RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W YAL037WP39728 267 aa6.7□□□□□ -1.34
APE4YHR113W PTC2P39966 464 aaKnown RBP6.7□□□□□ -1.34
APE4YHR113W CAB2P40506 365 aa6.7□□□□□ -1.34
APE4YHR113W MDM34P53083 459 aa6.7□□□□□ -1.34
APE4YHR113W KXD1P53158 218 aa6.7□□□□□ -1.34
APE4YHR113W ERG26P53199 349 aaKnown RBP6.7□□□□□ -1.34
APE4YHR113W NOP19P53317 196 aaPredicted RBP6.7□□□□□ -1.34
APE4YHR113W CUS2P53830 285 aaPredicted RBP6.7□□□□□ -1.34
APE4YHR113W REX2P54964 269 aaKnown RBP6.7□□□□□ -1.34
APE4YHR113W CTK1Q03957 528 aaKnown RBP6.7□□□□□ -1.34
APE4YHR113W BNA5Q05979 453 aa6.7□□□□□ -1.34
APE4YHR113W YOL019WQ08157 551 aa6.7□□□□□ -1.34
APE4YHR113W HUA2Q12134 243 aa6.7□□□□□ -1.34
APE4YHR113W YPL245WQ12179 454 aaKnown RBP6.7□□□□□ -1.34
APE4YHR113W SUL2Q12325 893 aa6.7□□□□□ -1.34
APE4YHR113W BRR1Q99177 341 aaPredicted RBP6.7□□□□□ -1.34
APE4YHR113W HSH49Q99181 213 aaPredicted RBP6.7□□□□□ -1.34
APE4YHR113W MDM35O60200 86 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-DR4O74302 440 aa6.69□□□□□ -1.34
APE4YHR113W STE3P06783 470 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-HP0C2I4 478 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W RPL1AP0CX43 217 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W RPL1BP0CX44 217 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W TY1A-AP0CX57 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-PR1P0CX58 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-ORP0CX59 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-PR2P0CX60 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-DR5P0CX65 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-ER2P0CX66 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-GR3P0CX67 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-LR1P0CX68 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-MR2P0CX69 440 aa6.69□□□□□ -1.34
APE4YHR113W BUB2P26448 306 aaPredicted RBP6.69□□□□□ -1.34
APE4YHR113W TOA1P32773 286 aa6.69□□□□□ -1.34
APE4YHR113W ERP5P38819 212 aa6.69□□□□□ -1.34
APE4YHR113W NDE1P40215 560 aa6.69□□□□□ -1.34
APE4YHR113W SEC27P41811 889 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W FET5P43561 622 aa6.69□□□□□ -1.34
APE4YHR113W DUG1P43616 481 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W TY1A-JR2P47099 440 aa6.69□□□□□ -1.34
APE4YHR113W MPS2P53159 387 aa6.69□□□□□ -1.34
APE4YHR113W YNL010WP53981 241 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W TY1A-DR1Q03856 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-ML1Q04706 440 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W YMR034CQ05131 434 aaPredicted RBP6.69□□□□□ -1.34
APE4YHR113W RAD34Q06665 692 aa6.69□□□□□ -1.34
APE4YHR113W SLF1Q12034 447 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W TY1A-BRQ12217 440 aa6.69□□□□□ -1.34
APE4YHR113W YOR114WQ12219 294 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-NL2Q12470 440 aa6.69□□□□□ -1.34
APE4YHR113W TY1A-GR2Q12485 440 aa6.69□□□□□ -1.34
APE4YHR113W NOT5Q12514 560 aaPredicted RBP6.69□□□□□ -1.34
APE4YHR113W HRP1Q99383 534 aaKnown RBP6.69□□□□□ -1.34
APE4YHR113W PRT1P06103 763 aaKnown RBP6.68□□□□□ -1.34
APE4YHR113W CMP2P14747 604 aa6.68□□□□□ -1.34
APE4YHR113W PRP6P19735 899 aaPredicted RBP6.68□□□□□ -1.34
APE4YHR113W TYR1P20049 452 aa6.68□□□□□ -1.34
APE4YHR113W PRP4P20053 465 aaKnown RBP6.68□□□□□ -1.34
APE4YHR113W PEP12P32854 288 aa6.68□□□□□ -1.34
APE4YHR113W EMC3P36039 253 aa6.68□□□□□ -1.34
APE4YHR113W UTH1P36135 365 aa6.68□□□□□ -1.34
APE4YHR113W HEK2P38199 381 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
APE4YHR113W LYS1P38998 373 aaRIP-Chip data6.68□□□□□ -1.34not detected
APE4YHR113W MRX1P40050 688 aa6.68□□□□□ -1.34
APE4YHR113W GCD10P41814 478 aa6.68□□□□□ -1.34
APE4YHR113W LGE1Q02796 332 aaKnown RBP6.68□□□□□ -1.34
APE4YHR113W ATG34Q12292 412 aa6.68□□□□□ -1.34
APE4YHR113W YDR262WQ12331 272 aa6.68□□□□□ -1.34
APE4YHR113W RPS4AP0CX35 261 aaKnown RBP6.67□□□□□ -1.34
APE4YHR113W RPS4BP0CX36 261 aaKnown RBP6.67□□□□□ -1.34
APE4YHR113W SEC2P17065 759 aa6.67□□□□□ -1.34
APE4YHR113W TEC1P18412 486 aa6.67□□□□□ -1.34
APE4YHR113W HXT4P32467 576 aa6.67□□□□□ -1.34
APE4YHR113W SFC1P33303 322 aa6.67□□□□□ -1.34
APE4YHR113W RPS1AP33442 255 aaKnown RBP6.67□□□□□ -1.34
APE4YHR113W PTC1P35182 281 aa6.67□□□□□ -1.34
APE4YHR113W MRPL37P36532 105 aa6.67□□□□□ -1.34
APE4YHR113W YBL029WP38201 376 aa6.67□□□□□ -1.34
APE4YHR113W BMT2P38278 337 aa6.67□□□□□ -1.34
APE4YHR113W HXT6P39003 570 aaKnown RBP6.67□□□□□ -1.34
APE4YHR113W HXT7P39004 570 aa6.67□□□□□ -1.34
APE4YHR113W PLB1P39105 664 aa6.67□□□□□ -1.34
APE4YHR113W MEP2P41948 499 aa6.67□□□□□ -1.34
APE4YHR113W YFR020WP43600 232 aa6.67□□□□□ -1.34
APE4YHR113W YGR053CP53234 283 aa6.67□□□□□ -1.34
APE4YHR113W YNL140CP53910 189 aa6.67□□□□□ -1.34
APE4YHR113W MET31Q03081 177 aa6.67□□□□□ -1.34
APE4YHR113W VPS16Q03308 798 aa6.67□□□□□ -1.34
APE4YHR113W ESA1Q08649 445 aa6.67□□□□□ -1.34
APE4YHR113W HAL9Q12180 1030 aa6.67□□□□□ -1.34
APE4YHR113W YCL012CQ8J0M4 134 aa6.67□□□□□ -1.34
APE4YHR113W DST1P07273 309 aa6.66□□□□□ -1.34
APE4YHR113W LAT1P12695 482 aaKnown RBP6.66□□□□□ -1.34
APE4YHR113W VPS21P36017 210 aaKnown RBP6.66□□□□□ -1.34
APE4YHR113W APT2P36973 181 aa6.66□□□□□ -1.34
APE4YHR113W RRN10P38204 145 aa6.66□□□□□ -1.34
APE4YHR113W RFC3P38629 340 aa6.66□□□□□ -1.34
APE4YHR113W YHR033WP38690 423 aa6.66□□□□□ -1.34
APE4YHR113W MET18P40469 1032 aa6.66□□□□□ -1.34
APE4YHR113W AZF1P41696 914 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms