3.57□□□□□ -1.84
SMD2YLR275W NOP1P15646 327 aaKnown RBP3.57□□□□□ -1.84
SMD2YLR275W EXO70P19658 623 aa3.57□□□□□ -1.84
SMD2YLR275W BNA4P38169 460 aa3.57□□□□□ -1.84
SMD2YLR275W TIF4631P39935 952 aaKnown RBP3.57□□□□□ -1.84
SMD2YLR275W YPI1P43587 155 aa3.57□□□□□ -1.84
SMD2YLR275W IMD4P50094 524 aaKnown RBP3.57□□□□□ -1.84
SMD2YLR275W ENT1Q12518 454 aa3.57□□□□□ -1.84
SMD2YLR275W SAN1P22470 610 aa3.56□□□□□ -1.84
SMD2YLR275W PUT3P25502 979 aaPredicted RBP3.56□□□□□ -1.84
SMD2YLR275W DUG2P38149 878 aa3.56□□□□□ -1.84
SMD2YLR275W TCM62P38228 572 aaKnown RBP3.56□□□□□ -1.84
SMD2YLR275W MSR1P38714 643 aa3.56□□□□□ -1.84
SMD2YLR275W HAT2P39984 401 aa3.56□□□□□ -1.84
SMD2YLR275W NOP16P40007 231 aaKnown RBP3.56□□□□□ -1.84
SMD2YLR275W VID27P40157 782 aa3.56□□□□□ -1.84
SMD2YLR275W SPG5P42933 373 aa3.56□□□□□ -1.84
SMD2YLR275W AIM22P47051 409 aa3.56□□□□□ -1.84
SMD2YLR275W GPI1P53306 609 aa3.56□□□□□ -1.84
SMD2YLR275W SMA2Q04658 369 aa3.56□□□□□ -1.84
SMD2YLR275W AAC3P18238 307 aa3.55□□□□□ -1.84
SMD2YLR275W ELO2P25358 347 aa3.55□□□□□ -1.84
SMD2YLR275W PAP1P29468 568 aaKnown RBP3.55□□□□□ -1.84
SMD2YLR275W MSN2P33748 704 aa3.55□□□□□ -1.84
SMD2YLR275W TCD2P36101 447 aaKnown RBP3.55□□□□□ -1.84
SMD2YLR275W NOP4P37838 685 aaKnown RBP3.55□□□□□ -1.84
SMD2YLR275W ELP2P42935 788 aa3.55□□□□□ -1.84
SMD2YLR275W RBG2P53295 368 aaKnown RBP3.55□□□□□ -1.84
SMD2YLR275W WSC2P53832 503 aa3.55□□□□□ -1.84
SMD2YLR275W HEF3P53978 1044 aaKnown RBP3.55□□□□□ -1.84
SMD2YLR275W RPC11Q04307 110 aaPredicted RBP3.55□□□□□ -1.84
SMD2YLR275W YDR056CQ12025 205 aa3.55□□□□□ -1.84
SMD2YLR275W RCN2Q12044 265 aa3.55□□□□□ -1.84
SMD2YLR275W RLM1Q12224 676 aa3.55□□□□□ -1.84
SMD2YLR275W YJR112W-AQ3E743 109 aa3.55□□□□□ -1.84
SMD2YLR275W YCL021W-AQ96VH3 125 aa3.55□□□□□ -1.84
SMD2YLR275W REV1P12689 985 aa3.54□□□□□ -1.84
SMD2YLR275W PMR1P13586 950 aa3.54□□□□□ -1.84
SMD2YLR275W REG2P38232 338 aa3.54□□□□□ -1.84
SMD2YLR275W GWT1P47026 490 aa3.54□□□□□ -1.84
SMD2YLR275W YGR066CP53242 292 aa3.54□□□□□ -1.84
SMD2YLR275W MSO1P53604 210 aaKnown RBP3.54□□□□□ -1.84
SMD2YLR275W FIN1Q03898 291 aa3.54□□□□□ -1.84
SMD2YLR275W RBS1Q05672 457 aaKnown RBP3.54□□□□□ -1.84
SMD2YLR275W HNT3Q08702 217 aa3.54□□□□□ -1.84
SMD2YLR275W CTI6Q08923 506 aa3.54□□□□□ -1.84
SMD2YLR275W CFT2Q12102 859 aaPredicted RBP3.54□□□□□ -1.84
SMD2YLR275W CTF3Q12748 733 aa3.54□□□□□ -1.84
SMD2YLR275W HSC82P15108 705 aaKnown RBP3.53□□□□□ -1.84
SMD2YLR275W PRP2P20095 876 aaPredicted RBP3.53□□□□□ -1.84
SMD2YLR275W SGN1P40561 250 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SMD2YLR275W UPF3P48412 387 aaKnown RBP3.53□□□□□ -1.84
SMD2YLR275W MRX6P48564 524 aa3.53□□□□□ -1.84
SMD2YLR275W YGL242CP53066 181 aa3.53□□□□□ -1.84
SMD2YLR275W ZPR1P53303 486 aaKnown RBP3.53□□□□□ -1.84
SMD2YLR275W VPS38Q05919 439 aa3.53□□□□□ -1.84
SMD2YLR275W AVL9Q12500 764 aa3.53□□□□□ -1.84
SMD2YLR275W COR1P07256 457 aa3.52□□□□□ -1.85
SMD2YLR275W LPD1P09624 499 aaKnown RBP3.52□□□□□ -1.85
SMD2YLR275W CBS1P14066 229 aa3.52□□□□□ -1.85
SMD2YLR275W GLK1P17709 500 aaKnown RBP3.52□□□□□ -1.85
SMD2YLR275W RNA14P25298 677 aaKnown RBP3.52□□□□□ -1.85
SMD2YLR275W YME1P32795 747 aa3.52□□□□□ -1.85
SMD2YLR275W SWH1P35845 1188 aa3.52□□□□□ -1.85
SMD2YLR275W BRR1Q99177 341 aaPredicted RBP3.52□□□□□ -1.85
SMD2YLR275W MES1P00958 751 aaKnown RBP3.51□□□□□ -1.85
SMD2YLR275W GAL80P04387 435 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms