RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W MRPL17P36528 281 aa3.62□□□□□ -1.83
SPT6YGR116W VID24P38263 362 aa3.62□□□□□ -1.83
SPT6YGR116W GIP4P39732 760 aa3.62□□□□□ -1.83
SPT6YGR116W SOK1P40317 901 aa3.62□□□□□ -1.83
SPT6YGR116W YGR168CP53293 376 aa3.62□□□□□ -1.83
SPT6YGR116W COS1P53822 381 aa3.62□□□□□ -1.83
SPT6YGR116W RMI1Q02685 241 aa3.62□□□□□ -1.83
SPT6YGR116W YPL034WQ03083 165 aa3.62□□□□□ -1.83
SPT6YGR116W MAK3Q03503 176 aa3.62□□□□□ -1.83
SPT6YGR116W ECM7Q06200 448 aa3.62□□□□□ -1.83
SPT6YGR116W VPS74Q06385 345 aa3.62□□□□□ -1.83
SPT6YGR116W APC5Q08683 685 aa3.62□□□□□ -1.83
SPT6YGR116W REC8Q12188 680 aa3.62□□□□□ -1.83
SPT6YGR116W AHA1Q12449 350 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W SUC2P00724 532 aa3.61□□□□□ -1.83
SPT6YGR116W URA3P03962 267 aa3.61□□□□□ -1.83
SPT6YGR116W PHO4P07270 312 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W SPS1P08458 490 aa3.61□□□□□ -1.83
SPT6YGR116W ASP3-2P0CX77 362 aa3.61□□□□□ -1.83
SPT6YGR116W ASP3-3P0CX78 362 aa3.61□□□□□ -1.83
SPT6YGR116W ASP3-4P0CX79 362 aa3.61□□□□□ -1.83
SPT6YGR116W ASP3-1P0CZ17 362 aa3.61□□□□□ -1.83
SPT6YGR116W AAT2P23542 418 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W CAM1P29547 415 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W ATP3P38077 311 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W GRE3P38715 327 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SPT6YGR116W COA1P40452 197 aa3.61□□□□□ -1.83
SPT6YGR116W NUP116Q02630 1113 aa3.61□□□□□ -1.83
SPT6YGR116W YML131WQ03102 365 aa3.61□□□□□ -1.83
SPT6YGR116W MZM1Q03429 123 aaPredicted RBP3.61□□□□□ -1.83
SPT6YGR116W RCO1Q04779 684 aa3.61□□□□□ -1.83
SPT6YGR116W RQC1Q05468 723 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W NBA1Q08229 501 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W SYC1Q08553 188 aaPredicted RBP3.61□□□□□ -1.83
SPT6YGR116W SUS1Q6WNK7 96 aa3.61□□□□□ -1.83
SPT6YGR116W PHR1P05066 565 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SPT6YGR116W DED1P06634 604 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W PMI40P29952 429 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W PDR3P33200 976 aa3.61□□□□□ -1.83
SPT6YGR116W CAF4P36130 643 aa3.61□□□□□ -1.83
SPT6YGR116W TVP38P36164 337 aa3.61□□□□□ -1.83
SPT6YGR116W BIG1P38813 335 aa3.61□□□□□ -1.83
SPT6YGR116W HAT2P39984 401 aa3.61□□□□□ -1.83
SPT6YGR116W YEL025CP39991 1188 aa3.61□□□□□ -1.83
SPT6YGR116W YER156CP40093 338 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W ALT1P52893 592 aa3.61□□□□□ -1.83
SPT6YGR116W HXT11P54862 567 aa3.61□□□□□ -1.83
SPT6YGR116W YML020WQ03722 664 aa3.61□□□□□ -1.83
SPT6YGR116W ENT5Q03769 411 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W AAD4Q07747 329 aa3.61□□□□□ -1.83
SPT6YGR116W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SPT6YGR116W RIF1P29539 1916 aa3.61□□□□□ -1.83
SPT6YGR116W GCN4P03069 281 aa3.61□□□□□ -1.83
SPT6YGR116W YGL041W-AP0C5N3 154 aa3.61□□□□□ -1.83
SPT6YGR116W RPP1BP10622 106 aaKnown RBP3.61□□□□□ -1.83
SPT6YGR116W VBA3P25594 458 aa3.61□□□□□ -1.83
SPT6YGR116W PET309P32522 965 aaPredicted RBP3.61□□□□□ -1.83
SPT6YGR116W VPS51P36116 164 aa3.61□□□□□ -1.83
SPT6YGR116W VBA5P36172 582 aa3.61□□□□□ -1.83
SPT6YGR116W MRP21P38175 177 aa3.61□□□□□ -1.83
SPT6YGR116W HSL7P38274 827 aa3.61□□□□□ -1.83
SPT6YGR116W LEU5P38702 357 aa3.61□□□□□ -1.83
SPT6YGR116W NTA1P40354 457 aa3.61□□□□□ -1.83
SPT6YGR116W RRT5P43607 289 aa3.61□□□□□ -1.83
SPT6YGR116W SSY5P47002 699 aa3.61□□□□□ -1.83
SPT6YGR116W GTO1P48239 356 aa3.61□□□□□ -1.83
SPT6YGR116W NAS6P50086 228 aa3.61□□□□□ -1.83
SPT6YGR116W CWC24P53769 259 aa3.61□□□□□ -1.83
SPT6YGR116W IBD2P53892 351 aa3.61□□□□□ -1.83
SPT6YGR116W EFM6P53970 246 aa3.61□□□□□ -1.83
SPT6YGR116W YAT1P80235 687 aa3.61□□□□□ -1.83
SPT6YGR116W PEX13P80667 386 aa3.61□□□□□ -1.83
SPT6YGR116W SPR6Q01684 191 aa3.61□□□□□ -1.83
SPT6YGR116W MET14Q02196 202 aa3.61□□□□□ -1.83
SPT6YGR116W YPL071CQ02864 156 aa3.61□□□□□ -1.83
SPT6YGR116W SPP1Q03012 353 aa3.61□□□□□ -1.83
SPT6YGR116W SCS7Q03529 384 aa3.61□□□□□ -1.83
SPT6YGR116W YMR010WQ03687 405 aa3.61□□□□□ -1.83
SPT6YGR116W MCD1Q12158 566 aa3.61□□□□□ -1.83
SPT6YGR116W PNS1Q12412 539 aa3.61□□□□□ -1.83
SPT6YGR116W ERG20P08524 352 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W HXT2P23585 541 aa3.6□□□□□ -1.83
SPT6YGR116W PMT2P31382 759 aa3.6□□□□□ -1.83
SPT6YGR116W UTR2P32623 467 aa3.6□□□□□ -1.83
SPT6YGR116W FRE1P32791 686 aa3.6□□□□□ -1.83
SPT6YGR116W HIS7P33734 552 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W JEN1P36035 616 aa3.6□□□□□ -1.83
SPT6YGR116W SDS22P36047 338 aa3.6□□□□□ -1.83
SPT6YGR116W YBR056WP38081 501 aa3.6□□□□□ -1.83
SPT6YGR116W PPE1P38796 400 aa3.6□□□□□ -1.83
SPT6YGR116W BFR1P38934 470 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83 RIP-Chip
SPT6YGR116W MSS4P38994 779 aa3.6□□□□□ -1.83
SPT6YGR116W ISC1P40015 477 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W VHR2P40041 505 aa3.6□□□□□ -1.83
SPT6YGR116W BUR6P40096 142 aa3.6□□□□□ -1.83
SPT6YGR116W YKE4P40544 346 aa3.6□□□□□ -1.83
SPT6YGR116W UBC12P52491 188 aa3.6□□□□□ -1.83
SPT6YGR116W ARP4P80428 489 aa3.6□□□□□ -1.83
SPT6YGR116W CWC21Q03375 135 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W SKY1Q03656 742 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms