RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX3	YLR107W	CCT4	P39078	528 aa	Known RBP	4.85	□□□□□ -1.63
REX3	YLR107W	DHH1	P39517	506 aa	Known RBP	4.85	□□□□□ -1.63
REX3	YLR107W	TOF2	Q02208	771 aa		4.85	□□□□□ -1.63
REX3	YLR107W	BNA5	Q05979	453 aa		4.85	□□□□□ -1.63
REX3	YLR107W	YTH1	Q06102	208 aa	Predicted RBP	4.85	□□□□□ -1.63
REX3	YLR107W	SUC2	P00724	532 aa		4.84	□□□□□ -1.63
REX3	YLR107W	HSC82	P15108	705 aa	Known RBP	4.84	□□□□□ -1.63
REX3	YLR107W	OCA4	P25366	362 aa		4.84	□□□□□ -1.63
REX3	YLR107W	LOS1	P33418	1100 aa	Predicted RBP	4.84	□□□□□ -1.63
REX3	YLR107W	SHP1	P34223	423 aa		4.84	□□□□□ -1.63
REX3	YLR107W	VPS52	P39904	641 aa		4.84	□□□□□ -1.63
REX3	YLR107W	MET28	P40573	187 aa		4.84	□□□□□ -1.63
REX3	YLR107W	TIM10	P87108	93 aa		4.84	□□□□□ -1.63
REX3	YLR107W	RTT103	Q05543	409 aa		4.84	□□□□□ -1.63
REX3	YLR107W	THP1	Q08231	455 aa		4.84	□□□□□ -1.63
REX3	YLR107W	GAL80	P04387	435 aa		4.83	□□□□□ -1.64
REX3	YLR107W	YCR007C	P25354	239 aa		4.83	□□□□□ -1.64
REX3	YLR107W	TIF4631	P39935	952 aa	Known RBP	4.83	□□□□□ -1.64
REX3	YLR107W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	RIP-Chip
REX3	YLR107W	SLD5	Q03406	294 aa		4.83	□□□□□ -1.64
REX3	YLR107W	MFB1	Q04922	465 aa		4.83	□□□□□ -1.64
REX3	YLR107W	YBR298C-A	Q8TGK4	73 aa		4.83	□□□□□ -1.64
REX3	YLR107W	RPL15A	P05748	204 aa	Known RBP	4.82	□□□□□ -1.64
REX3	YLR107W	PRP2	P20095	876 aa	Predicted RBP	4.82	□□□□□ -1.64
REX3	YLR107W	NDC1	P32500	655 aa		4.82	□□□□□ -1.64
REX3	YLR107W	MRE11	P32829	692 aa		4.82	□□□□□ -1.64
REX3	YLR107W	TCM62	P38228	572 aa	Known RBP	4.82	□□□□□ -1.64
REX3	YLR107W	YEL057C	P39983	233 aa		4.82	□□□□□ -1.64
REX3	YLR107W	RTT101	P47050	842 aa		4.82	□□□□□ -1.64
REX3	YLR107W	SYO1	Q07395	620 aa		4.82	□□□□□ -1.64
REX3	YLR107W	PAP1	P29468	568 aa	Known RBP	4.81	□□□□□ -1.64
REX3	YLR107W	YME1	P32795	747 aa		4.81	□□□□□ -1.64
REX3	YLR107W	MSN2	P33748	704 aa		4.81	□□□□□ -1.64
REX3	YLR107W	DUG2	P38149	878 aa		4.81	□□□□□ -1.64
REX3	YLR107W	BNA4	P38169	460 aa		4.81	□□□□□ -1.64
REX3	YLR107W	MDM31	P38880	579 aa		4.81	□□□□□ -1.64
REX3	YLR107W	RMD8	P43620	662 aa		4.81	□□□□□ -1.64
REX3	YLR107W	PET130	P47065	347 aa		4.81	□□□□□ -1.64
REX3	YLR107W	RBG2	P53295	368 aa	Known RBP	4.81	□□□□□ -1.64
REX3	YLR107W	HEF3	P53978	1044 aa	Known RBP	4.81	□□□□□ -1.64
REX3	YLR107W	IVY1	Q04934	453 aa		4.81	□□□□□ -1.64
REX3	YLR107W	ERP1	Q05359	219 aa	Known RBP	4.81	□□□□□ -1.64
REX3	YLR107W	YDL009C	Q12210	107 aa		4.81	□□□□□ -1.64
REX3	YLR107W	FOB1	O13329	566 aa		4.8	□□□□□ -1.64
REX3	YLR107W	MTF1	P14908	341 aa	Known RBP	4.8	□□□□□ -1.64
REX3	YLR107W	PRO3	P32263	286 aa	Known RBP	4.8	□□□□□ -1.64
REX3	YLR107W	UTR4	P32626	227 aa		4.8	□□□□□ -1.64
REX3	YLR107W	FRE1	P32791	686 aa		4.8	□□□□□ -1.64
REX3	YLR107W	PTR2	P32901	601 aa		4.8	□□□□□ -1.64
REX3	YLR107W	SPO22	P40511	975 aa		4.8	□□□□□ -1.64
REX3	YLR107W	RLI1	Q03195	608 aa	Known RBP	4.8	□□□□□ -1.64
REX3	YLR107W	CAR1	P00812	333 aa	Known RBP	4.79	□□□□□ -1.64
REX3	YLR107W	ATS1	P31386	333 aa		4.79	□□□□□ -1.64
REX3	YLR107W	SPC110	P32380	944 aa		4.79	□□□□□ -1.64
REX3	YLR107W	RGT1	P32862	1170 aa		4.79	□□□□□ -1.64
REX3	YLR107W	DOT5	P40553	215 aa		4.79	□□□□□ -1.64
REX3	YLR107W	RPR2	P40571	144 aa		4.79	□□□□□ -1.64
REX3	YLR107W	RPT6	Q01939	405 aa	Known RBP	4.79	□□□□□ -1.64
REX3	YLR107W	PHO92	Q06390	306 aa		4.79	□□□□□ -1.64
REX3	YLR107W	PPT2	Q12036	173 aa		4.79	□□□□□ -1.64
REX3	YLR107W	COR1	P07256	457 aa		4.78	□□□□□ -1.64
REX3	YLR107W	MRP7	P12687	371 aa		4.78	□□□□□ -1.64
REX3	YLR107W	BUD14	P27637	709 aa		4.78	□□□□□ -1.64
REX3	YLR107W	RPH1	P39956	796 aa		4.78	□□□□□ -1.64
REX3	YLR107W	ROK1	P45818	564 aa	Predicted RBP	4.78	□□□□□ -1.64
REX3	YLR107W	YDL186W	P48568	277 aa		4.78	□□□□□ -1.64
REX3	YLR107W	MRPL51	Q06090	140 aa	Predicted RBP	4.78	□□□□□ -1.64
REX3	YLR107W	SEC39	Q12745	709 aa		4.78	□□□□□ -1.64
REX3	YLR107W	YDL007C-A	Q2V2Q0	85 aa		4.78	□□□□□ -1.64
REX3	YLR107W	ARG3	P05150	338 aa		4.77	□□□□□ -1.65
REX3	YLR107W	CST26	P38226	397 aa		4.77	□□□□□ -1.65
REX3	YLR107W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
REX3	YLR107W	MBB1	P39534	108 aa		4.77	□□□□□ -1.65
REX3	YLR107W	IRC6	P43615	237 aa		4.77	□□□□□ -1.65
REX3	YLR107W	COS10	P52924	374 aa		4.77	□□□□□ -1.65
REX3	YLR107W	ZPR1	P53303	486 aa	Known RBP	4.77	□□□□□ -1.65
REX3	YLR107W	GPI1	P53306	609 aa		4.77	□□□□□ -1.65
REX3	YLR107W	SLG1	P54867	378 aa		4.77	□□□□□ -1.65
REX3	YLR107W	RBS1	Q05672	457 aa	Known RBP	4.77	□□□□□ -1.65
REX3	YLR107W	MRD1	Q06106	887 aa	Known RBP	4.77	□□□□□ -1.65
REX3	YLR107W	CFT2	Q12102	859 aa	Predicted RBP	4.77	□□□□□ -1.65
REX3	YLR107W	LSP1	Q12230	341 aa	Known RBP	4.77	□□□□□ -1.65
REX3	YLR107W	SET6	Q12529	373 aa		4.77	□□□□□ -1.65
REX3	YLR107W	RAV1	P47104	1357 aa		4.77	□□□□□ -1.65
REX3	YLR107W	PRP16	P15938	1071 aa	Predicted RBP	4.76	□□□□□ -1.65
REX3	YLR107W	MTC4	P38335	694 aa	Known RBP	4.76	□□□□□ -1.65
REX3	YLR107W	KRE9	P39005	276 aa		4.76	□□□□□ -1.65
REX3	YLR107W	ERP2	P39704	215 aa		4.76	□□□□□ -1.65
REX3	YLR107W	ESL1	P40456	1118 aa		4.76	□□□□□ -1.65
REX3	YLR107W	MET18	P40469	1032 aa		4.76	□□□□□ -1.65
REX3	YLR107W	YJL213W	P40896	331 aa		4.76	□□□□□ -1.65
REX3	YLR107W	YFR016C	P43597	1233 aa	Known RBP	4.76	□□□□□ -1.65
REX3	YLR107W	CAF130	P53280	1122 aa	Predicted RBP	4.76	□□□□□ -1.65
REX3	YLR107W	KEL3	Q08979	651 aa	Predicted RBP	4.76	□□□□□ -1.65
REX3	YLR107W	AYT1	Q12226	474 aa		4.76	□□□□□ -1.65
REX3	YLR107W	BRR1	Q99177	341 aa	Predicted RBP	4.76	□□□□□ -1.65
REX3	YLR107W	RPL31B	P0C2H9	113 aa	Known RBP	4.75	□□□□□ -1.65
REX3	YLR107W	YCR022C	P25620	114 aa		4.75	□□□□□ -1.65
REX3	YLR107W	UTP9	P38882	575 aa	Known RBP	4.75	□□□□□ -1.65
REX3	YLR107W	ARF3	P40994	183 aa	RIP-Chip data	4.75	□□□□□ -1.65	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms