RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YCK1P23291 538 aa4.32□□□□□ -1.72
PTM1YKL039W RPS2P25443 254 aaKnown RBP4.32□□□□□ -1.72
PTM1YKL039W YBL055CP34220 418 aaPredicted RBP4.32□□□□□ -1.72
PTM1YKL039W APT1P49435 187 aaKnown RBP4.32□□□□□ -1.72
PTM1YKL039W YDR056CQ12025 205 aa4.32□□□□□ -1.72
PTM1YKL039W YBR126W-AQ8TGU7 68 aa4.32□□□□□ -1.72
PTM1YKL039W BUD5P25300 642 aaPredicted RBP4.31□□□□□ -1.72
PTM1YKL039W POL4P25615 582 aa4.31□□□□□ -1.72
PTM1YKL039W SNC1P31109 117 aa4.31□□□□□ -1.72
PTM1YKL039W ERG1P32476 496 aaKnown RBP4.31□□□□□ -1.72
PTM1YKL039W MTR2P34232 184 aaKnown RBP4.31□□□□□ -1.72
PTM1YKL039W MIC60P36112 540 aa4.31□□□□□ -1.72
PTM1YKL039W NUP133P36161 1157 aa4.31□□□□□ -1.72
PTM1YKL039W MSC1Q03104 513 aa4.31□□□□□ -1.72
PTM1YKL039W NGL3Q03210 505 aa4.31□□□□□ -1.72
PTM1YKL039W YIH1P25637 258 aa4.31□□□□□ -1.72
PTM1YKL039W SAC6P32599 642 aaKnown RBP4.31□□□□□ -1.72
PTM1YKL039W TRS65P32893 560 aa4.31□□□□□ -1.72
PTM1YKL039W YKL100CP34248 587 aa4.31□□□□□ -1.72
PTM1YKL039W RIM2P38127 377 aa4.31□□□□□ -1.72
PTM1YKL039W YBL029WP38201 376 aa4.31□□□□□ -1.72
PTM1YKL039W LAG1P38703 411 aa4.31□□□□□ -1.72
PTM1YKL039W CCT6P39079 546 aa4.31□□□□□ -1.72
PTM1YKL039W LCL3P53153 274 aa4.31□□□□□ -1.72
PTM1YKL039W YVH1Q02256 364 aaKnown RBP4.31□□□□□ -1.72
PTM1YKL039W MSS11Q03825 758 aa4.31□□□□□ -1.72
PTM1YKL039W DIC1Q06143 298 aa4.31□□□□□ -1.72
PTM1YKL039W SEM1O94742 89 aa4.3□□□□□ -1.72
PTM1YKL039W MF(ALPHA)1P01149 165 aa4.3□□□□□ -1.72
PTM1YKL039W TYR1P20049 452 aa4.3□□□□□ -1.72
PTM1YKL039W ACH1P32316 526 aa4.3□□□□□ -1.72
PTM1YKL039W ROT2P38138 954 aa4.3□□□□□ -1.72
PTM1YKL039W YJL070CP40361 888 aa4.3□□□□□ -1.72
PTM1YKL039W FAR3P46671 204 aa4.3□□□□□ -1.72
PTM1YKL039W UPF3P48412 387 aaKnown RBP4.3□□□□□ -1.72
PTM1YKL039W YMR160WQ03823 816 aa4.3□□□□□ -1.72
PTM1YKL039W BUD22Q04347 519 aaKnown RBP4.3□□□□□ -1.72
PTM1YKL039W SSK1Q07084 712 aa4.3□□□□□ -1.72
PTM1YKL039W LUC7Q07508 261 aaPredicted RBP4.3□□□□□ -1.72
PTM1YKL039W FMP45Q07651 309 aa4.3□□□□□ -1.72
PTM1YKL039W NOP58Q12499 511 aaKnown RBP4.3□□□□□ -1.72
PTM1YKL039W ARP6Q12509 438 aa4.3□□□□□ -1.72
PTM1YKL039W POM152P39685 1337 aa4.29□□□□□ -1.72
PTM1YKL039W RPS24AP0CX31 135 aaKnown RBP4.29□□□□□ -1.72
PTM1YKL039W RPS24BP0CX32 135 aaKnown RBP4.29□□□□□ -1.72
PTM1YKL039W AAC3P18238 307 aa4.29□□□□□ -1.72
PTM1YKL039W SGV1P23293 657 aaKnown RBP4.29□□□□□ -1.72
PTM1YKL039W BOS1P25385 244 aa4.29□□□□□ -1.72
PTM1YKL039W IMG1P25626 169 aa4.29□□□□□ -1.72
PTM1YKL039W NOP16P40007 231 aaKnown RBP4.29□□□□□ -1.72
PTM1YKL039W AXL1P40851 1208 aa4.29□□□□□ -1.72
PTM1YKL039W YGR127WP53275 312 aa4.29□□□□□ -1.72
PTM1YKL039W DAP1Q12091 152 aa4.29□□□□□ -1.72
PTM1YKL039W SAN1P22470 610 aa4.28□□□□□ -1.72
PTM1YKL039W SSE2P32590 693 aaKnown RBP4.28□□□□□ -1.72
PTM1YKL039W FMP46P36141 133 aaKnown RBP4.28□□□□□ -1.72
PTM1YKL039W PTR3P43606 678 aa4.28□□□□□ -1.72
PTM1YKL039W YGL260WP53056 76 aa4.28□□□□□ -1.72
PTM1YKL039W SMM1P53720 384 aaKnown RBP4.28□□□□□ -1.72
PTM1YKL039W TDA7P53882 636 aaPredicted RBP4.28□□□□□ -1.72
PTM1YKL039W YPL014WQ02606 381 aa4.28□□□□□ -1.72
PTM1YKL039W HUA2Q12134 243 aa4.28□□□□□ -1.72
PTM1YKL039W YMR230W-AQ3E7B5 62 aa4.28□□□□□ -1.72
PTM1YKL039W TOM1Q03280 3268 aa4.28□□□□□ -1.72
PTM1YKL039W PMS1P14242 873 aa4.27□□□□□ -1.73
PTM1YKL039W CMK1P27466 446 aaKnown RBP4.27□□□□□ -1.73
PTM1YKL039W RBA50Q04418 439 aa4.27□□□□□ -1.73
PTM1YKL039W FMP40Q08968 688 aaPredicted RBP4.27□□□□□ -1.73
PTM1YKL039W NMD4Q12129 218 aa4.27□□□□□ -1.73
PTM1YKL039W RPO41P13433 1351 aaKnown RBP4.27□□□□□ -1.73
PTM1YKL039W YBR144CP34215 104 aa4.27□□□□□ -1.73
PTM1YKL039W CAB3P36076 571 aa4.27□□□□□ -1.73
PTM1YKL039W RPL32P38061 130 aaKnown RBP4.27□□□□□ -1.73
PTM1YKL039W ICS2P38284 255 aa4.27□□□□□ -1.73
PTM1YKL039W FLC2P39719 783 aa4.27□□□□□ -1.73
PTM1YKL039W DIM1P41819 318 aaKnown RBP4.27□□□□□ -1.73
PTM1YKL039W RHO4Q00246 291 aa4.27□□□□□ -1.73
PTM1YKL039W THI20Q08224 551 aa4.27□□□□□ -1.73
PTM1YKL039W MRS3P10566 314 aa4.26□□□□□ -1.73
PTM1YKL039W TIF3P34167 436 aaKnown RBP4.26□□□□□ -1.73
PTM1YKL039W ECM15P35195 104 aa4.26□□□□□ -1.73
PTM1YKL039W AFG3P39925 761 aa4.26□□□□□ -1.73
PTM1YKL039W DSD1P53095 428 aa4.26□□□□□ -1.73
PTM1YKL039W DUG3P53871 357 aa4.26□□□□□ -1.73
PTM1YKL039W CRZ1P53968 678 aa4.26□□□□□ -1.73
PTM1YKL039W SAM50P53969 484 aa4.26□□□□□ -1.73
PTM1YKL039W YMR087WQ04299 284 aa4.26□□□□□ -1.73
PTM1YKL039W YTH1Q06102 208 aaPredicted RBP4.26□□□□□ -1.73
PTM1YKL039W NCE102Q12207 173 aaRIP-Chip data4.26□□□□□ -1.73not detected
PTM1YKL039W PDH1Q12428 516 aaKnown RBP4.26□□□□□ -1.73
PTM1YKL039W PHO2P07269 559 aa4.25□□□□□ -1.73
PTM1YKL039W UBP11P36026 717 aa4.25□□□□□ -1.73
PTM1YKL039W YJL068CP40363 299 aa4.25□□□□□ -1.73
PTM1YKL039W SNG1P46950 547 aa4.25□□□□□ -1.73
PTM1YKL039W YEH1Q07804 573 aa4.25□□□□□ -1.73
PTM1YKL039W YPT6Q99260 215 aa4.25□□□□□ -1.73
PTM1YKL039W YML002WP0CF17 737 aa4.24□□□□□ -1.73
PTM1YKL039W MRP13P12686 339 aa4.24□□□□□ -1.73
PTM1YKL039W PDA1P16387 420 aaKnown RBP4.24□□□□□ -1.73
PTM1YKL039W SGF29P25554 259 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms