RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W CBF5P33322 483 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
NUP100YKL068W HCS1P34243 683 aa2.29□□□□□ -2.04
NUP100YKL068W PTK1P36002 662 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W CUE2P36075 443 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W TUL1P36096 758 aa2.29□□□□□ -2.04
NUP100YKL068W GEX2P36173 615 aa2.29□□□□□ -2.04
NUP100YKL068W ALG14P38242 237 aa2.29□□□□□ -2.04
NUP100YKL068W KEL1P38853 1164 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W MLH1P38920 769 aa2.29□□□□□ -2.04
NUP100YKL068W SSO2P39926 295 aa2.29□□□□□ -2.04
NUP100YKL068W PTI1P39927 425 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W GID8P40208 455 aa2.29□□□□□ -2.04
NUP100YKL068W YIL077CP40508 320 aa2.29□□□□□ -2.04
NUP100YKL068W YIR014WP40570 242 aa2.29□□□□□ -2.04
NUP100YKL068W YJL107CP42947 387 aa2.29□□□□□ -2.04
NUP100YKL068W GCD14P46959 383 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W YJL132WP47014 750 aa2.29□□□□□ -2.04
NUP100YKL068W IRC8P47046 822 aa2.29□□□□□ -2.04
NUP100YKL068W ECM27P47144 725 aa2.29□□□□□ -2.04
NUP100YKL068W RPS7BP48164 190 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W FMS1P50264 508 aa2.29□□□□□ -2.04
NUP100YKL068W COS12P53053 380 aa2.29□□□□□ -2.04
NUP100YKL068W BUD9P53226 547 aa2.29□□□□□ -2.04
NUP100YKL068W CLU1Q03690 1277 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W ACL4Q03771 387 aa2.29□□□□□ -2.04
NUP100YKL068W RPN9Q04062 393 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W HCR1Q05775 265 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W TSR1Q07381 788 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W WHI4Q07655 649 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W YPL272CQ08984 517 aa2.29□□□□□ -2.04
NUP100YKL068W ULA1Q12059 462 aa2.29□□□□□ -2.04
NUP100YKL068W YBR085C-AO43137 85 aa2.28□□□□□ -2.04
NUP100YKL068W CDC36P06100 191 aaPredicted RBP2.28□□□□□ -2.04
NUP100YKL068W DAL81P21657 970 aa2.28□□□□□ -2.04
NUP100YKL068W RPI1P23250 407 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W SUA5P32579 426 aa2.28□□□□□ -2.04
NUP100YKL068W YKL070WP36087 169 aa2.28□□□□□ -2.04
NUP100YKL068W ECM4P36156 370 aa2.28□□□□□ -2.04
NUP100YKL068W SLX1P38324 304 aa2.28□□□□□ -2.04
NUP100YKL068W YHR112CP38716 378 aa2.28□□□□□ -2.04
NUP100YKL068W SIP3P38717 1229 aa2.28□□□□□ -2.04
NUP100YKL068W MNL1P38888 796 aa2.28□□□□□ -2.04
NUP100YKL068W FKH2P41813 862 aa2.28□□□□□ -2.04
NUP100YKL068W IDS2P46958 469 aa2.28□□□□□ -2.04
NUP100YKL068W YGR149WP48236 432 aa2.28□□□□□ -2.04
NUP100YKL068W YIP5P53108 310 aa2.28□□□□□ -2.04
NUP100YKL068W YGR012WP53206 393 aa2.28□□□□□ -2.04
NUP100YKL068W PRM1P53835 661 aa2.28□□□□□ -2.04
NUP100YKL068W YNL144CP53907 740 aa2.28□□□□□ -2.04
NUP100YKL068W UTP6Q02354 440 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W MTG1Q03151 367 aaPredicted RBP2.28□□□□□ -2.04
NUP100YKL068W PDS5Q04264 1277 aa2.28□□□□□ -2.04
NUP100YKL068W URC2Q04411 772 aa2.28□□□□□ -2.04
NUP100YKL068W YML053CQ04978 212 aa2.28□□□□□ -2.04
NUP100YKL068W SSQ1Q05931 657 aaPredicted RBP2.28□□□□□ -2.04
NUP100YKL068W VTA1Q06263 330 aa2.28□□□□□ -2.04
NUP100YKL068W CDA1Q06702 301 aa2.28□□□□□ -2.04
NUP100YKL068W YLL007CQ07799 665 aa2.28□□□□□ -2.04
NUP100YKL068W AIM41Q12032 185 aa2.28□□□□□ -2.04
NUP100YKL068W AI3P03877 415 aa2.28□□□□□ -2.04
NUP100YKL068W SEC12P11655 471 aa2.28□□□□□ -2.04
NUP100YKL068W MRP13P12686 339 aa2.28□□□□□ -2.04
NUP100YKL068W URA4P20051 364 aa2.28□□□□□ -2.04
NUP100YKL068W RNR1P21524 888 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W APL1P27351 700 aa2.28□□□□□ -2.04
NUP100YKL068W HSP104P31539 908 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W EFB1P32471 206 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W TCD1P38756 429 aa2.28□□□□□ -2.04
NUP100YKL068W BZZ1P38822 633 aa2.28□□□□□ -2.04
NUP100YKL068W PEX7P39108 375 aa2.28□□□□□ -2.04
NUP100YKL068W EMC2P47133 292 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W CGR1P53188 120 aa2.28□□□□□ -2.04
NUP100YKL068W RPT4P53549 437 aaKnown RBP2.28□□□□□ -2.04
NUP100YKL068W ARG5,6Q01217 863 aa2.28□□□□□ -2.04
NUP100YKL068W RSM28Q03430 361 aa2.28□□□□□ -2.04
NUP100YKL068W SMA2Q04658 369 aa2.28□□□□□ -2.04
NUP100YKL068W BCP1Q06338 283 aa2.28□□□□□ -2.04
NUP100YKL068W GPN2Q08726 347 aaPredicted RBP2.28□□□□□ -2.04
NUP100YKL068W HMI1Q12039 706 aa2.28□□□□□ -2.04
NUP100YKL068W YVC1Q12324 675 aa2.28□□□□□ -2.04
NUP100YKL068W YPR089WO13585 888 aa2.28□□□□□ -2.05
NUP100YKL068W SUP35P05453 685 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W ILV5P06168 395 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W RPS4AP0CX35 261 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W RPS4BP0CX36 261 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W SPO7P18410 259 aa2.28□□□□□ -2.05
NUP100YKL068W YCR061WP25639 631 aa2.28□□□□□ -2.05
NUP100YKL068W RFA2P26754 273 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W BEM1P29366 551 aa2.28□□□□□ -2.05
NUP100YKL068W PRS1P32895 427 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W TIF3P34167 436 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W YBR139WP38109 508 aa2.28□□□□□ -2.05
NUP100YKL068W YHL012WP38709 493 aa2.28□□□□□ -2.05
NUP100YKL068W MSS4P38994 779 aa2.28□□□□□ -2.05
NUP100YKL068W YHB1P39676 399 aaKnown RBP2.28□□□□□ -2.05
NUP100YKL068W RTR1P40084 226 aaPredicted RBP2.28□□□□□ -2.05
NUP100YKL068W SCC4P40090 624 aa2.28□□□□□ -2.05
NUP100YKL068W ULP2P40537 1034 aaPredicted RBP2.28□□□□□ -2.05
NUP100YKL068W MND1P53102 219 aa2.28□□□□□ -2.05
NUP100YKL068W MPS2P53159 387 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms