RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C MSC1Q03104 513 aa3.51□□□□□ -1.85
MSM1YGR171C PRP42Q03776 544 aaKnown RBP3.51□□□□□ -1.85
MSM1YGR171C RPS10AQ08745 105 aaPredicted RBP3.51□□□□□ -1.85
MSM1YGR171C FRE3Q08905 711 aa3.51□□□□□ -1.85
MSM1YGR171C CRC1Q12289 327 aa3.51□□□□□ -1.85
MSM1YGR171C UIP5P36137 443 aa3.5□□□□□ -1.85
MSM1YGR171C CFD1P40558 293 aa3.5□□□□□ -1.85
MSM1YGR171C PSA1P41940 361 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C RPS10BP46784 105 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C VTC3Q02725 835 aa3.5□□□□□ -1.85
MSM1YGR171C SOV1Q04748 898 aa3.5□□□□□ -1.85
MSM1YGR171C COQ9Q05779 260 aa3.5□□□□□ -1.85
MSM1YGR171C REX3Q12090 404 aa3.5□□□□□ -1.85
MSM1YGR171C PUT2P07275 575 aa3.5□□□□□ -1.85
MSM1YGR171C RPL31BP0C2H9 113 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C PPH22P23595 377 aa3.5□□□□□ -1.85
MSM1YGR171C ELO2P25358 347 aa3.5□□□□□ -1.85
MSM1YGR171C GAC1P28006 793 aa3.5□□□□□ -1.85
MSM1YGR171C SSE1P32589 693 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C RML2P32611 393 aa3.5□□□□□ -1.85
MSM1YGR171C MTR2P34232 184 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C GDT1P38301 280 aaPredicted RBP3.5□□□□□ -1.85
MSM1YGR171C YHR218WP38899 603 aa3.5□□□□□ -1.85
MSM1YGR171C VPS25P47142 202 aa3.5□□□□□ -1.85
MSM1YGR171C TCB2P48231 1178 aa3.5□□□□□ -1.85
MSM1YGR171C LYS20P48570 428 aaKnown RBP3.5□□□□□ -1.85
MSM1YGR171C CUL3P53202 744 aa3.5□□□□□ -1.85
MSM1YGR171C ASI1P54074 624 aa3.5□□□□□ -1.85
MSM1YGR171C DON1Q05610 365 aa3.5□□□□□ -1.85
MSM1YGR171C ATG26Q06321 1198 aa3.5□□□□□ -1.85
MSM1YGR171C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
MSM1YGR171C MLH2Q07980 695 aa3.5□□□□□ -1.85
MSM1YGR171C NFI1Q12216 726 aa3.5□□□□□ -1.85
MSM1YGR171C FRE6Q12473 712 aa3.5□□□□□ -1.85
MSM1YGR171C SKS1Q12505 502 aa3.5□□□□□ -1.85
MSM1YGR171C PTP1P25044 335 aa3.49□□□□□ -1.85
MSM1YGR171C YME2P32843 850 aa3.49□□□□□ -1.85
MSM1YGR171C TUL1P36096 758 aa3.49□□□□□ -1.85
MSM1YGR171C SCO2P38072 301 aa3.49□□□□□ -1.85
MSM1YGR171C FLO5P38894 1075 aa3.49□□□□□ -1.85
MSM1YGR171C CAK1P43568 368 aaPredicted RBP3.49□□□□□ -1.85
MSM1YGR171C BNA3P47039 444 aaKnown RBP3.49□□□□□ -1.85
MSM1YGR171C YPT11P48559 417 aa3.49□□□□□ -1.85
MSM1YGR171C YGR126WP53274 230 aa3.49□□□□□ -1.85
MSM1YGR171C TAP42Q04372 366 aa3.49□□□□□ -1.85
MSM1YGR171C ADE13Q05911 482 aaKnown RBP3.49□□□□□ -1.85
MSM1YGR171C GPM3Q12326 303 aa3.49□□□□□ -1.85
MSM1YGR171C QCR6P00127 147 aa3.48□□□□□ -1.85
MSM1YGR171C PRP2P20095 876 aaPredicted RBP3.48□□□□□ -1.85
MSM1YGR171C DAL80P26343 269 aa3.48□□□□□ -1.85
MSM1YGR171C LAS1P36146 502 aaPredicted RBP3.48□□□□□ -1.85
MSM1YGR171C DAD2P36162 133 aa3.48□□□□□ -1.85
MSM1YGR171C STV1P37296 890 aa3.48□□□□□ -1.85
MSM1YGR171C ARP1P38696 384 aa3.48□□□□□ -1.85
MSM1YGR171C UBA4P38820 440 aa3.48□□□□□ -1.85
MSM1YGR171C TOM71P38825 639 aaKnown RBP3.48□□□□□ -1.85
MSM1YGR171C RTT105P40063 208 aa3.48□□□□□ -1.85
MSM1YGR171C VMA13P41807 478 aaKnown RBP3.48□□□□□ -1.85
MSM1YGR171C SEC27P41811 889 aaKnown RBP3.48□□□□□ -1.85
MSM1YGR171C ALK1P43633 760 aaKnown RBP3.48□□□□□ -1.85
MSM1YGR171C NET1P47035 1189 aa3.48□□□□□ -1.85
MSM1YGR171C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
MSM1YGR171C YPL107WQ02873 248 aa3.48□□□□□ -1.85
MSM1YGR171C RSF1Q05043 376 aa3.48□□□□□ -1.85
MSM1YGR171C YDL057WQ07379 328 aa3.48□□□□□ -1.85
MSM1YGR171C PLP2Q12017 286 aa3.48□□□□□ -1.85
MSM1YGR171C CTF3Q12748 733 aa3.48□□□□□ -1.85
MSM1YGR171C RPL6BP05739 176 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C SNF3P10870 884 aa3.47□□□□□ -1.85
MSM1YGR171C PHO84P25297 587 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C SNT1P25357 1226 aa3.47□□□□□ -1.85
MSM1YGR171C IDH2P28241 369 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C RAD14P28519 371 aa3.47□□□□□ -1.85
MSM1YGR171C NTC20P38302 140 aaPredicted RBP3.47□□□□□ -1.85
MSM1YGR171C VRG4P40107 337 aa3.47□□□□□ -1.85
MSM1YGR171C RPL6AQ02326 176 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C YMR160WQ03823 816 aa3.47□□□□□ -1.85
MSM1YGR171C CAC2Q04199 468 aa3.47□□□□□ -1.85
MSM1YGR171C MGR3Q04472 501 aa3.47□□□□□ -1.85
MSM1YGR171C ARP10Q04549 284 aa3.47□□□□□ -1.85
MSM1YGR171C SPE3Q12074 293 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C RPB8P20436 146 aa3.47□□□□□ -1.85
MSM1YGR171C RRP7P25368 297 aaPredicted RBP3.47□□□□□ -1.85
MSM1YGR171C MSP1P28737 362 aa3.47□□□□□ -1.85
MSM1YGR171C GYP6P32806 458 aa3.47□□□□□ -1.85
MSM1YGR171C NIP100P33420 868 aa3.47□□□□□ -1.85
MSM1YGR171C SHP1P34223 423 aa3.47□□□□□ -1.85
MSM1YGR171C RRP1P35178 278 aaPredicted RBP3.47□□□□□ -1.85
MSM1YGR171C ROT2P38138 954 aa3.47□□□□□ -1.85
MSM1YGR171C MBB1P39534 108 aa3.47□□□□□ -1.85
MSM1YGR171C YIL060WP40519 144 aa3.47□□□□□ -1.85
MSM1YGR171C ATG27P46989 271 aa3.47□□□□□ -1.85
MSM1YGR171C AIM22P47051 409 aa3.47□□□□□ -1.85
MSM1YGR171C FMS1P50264 508 aa3.47□□□□□ -1.85
MSM1YGR171C PYK2P52489 506 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C YGL138CP53122 345 aa3.47□□□□□ -1.85
MSM1YGR171C YGR111WP53265 400 aa3.47□□□□□ -1.85
MSM1YGR171C DUG3P53871 357 aa3.47□□□□□ -1.85
MSM1YGR171C RRP45Q05636 305 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C MCP2Q06567 569 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms