RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MDM20Q12387 796 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W PAR32Q12515 295 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W PNO1Q99216 274 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W FAS2P19097 1887 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W ILS1P09436 1072 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W EXO70P19658 623 aa4.3□□□□□ -1.72
PRE9YGR135W VPS33P20795 691 aa4.3□□□□□ -1.72
PRE9YGR135W PEX1P24004 1043 aa4.3□□□□□ -1.72
PRE9YGR135W CAD1P24813 409 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W AAD3P25612 363 aa4.3□□□□□ -1.72
PRE9YGR135W POL4P25615 582 aa4.3□□□□□ -1.72
PRE9YGR135W DCG1P32460 244 aa4.3□□□□□ -1.72
PRE9YGR135W RPN2P32565 945 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W DBP7P36120 742 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W UBP13P38187 747 aa4.3□□□□□ -1.72
PRE9YGR135W YBP1P38315 674 aa4.3□□□□□ -1.72
PRE9YGR135W TSC10P38342 320 aa4.3□□□□□ -1.72
PRE9YGR135W PES4P39684 611 aa4.3□□□□□ -1.72
PRE9YGR135W ARB1P40024 610 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W JHD1P40034 492 aa4.3□□□□□ -1.72
PRE9YGR135W DOT5P40553 215 aa4.3□□□□□ -1.72
PRE9YGR135W YFH7P43591 353 aa4.3□□□□□ -1.72
PRE9YGR135W YJL055WP47044 245 aa4.3□□□□□ -1.72
PRE9YGR135W AAD10P47182 288 aa4.3□□□□□ -1.72
PRE9YGR135W MSE1P48525 536 aa4.3□□□□□ -1.72
PRE9YGR135W GLO1P50107 326 aa4.3□□□□□ -1.72
PRE9YGR135W NCS6P53088 359 aa4.3□□□□□ -1.72
PRE9YGR135W SGF73P53165 657 aa4.3□□□□□ -1.72
PRE9YGR135W MTL1P53214 551 aa4.3□□□□□ -1.72
PRE9YGR135W DAK1P54838 584 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W FDC1Q03034 503 aa4.3□□□□□ -1.72
PRE9YGR135W IRC4Q03036 179 aa4.3□□□□□ -1.72
PRE9YGR135W YMR027WQ04371 470 aa4.3□□□□□ -1.72
PRE9YGR135W FUS2Q05670 677 aa4.3□□□□□ -1.72
PRE9YGR135W RIX7Q07844 837 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W YOR389WQ08912 624 aa4.3□□□□□ -1.72
PRE9YGR135W PGC1Q08959 321 aa4.3□□□□□ -1.72
PRE9YGR135W VIK1Q12045 647 aa4.3□□□□□ -1.72
PRE9YGR135W SMF3Q12078 473 aaPredicted RBP4.3□□□□□ -1.72
PRE9YGR135W SGT2Q12118 346 aaKnown RBP4.3□□□□□ -1.72
PRE9YGR135W IES3Q12345 250 aa4.3□□□□□ -1.72
PRE9YGR135W NPC2Q12408 173 aa4.3□□□□□ -1.72
PRE9YGR135W FIG2P25653 1609 aa4.29□□□□□ -1.72
PRE9YGR135W YRF1-3P0CX14 1859 aa4.29□□□□□ -1.72
PRE9YGR135W YRF1-7P0CX15 1859 aa4.29□□□□□ -1.72
PRE9YGR135W YRF1-6P53819 1859 aa4.29□□□□□ -1.72
PRE9YGR135W PGK1P00560 416 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W SEC63P14906 663 aa4.29□□□□□ -1.72
PRE9YGR135W MRPL25P23369 157 aa4.29□□□□□ -1.72
PRE9YGR135W CLB3P24870 427 aa4.29□□□□□ -1.72
PRE9YGR135W STE50P25344 346 aa4.29□□□□□ -1.72
PRE9YGR135W RRT12P25381 491 aa4.29□□□□□ -1.72
PRE9YGR135W FEN2P25621 512 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W ADK2P26364 225 aa4.29□□□□□ -1.72
PRE9YGR135W DSS4P32601 143 aa4.29□□□□□ -1.72
PRE9YGR135W GCS1P35197 352 aa4.29□□□□□ -1.72
PRE9YGR135W STB6P36085 766 aa4.29□□□□□ -1.72
PRE9YGR135W PIG2P40187 538 aa4.29□□□□□ -1.72
PRE9YGR135W YMR134WP40207 237 aa4.29□□□□□ -1.72
PRE9YGR135W LCB2P40970 561 aa4.29□□□□□ -1.72
PRE9YGR135W FKH2P41813 862 aa4.29□□□□□ -1.72
PRE9YGR135W DIM1P41819 318 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W LIA1P47120 325 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W GPI8P49018 411 aa4.29□□□□□ -1.72
PRE9YGR135W VID30P53076 958 aa4.29□□□□□ -1.72
PRE9YGR135W LCL3P53153 274 aa4.29□□□□□ -1.72
PRE9YGR135W YGR054WP53235 642 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W RPT4P53549 437 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W VPS9P54787 451 aa4.29□□□□□ -1.72
PRE9YGR135W MUB1Q03162 620 aa4.29□□□□□ -1.72
PRE9YGR135W AIM33Q04516 312 aa4.29□□□□□ -1.72
PRE9YGR135W CRF1Q04930 467 aa4.29□□□□□ -1.72
PRE9YGR135W YLR345WQ06137 509 aa4.29□□□□□ -1.72
PRE9YGR135W YLH47Q06493 454 aa4.29□□□□□ -1.72
PRE9YGR135W YFT2Q06676 274 aa4.29□□□□□ -1.72
PRE9YGR135W SNX3Q08826 162 aaKnown RBP4.29□□□□□ -1.72
PRE9YGR135W NOT5Q12514 560 aaPredicted RBP4.29□□□□□ -1.72
PRE9YGR135W FLO1P32768 1537 aa4.29□□□□□ -1.72
PRE9YGR135W FLO11P08640 1367 aa4.28□□□□□ -1.72
PRE9YGR135W YPR089WO13585 888 aa4.28□□□□□ -1.72
PRE9YGR135W STF1P01098 86 aa4.28□□□□□ -1.72
PRE9YGR135W PMA1P05030 918 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W CMD1P06787 147 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W TRX1P22217 103 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W KAR4P25583 335 aa4.28□□□□□ -1.72
PRE9YGR135W PEX2P32800 271 aa4.28□□□□□ -1.72
PRE9YGR135W SIP2P34164 415 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W UBP11P36026 717 aa4.28□□□□□ -1.72
PRE9YGR135W CCL1P37366 393 aa4.28□□□□□ -1.72
PRE9YGR135W FES1P38260 290 aa4.28□□□□□ -1.72
PRE9YGR135W POP4P38336 279 aa4.28□□□□□ -1.72
PRE9YGR135W DIA4P38705 446 aaPredicted RBP4.28□□□□□ -1.72
PRE9YGR135W TRM5P38793 499 aa4.28□□□□□ -1.72
PRE9YGR135W PEX18P38855 283 aa4.28□□□□□ -1.72
PRE9YGR135W PLB1P39105 664 aa4.28□□□□□ -1.72
PRE9YGR135W AFG3P39925 761 aa4.28□□□□□ -1.72
PRE9YGR135W MEP1P40260 492 aa4.28□□□□□ -1.72
PRE9YGR135W ASG1P40467 964 aa4.28□□□□□ -1.72
PRE9YGR135W SEC28P40509 296 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W MAM33P40513 266 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms