RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	UBP2	Q01476	1272 aa		11.32	□□□□□ -0.6
TCD2	YKL027W	CTK1	Q03957	528 aa	Known RBP	11.32	□□□□□ -0.6
TCD2	YKL027W	YPL245W	Q12179	454 aa	Known RBP	11.32	□□□□□ -0.6
TCD2	YKL027W	GPR1	Q12361	961 aa		11.32	□□□□□ -0.6
TCD2	YKL027W	RNA1	P11745	407 aa	Known RBP	11.31	□□□□□ -0.6
TCD2	YKL027W	MVD1	P32377	396 aa	Known RBP	11.31	□□□□□ -0.6
TCD2	YKL027W	HXT4	P32467	576 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	GGC1	P38988	300 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	HXT6	P39003	570 aa	Known RBP	11.31	□□□□□ -0.6
TCD2	YKL027W	HXT7	P39004	570 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	ARB1	P40024	610 aa	Known RBP	11.31	□□□□□ -0.6
TCD2	YKL027W	FET5	P43561	622 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	YMR111C	Q04461	462 aa	Predicted RBP	11.31	□□□□□ -0.6
TCD2	YKL027W	GLO2	Q05584	274 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	UAF30	Q08747	228 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	YCL012C	Q8J0M4	134 aa		11.31	□□□□□ -0.6
TCD2	YKL027W	HXK2	P04807	486 aa	Known RBP	11.3	□□□□□ -0.6
TCD2	YKL027W	PRP6	P19735	899 aa	Predicted RBP	11.3	□□□□□ -0.6
TCD2	YKL027W	OCA4	P25366	362 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.3	□□□□□ -0.6	not detected
TCD2	YKL027W	CAF4	P36130	643 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	UTH1	P36135	365 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	ARA1	P38115	344 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	YBR071W	P38243	211 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	YHR033W	P38690	423 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	CEM1	P39525	442 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	ERV46	P39727	415 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	LTP1	P40347	161 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	HXT16	P47185	567 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	SGF73	P53165	657 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	HXT15	P54854	567 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	YEH2	Q07950	538 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	CMR1	Q12510	522 aa	Known RBP	11.3	□□□□□ -0.6
TCD2	YKL027W	MHT1	Q12525	324 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	SAS5	Q99314	248 aa		11.3	□□□□□ -0.6
TCD2	YKL027W	POL2	P21951	2222 aa	Known RBP	11.29	□□□□□ -0.6
TCD2	YKL027W	PRT1	P06103	763 aa	Known RBP	11.29	□□□□□ -0.6
TCD2	YKL027W	PHO87	P25360	923 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	RAD14	P28519	371 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	DEP1	P31385	405 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	DOM34	P33309	386 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	RLP7	P40693	322 aa	Known RBP	11.29	□□□□□ -0.6
TCD2	YKL027W	MTR3	P48240	250 aa	Predicted RBP	11.29	□□□□□ -0.6
TCD2	YKL027W	GIP3	Q03016	1276 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	SPC24	Q04477	213 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	EAF1	Q06337	982 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	OPT2	Q06593	877 aa		11.29	□□□□□ -0.6
TCD2	YKL027W	TRM1	P15565	570 aa	Known RBP	11.28	□□□□□ -0.6
TCD2	YKL027W	FUR1	P18562	216 aa	Known RBP	11.28	□□□□□ -0.6
TCD2	YKL027W	OXP1	P28273	1286 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	MEI5	P32489	222 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	CDC13	P32797	924 aa	Known RBP	11.28	□□□□□ -0.6
TCD2	YKL027W	PTC1	P35182	281 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	FRE2	P36033	711 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	YCR087C-A	P37263	153 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	YNR021W	P53723	404 aa	Known RBP	11.28	□□□□□ -0.6
TCD2	YKL027W	SDH1	Q00711	640 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	ECM11	Q04110	302 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	BNA5	Q05979	453 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	FAR10	Q06001	478 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	YLR413W	Q06689	675 aa		11.28	□□□□□ -0.6
TCD2	YKL027W	CMP2	P14747	604 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	SNF5	P18480	905 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	SGV1	P23293	657 aa	Known RBP	11.27	□□□□□ -0.61
TCD2	YKL027W	SPT16	P32558	1035 aa	Known RBP	11.27	□□□□□ -0.61
TCD2	YKL027W	SFC1	P33303	322 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	CUE2	P36075	443 aa	Known RBP	11.27	□□□□□ -0.61
TCD2	YKL027W	YBL029W	P38201	376 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	CAB2	P40506	365 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	TMA22	P47089	198 aa	Predicted RBP	11.27	□□□□□ -0.61
TCD2	YKL027W	GTO1	P48239	356 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	IMA1	P53051	589 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	KXD1	P53158	218 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	MPS1	P54199	764 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	PRP38	Q00723	242 aa	Predicted RBP	11.27	□□□□□ -0.61
TCD2	YKL027W	YDR124W	Q04608	324 aa		11.27	□□□□□ -0.61
TCD2	YKL027W	HTA2	P04912	132 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	RPS4A	P0CX35	261 aa	Known RBP	11.26	□□□□□ -0.61
TCD2	YKL027W	RPS4B	P0CX36	261 aa	Known RBP	11.26	□□□□□ -0.61
TCD2	YKL027W	PHO91	P27514	894 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	KKQ8	P36004	724 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	TSC10	P38342	320 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	LYS1	P38998	373 aa	RIP-Chip data	11.26	□□□□□ -0.61	not detected
TCD2	YKL027W	LRO1	P40345	661 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	YJL049W	P47048	450 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	USE1	P53146	245 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	YNL140C	P53910	189 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	GTR1	Q00582	310 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	IRC15	Q02733	499 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	MTQ2	Q03920	221 aa	Predicted RBP	11.26	□□□□□ -0.61
TCD2	YKL027W	GTB1	Q04924	702 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	HAL9	Q12180	1030 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	YOR114W	Q12219	294 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	RKM5	Q12367	367 aa		11.26	□□□□□ -0.61
TCD2	YKL027W	SEN1	Q00416	2231 aa	Known RBP	11.25	□□□□□ -0.61
TCD2	YKL027W	RPS21A	P0C0V8	87 aa	Known RBP	11.25	□□□□□ -0.61
TCD2	YKL027W	KIN2	P13186	1147 aa	Known RBP	11.25	□□□□□ -0.61
TCD2	YKL027W	FUN30	P31380	1131 aa		11.25	□□□□□ -0.61
TCD2	YKL027W	EMC3	P36039	253 aa		11.25	□□□□□ -0.61
TCD2	YKL027W	FTH1	P38310	465 aa		11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms