RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C MSC7P38694 644 aa3.5□□□□□ -1.85
SSM4YIL030C ETP1P38748 585 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C MNN9P39107 395 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C ZRG8P40021 1076 aa3.5□□□□□ -1.85
SSM4YIL030C FAR3P46671 204 aa3.5□□□□□ -1.85
SSM4YIL030C RPE1P46969 238 aa3.5□□□□□ -1.85
SSM4YIL030C CWC23P52868 283 aaPredicted RBP3.5□□□□□ -1.85
SSM4YIL030C NCS6P53088 359 aa3.5□□□□□ -1.85
SSM4YIL030C MPC1P53157 130 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C SHY1P53266 389 aa3.5□□□□□ -1.85
SSM4YIL030C PEX10Q05568 337 aa3.5□□□□□ -1.85
SSM4YIL030C JIP5Q06214 492 aaPredicted RBP3.5□□□□□ -1.85
SSM4YIL030C NOP12Q08208 459 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C ACF2Q12168 779 aa3.5□□□□□ -1.85
SSM4YIL030C YLL058WQ12198 575 aa3.5□□□□□ -1.85
SSM4YIL030C PET54P10834 293 aa3.5□□□□□ -1.85
SSM4YIL030C BRF1P29056 596 aa3.5□□□□□ -1.85
SSM4YIL030C CTF13P35203 478 aa3.5□□□□□ -1.85
SSM4YIL030C TEF4P36008 412 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C RFS1P38234 210 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C MPT5P39016 859 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85 RIP-Chip
SSM4YIL030C PRM9P39551 298 aa3.5□□□□□ -1.85
SSM4YIL030C DLD3P39976 496 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C YGR035CP53222 116 aa3.5□□□□□ -1.85
SSM4YIL030C YGR283CP53336 341 aaPredicted RBP3.5□□□□□ -1.85
SSM4YIL030C YPR084WQ06821 456 aa3.5□□□□□ -1.85
SSM4YIL030C NUS1Q12063 375 aa3.5□□□□□ -1.85
SSM4YIL030C MRH1Q12117 320 aaPredicted RBP3.5□□□□□ -1.85
SSM4YIL030C YAP1P19880 650 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C DBP2P24783 546 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C XDJ1P39102 459 aa3.49□□□□□ -1.85
SSM4YIL030C SPF1P39986 1215 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C HSH155P49955 971 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C ALT1P52893 592 aa3.49□□□□□ -1.85
SSM4YIL030C YGL235WP53071 178 aa3.49□□□□□ -1.85
SSM4YIL030C SMX3P54999 86 aaPredicted RBP3.49□□□□□ -1.85
SSM4YIL030C YDR109CQ04585 715 aa3.49□□□□□ -1.85
SSM4YIL030C GPM1P00950 247 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C HIS3P06633 220 aa3.49□□□□□ -1.85
SSM4YIL030C ENA1P13587 1091 aa3.49□□□□□ -1.85
SSM4YIL030C CLB3P24870 427 aa3.49□□□□□ -1.85
SSM4YIL030C RRP7P25368 297 aaPredicted RBP3.49□□□□□ -1.85
SSM4YIL030C ATG22P25568 528 aa3.49□□□□□ -1.85
SSM4YIL030C HXT3P32466 567 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C SFC1P33303 322 aa3.49□□□□□ -1.85
SSM4YIL030C EMC3P36039 253 aa3.49□□□□□ -1.85
SSM4YIL030C RBG1P39729 369 aa3.49□□□□□ -1.85
SSM4YIL030C IST3P40565 148 aaPredicted RBP3.49□□□□□ -1.85
SSM4YIL030C YJR154WP47181 346 aa3.49□□□□□ -1.85
SSM4YIL030C ALG11P53954 548 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C ENA2Q01896 1091 aa3.49□□□□□ -1.85
SSM4YIL030C PEX29Q03370 554 aa3.49□□□□□ -1.85
SSM4YIL030C STB3Q12427 513 aa3.49□□□□□ -1.85
SSM4YIL030C ENA5Q12691 1091 aa3.49□□□□□ -1.85
SSM4YIL030C YOR019WQ99248 730 aa3.49□□□□□ -1.85
SSM4YIL030C CKS1P20486 150 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C URE2P23202 354 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C DBP1P24784 617 aaKnown RBP3.49□□□□□ -1.85
SSM4YIL030C YCR102CP25608 368 aa3.49□□□□□ -1.85
SSM4YIL030C UTR4P32626 227 aa3.49□□□□□ -1.85
SSM4YIL030C SKG6P32900 734 aaPredicted RBP3.49□□□□□ -1.85
SSM4YIL030C RIM11P38615 370 aa3.49□□□□□ -1.85
SSM4YIL030C HRB1P38922 454 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SSM4YIL030C SSY5P47002 699 aa3.49□□□□□ -1.85
SSM4YIL030C IRC18P47056 224 aa3.49□□□□□ -1.85
SSM4YIL030C ARH1P48360 493 aa3.49□□□□□ -1.85
SSM4YIL030C AIF1P52923 378 aa3.49□□□□□ -1.85
SSM4YIL030C SLI1P53304 468 aa3.49□□□□□ -1.85
SSM4YIL030C IBD2P53892 351 aa3.49□□□□□ -1.85
SSM4YIL030C YPL014WQ02606 381 aa3.49□□□□□ -1.85
SSM4YIL030C RRN5Q02983 363 aa3.49□□□□□ -1.85
SSM4YIL030C APC4Q04601 652 aa3.49□□□□□ -1.85
SSM4YIL030C CRD1Q07560 283 aa3.49□□□□□ -1.85
SSM4YIL030C IPP1P00817 287 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C BUB2P26448 306 aaPredicted RBP3.48□□□□□ -1.85
SSM4YIL030C ZIP1P31111 875 aa3.48□□□□□ -1.85
SSM4YIL030C LST4P34239 828 aa3.48□□□□□ -1.85
SSM4YIL030C NAT2P37293 288 aa3.48□□□□□ -1.85
SSM4YIL030C POA1P38218 177 aa3.48□□□□□ -1.85
SSM4YIL030C NAB3P38996 802 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SSM4YIL030C PLB1P39105 664 aa3.48□□□□□ -1.85
SSM4YIL030C GID8P40208 455 aa3.48□□□□□ -1.85
SSM4YIL030C FKH2P41813 862 aa3.48□□□□□ -1.85
SSM4YIL030C YFL052WP43551 465 aa3.48□□□□□ -1.85
SSM4YIL030C YJL007CP47080 104 aa3.48□□□□□ -1.85
SSM4YIL030C MSE1P48525 536 aa3.48□□□□□ -1.85
SSM4YIL030C GTR2P53290 341 aa3.48□□□□□ -1.85
SSM4YIL030C SOK2P53438 785 aaPredicted RBP3.48□□□□□ -1.85
SSM4YIL030C YKR011CQ02209 353 aa3.48□□□□□ -1.85
SSM4YIL030C PLB2Q03674 706 aa3.48□□□□□ -1.85
SSM4YIL030C GSF2Q04697 403 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C RCO1Q04779 684 aa3.48□□□□□ -1.85
SSM4YIL030C YDL086WQ07505 273 aa3.48□□□□□ -1.85
SSM4YIL030C FLC1Q08967 793 aa3.48□□□□□ -1.85
SSM4YIL030C AEP3Q12089 606 aa3.48□□□□□ -1.85
SSM4YIL030C ICT1Q12385 394 aa3.48□□□□□ -1.85
SSM4YIL030C RAD7P06779 565 aa3.48□□□□□ -1.85
SSM4YIL030C CAF20P12962 161 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C IDH1P28834 360 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SSM4YIL030C HMT1P38074 348 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms