RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C TVP15Q03860 143 aa9.89□□□□□ -0.83
SHB17YKR043C OMS1Q06668 471 aa9.89□□□□□ -0.83
SHB17YKR043C BSC6Q08280 497 aa9.89□□□□□ -0.83
SHB17YKR043C IOC2Q12072 812 aa9.89□□□□□ -0.83
SHB17YKR043C YMR085WP0CF18 432 aa9.88□□□□□ -0.83
SHB17YKR043C TYR1P20049 452 aa9.88□□□□□ -0.83
SHB17YKR043C HXT4P32467 576 aa9.88□□□□□ -0.83
SHB17YKR043C HOG1P32485 435 aa9.88□□□□□ -0.83
SHB17YKR043C CBF5P33322 483 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
SHB17YKR043C HXT6P39003 570 aaKnown RBP9.88□□□□□ -0.83
SHB17YKR043C HXT7P39004 570 aa9.88□□□□□ -0.83
SHB17YKR043C KXD1P53158 218 aa9.88□□□□□ -0.83
SHB17YKR043C SLM2P53955 656 aa9.88□□□□□ -0.83
SHB17YKR043C DIC1Q06143 298 aa9.88□□□□□ -0.83
SHB17YKR043C GPB1Q08886 897 aa9.88□□□□□ -0.83
SHB17YKR043C YPL245WQ12179 454 aaKnown RBP9.88□□□□□ -0.83
SHB17YKR043C HAL9Q12180 1030 aa9.88□□□□□ -0.83
SHB17YKR043C YOL107WQ12239 342 aa9.88□□□□□ -0.83
SHB17YKR043C BRR1Q99177 341 aaPredicted RBP9.88□□□□□ -0.83
SHB17YKR043C AI3P03877 415 aa9.87□□□□□ -0.83
SHB17YKR043C GAL7P08431 366 aa9.87□□□□□ -0.83
SHB17YKR043C PDC5P16467 563 aaKnown RBP9.87□□□□□ -0.83
SHB17YKR043C BUB3P26449 341 aa9.87□□□□□ -0.83
SHB17YKR043C RPS1AP33442 255 aaKnown RBP9.87□□□□□ -0.83
SHB17YKR043C SQT1P35184 431 aa9.87□□□□□ -0.83
SHB17YKR043C YHL008CP38750 627 aa9.87□□□□□ -0.83
SHB17YKR043C GCD10P41814 478 aa9.87□□□□□ -0.83
SHB17YKR043C RIM21P48565 533 aa9.87□□□□□ -0.83
SHB17YKR043C FHN1P53279 174 aa9.87□□□□□ -0.83
SHB17YKR043C GTR2P53290 341 aa9.87□□□□□ -0.83
SHB17YKR043C ESF2P53743 316 aaKnown RBP9.87□□□□□ -0.83
SHB17YKR043C YPL109CQ02981 657 aa9.87□□□□□ -0.83
SHB17YKR043C RRN11Q04712 507 aa9.87□□□□□ -0.83
SHB17YKR043C LAG2Q92325 660 aa9.87□□□□□ -0.83
SHB17YKR043C PRP6P19735 899 aaPredicted RBP9.86□□□□□ -0.83
SHB17YKR043C HOP1P20050 605 aa9.86□□□□□ -0.83
SHB17YKR043C NTH1P32356 751 aa9.86□□□□□ -0.83
SHB17YKR043C COX13P32799 129 aa9.86□□□□□ -0.83
SHB17YKR043C KKQ8P36004 724 aa9.86□□□□□ -0.83
SHB17YKR043C EAP1P36041 632 aaKnown RBP9.86□□□□□ -0.83
SHB17YKR043C SEC31P38968 1273 aaKnown RBP9.86□□□□□ -0.83
SHB17YKR043C AZF1P41696 914 aa9.86□□□□□ -0.83
SHB17YKR043C FKH2P41813 862 aa9.86□□□□□ -0.83
SHB17YKR043C ALK1P43633 760 aaKnown RBP9.86□□□□□ -0.83
SHB17YKR043C YPT32P51996 222 aaKnown RBP9.86□□□□□ -0.83
SHB17YKR043C ROY1Q04847 553 aa9.86□□□□□ -0.83
SHB17YKR043C RRP45Q05636 305 aaKnown RBP9.86□□□□□ -0.83
SHB17YKR043C YLR030WQ07967 263 aa9.86□□□□□ -0.83
SHB17YKR043C YLR049CQ12110 428 aa9.86□□□□□ -0.83
SHB17YKR043C RPS21AP0C0V8 87 aaKnown RBP9.85□□□□□ -0.83
SHB17YKR043C STE4P18851 423 aa9.85□□□□□ -0.83
SHB17YKR043C MSB1P21339 1137 aaKnown RBP9.85□□□□□ -0.83
SHB17YKR043C RRN10P38204 145 aa9.85□□□□□ -0.83
SHB17YKR043C BEM4P39011 633 aa9.85□□□□□ -0.83
SHB17YKR043C MET30P39014 640 aa9.85□□□□□ -0.83
SHB17YKR043C YGL176CP46945 554 aa9.85□□□□□ -0.83
SHB17YKR043C YNR021WP53723 404 aaKnown RBP9.85□□□□□ -0.83
SHB17YKR043C GIP3Q03016 1276 aa9.85□□□□□ -0.83
SHB17YKR043C NOT5Q12514 560 aaPredicted RBP9.85□□□□□ -0.83
SHB17YKR043C TY4A-HQ6Q5P6 413 aa9.85□□□□□ -0.83
SHB17YKR043C COS2P0CX12 379 aa9.84□□□□□ -0.83
SHB17YKR043C COS3P0CX13 379 aa9.84□□□□□ -0.83
SHB17YKR043C YCR006CP25350 157 aa9.84□□□□□ -0.83
SHB17YKR043C ADE1P27616 306 aa9.84□□□□□ -0.83
SHB17YKR043C SFA1P32771 386 aa9.84□□□□□ -0.83
SHB17YKR043C VRG4P40107 337 aa9.84□□□□□ -0.83
SHB17YKR043C MNT3P40549 630 aa9.84□□□□□ -0.83
SHB17YKR043C TDA10P42938 290 aa9.84□□□□□ -0.83
SHB17YKR043C COS4P43542 379 aa9.84□□□□□ -0.83
SHB17YKR043C TAF6P53040 516 aa9.84□□□□□ -0.83
SHB17YKR043C YPR022CQ12139 1133 aa9.84□□□□□ -0.83
SHB17YKR043C MHT1Q12525 324 aa9.84□□□□□ -0.83
SHB17YKR043C SEC39Q12745 709 aa9.84□□□□□ -0.83
SHB17YKR043C CSF1Q12150 2958 aa9.83□□□□□ -0.84
SHB17YKR043C PRP2P20095 876 aaPredicted RBP9.83□□□□□ -0.84
SHB17YKR043C AGP1P25376 633 aa9.83□□□□□ -0.84
SHB17YKR043C BUB2P26448 306 aaPredicted RBP9.83□□□□□ -0.84
SHB17YKR043C YBR062CP38239 180 aa9.83□□□□□ -0.84
SHB17YKR043C BMT2P38278 337 aa9.83□□□□□ -0.84
SHB17YKR043C SHU2P38957 223 aa9.83□□□□□ -0.84
SHB17YKR043C YER158CP40095 573 aa9.83□□□□□ -0.84
SHB17YKR043C MET18P40469 1032 aa9.83□□□□□ -0.84
SHB17YKR043C CAB2P40506 365 aa9.83□□□□□ -0.84
SHB17YKR043C SPG5P42933 373 aa9.83□□□□□ -0.84
SHB17YKR043C MET12P46151 657 aa9.83□□□□□ -0.84
SHB17YKR043C SDH1Q00711 640 aa9.83□□□□□ -0.84
SHB17YKR043C LEU9Q12166 604 aaKnown RBP9.83□□□□□ -0.84
SHB17YKR043C YCL012CQ8J0M4 134 aa9.83□□□□□ -0.84
SHB17YKR043C RIP1P08067 215 aa9.82□□□□□ -0.84
SHB17YKR043C TRX3P25372 127 aa9.82□□□□□ -0.84
SHB17YKR043C GBP2P25555 427 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
SHB17YKR043C PRO1P32264 428 aa9.82□□□□□ -0.84
SHB17YKR043C TAF14P35189 244 aa9.82□□□□□ -0.84
SHB17YKR043C EHT1P38295 451 aa9.82□□□□□ -0.84
SHB17YKR043C SCS2P40075 244 aaKnown RBP9.82□□□□□ -0.84
SHB17YKR043C APQ12P40532 138 aa9.82□□□□□ -0.84
SHB17YKR043C TRS85P46944 698 aa9.82□□□□□ -0.84
SHB17YKR043C NOP19P53317 196 aaPredicted RBP9.82□□□□□ -0.84
SHB17YKR043C SIZ1Q04195 904 aa9.82□□□□□ -0.84
SHB17YKR043C YMR111CQ04461 462 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms